Search of human proteins with 51036594

Search of human proteins with 51036594

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|51036594 potassium channel tetramerisation domain containing
11 [Homo sapiens]
         (232 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|51036594 potassium channel tetramerisation domain containing ...   477   e-135
gi|71143104 potassium channel tetramerisation domain containing ...   153   1e-37
gi|189571693 potassium channel tetramerisation domain containing...    74   1e-13
gi|189571691 potassium channel tetramerisation domain containing...    74   1e-13
gi|146198864 potassium channel tetramerisation domain containing...    72   4e-13
gi|194018443 potassium channel tetramerisation domain containing...    59   4e-09
gi|194018441 potassium channel tetramerisation domain containing...    59   4e-09
gi|194018439 potassium channel tetramerisation domain containing...    59   4e-09
gi|218505694 potassium channel tetramerisation domain containing...    58   8e-09
gi|209969708 potassium channel tetramerisation domain containing...    58   8e-09
gi|40217617 potassium channel tetramerisation domain containing ...    58   8e-09
gi|23308551 potassium channel tetramerisation domain containing ...    54   9e-08
gi|155369221 potassium channel tetramerisation domain containing...    52   6e-07
gi|40807368 potassium channel regulator isoform 2 [Homo sapiens]       50   1e-06
gi|27734697 potassium channel regulator isoform 1 [Homo sapiens]       50   1e-06
gi|55926200 potassium channel tetramerisation domain containing ...    49   3e-06
gi|19923973 potassium channel tetramerisation domain containing ...    49   4e-06
gi|169234778 potassium channel tetramerisation domain containing...    45   4e-05
gi|38198663 potassium channel tetramerisation domain containing ...    45   4e-05
gi|46255026 potassium channel tetramerisation domain containing ...    45   4e-05
gi|223005950 SH3KBP1 binding protein 1 [Homo sapiens]                  43   2e-04
gi|27436981 potassium voltage-gated channel, Shal-related subfam...    42   3e-04
gi|30578412 potassium channel tetramerisation domain containing ...    42   3e-04
gi|53829365 potassium channel tetramerisation domain containing ...    41   0.001
gi|9506651 potassium channel tetramerisation domain containing 5...    40   0.001
gi|13994353 potassium channel tetramerisation domain containing ...    40   0.001
gi|9789987 potassium voltage-gated channel, Shal-related subfami...    39   0.003
gi|142356950 potassium channel tetramerisation domain containing...    39   0.003
gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo...    38   0.006
gi|27436984 potassium voltage-gated channel, Shal-related subfam...    38   0.008

>gi|51036594 potassium channel tetramerisation domain containing 11
           [Homo sapiens]
          Length = 232

 Score =  477 bits (1228), Expect = e-135
 Identities = 232/232 (100%), Positives = 232/232 (100%)

Query: 1   MLGAMFRAGTPMPPNLNSQGGGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAE 60
           MLGAMFRAGTPMPPNLNSQGGGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAE
Sbjct: 1   MLGAMFRAGTPMPPNLNSQGGGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAE 60

Query: 61  ADFYQIRPLLDALRELEASQGTPAPTAALLHADVDVSPRLVHFSARRGPHHYELSSVQVD 120
           ADFYQIRPLLDALRELEASQGTPAPTAALLHADVDVSPRLVHFSARRGPHHYELSSVQVD
Sbjct: 61  ADFYQIRPLLDALRELEASQGTPAPTAALLHADVDVSPRLVHFSARRGPHHYELSSVQVD 120

Query: 121 TFRANLFCTDSECLGALRARFGVASGDRAEGSPHFHLEWAPRPVELPEVEYGRLGLQPLW 180
           TFRANLFCTDSECLGALRARFGVASGDRAEGSPHFHLEWAPRPVELPEVEYGRLGLQPLW
Sbjct: 121 TFRANLFCTDSECLGALRARFGVASGDRAEGSPHFHLEWAPRPVELPEVEYGRLGLQPLW 180

Query: 181 TGGPGERREVVGTPSFLEEVLRVALEHGFRLDSVFPDPEDLLNSRSLRFVRH 232
           TGGPGERREVVGTPSFLEEVLRVALEHGFRLDSVFPDPEDLLNSRSLRFVRH
Sbjct: 181 TGGPGERREVVGTPSFLEEVLRVALEHGFRLDSVFPDPEDLLNSRSLRFVRH 232


>gi|71143104 potassium channel tetramerisation domain containing 21
           [Homo sapiens]
          Length = 260

 Score =  153 bits (386), Expect = 1e-37
 Identities = 93/239 (38%), Positives = 132/239 (55%), Gaps = 14/239 (5%)

Query: 1   MLGAMFRAGTPMPPNLNSQGGGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAE 60
           MLGAMF     MP   +SQG  + FIDRDGK FR+ILNFLR   LDLP  + E  LLR E
Sbjct: 28  MLGAMFSG--KMPTKRDSQG--NCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRRE 83

Query: 61  ADFYQIRPLLDALRELEASQGTPAPTAALLHADVDVSPRLVHFSARRGPHHYELSSVQVD 120
           ADFYQ++PL++AL+E E  + + A   A+L+  ++   + VHF+ R  P  Y LSS  ++
Sbjct: 84  ADFYQVQPLIEALQEKEV-ELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSSME 142

Query: 121 TFRANLFCTDSECLGALRARFGVASG-------DRAEGSPHFHLEWAPRPVELPEVEYGR 173
            F AN+F T    L  L ++    S           +   H  L+W      LPE EY +
Sbjct: 143 VFNANIFSTSCLFLKLLGSKLFYCSNGNLSSITSHLQDPNHLTLDWVANVEGLPEEEYTK 202

Query: 174 LGLQPLWTGGPGERREVVGTPSFLEEVLRVALEHGFRLDSVFPDPEDLLNSRSLRFVRH 232
             L+ LW       +++     F+EEVL++AL  GF +DS  P   D +N++ +R +R+
Sbjct: 203 QNLKRLWV--VPANKQINSFQVFVEEVLKIALSDGFCIDSSHPHALDFMNNKIIRLIRY 259


>gi|189571693 potassium channel tetramerisation domain containing 6
           [Homo sapiens]
          Length = 237

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 41/75 (54%), Positives = 48/75 (64%), Gaps = 4/75 (5%)

Query: 1   MLGAMFRAGTPMPPNLNSQGGGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAE 60
           MLGAMF  G   P   + QG  +YFIDRDG  FR++LNFLR   L LP  + E  LLR E
Sbjct: 37  MLGAMF--GGDFPTARDPQG--NYFIDRDGPLFRYVLNFLRTSELTLPLDFKEFDLLRKE 92

Query: 61  ADFYQIRPLLDALRE 75
           ADFYQI PL+  L +
Sbjct: 93  ADFYQIEPLIQCLND 107


>gi|189571691 potassium channel tetramerisation domain containing 6
           [Homo sapiens]
          Length = 237

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 41/75 (54%), Positives = 48/75 (64%), Gaps = 4/75 (5%)

Query: 1   MLGAMFRAGTPMPPNLNSQGGGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAE 60
           MLGAMF  G   P   + QG  +YFIDRDG  FR++LNFLR   L LP  + E  LLR E
Sbjct: 37  MLGAMF--GGDFPTARDPQG--NYFIDRDGPLFRYVLNFLRTSELTLPLDFKEFDLLRKE 92

Query: 61  ADFYQIRPLLDALRE 75
           ADFYQI PL+  L +
Sbjct: 93  ADFYQIEPLIQCLND 107


>gi|146198864 potassium channel tetramerisation domain containing 4
           [Homo sapiens]
          Length = 259

 Score = 72.0 bits (175), Expect = 4e-13
 Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 24/133 (18%)

Query: 22  GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDALR-ELEASQ 80
           GHYFIDRDG  FRH+LNFLR G L LP G+ E  LL  EA+F+Q++ L + ++   E  Q
Sbjct: 75  GHYFIDRDGLLFRHVLNFLRNGELLLPEGFRENQLLAQEAEFFQLKGLAEEVKSRWEKEQ 134

Query: 81  GTPAPTAALLHADVDVSPRLVHFSARRGPHHYELSSVQVDTFRANLFCTDSECLGALRAR 140
            TP  T  L   D                +H     +++       FC   + +  +++R
Sbjct: 135 LTPRETTFLEITD----------------NHDRSQGLRI-------FCNAPDFISKIKSR 171

Query: 141 FGVASGDRAEGSP 153
             + S  R +G P
Sbjct: 172 IVLVSKSRLDGFP 184


>gi|194018443 potassium channel tetramerisation domain containing 15
           isoform 2 [Homo sapiens]
          Length = 283

 Score = 58.9 bits (141), Expect = 4e-09
 Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 3/58 (5%)

Query: 23  HYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDALRELEASQ 80
           HYFIDRDG+ FR++L+FLR  +L LP  + + +LL  EA +YQ++P+   +RELE  Q
Sbjct: 100 HYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM---VRELERWQ 154


>gi|194018441 potassium channel tetramerisation domain containing 15
           isoform 2 [Homo sapiens]
          Length = 283

 Score = 58.9 bits (141), Expect = 4e-09
 Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 3/58 (5%)

Query: 23  HYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDALRELEASQ 80
           HYFIDRDG+ FR++L+FLR  +L LP  + + +LL  EA +YQ++P+   +RELE  Q
Sbjct: 100 HYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM---VRELERWQ 154


>gi|194018439 potassium channel tetramerisation domain containing 15
           isoform 1 [Homo sapiens]
          Length = 234

 Score = 58.9 bits (141), Expect = 4e-09
 Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 3/58 (5%)

Query: 23  HYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDALRELEASQ 80
           HYFIDRDG+ FR++L+FLR  +L LP  + + +LL  EA +YQ++P+   +RELE  Q
Sbjct: 100 HYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM---VRELERWQ 154


>gi|218505694 potassium channel tetramerisation domain containing 1
           isoform b [Homo sapiens]
          Length = 865

 Score = 57.8 bits (138), Expect = 8e-09
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query: 23  HYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLL 70
           HYFIDRDG+ FR+ILNFLR  +L +P  + +  LL  EA ++Q++P+L
Sbjct: 682 HYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 729


>gi|209969708 potassium channel tetramerisation domain containing 1
           isoform a [Homo sapiens]
          Length = 257

 Score = 57.8 bits (138), Expect = 8e-09
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query: 23  HYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLL 70
           HYFIDRDG+ FR+ILNFLR  +L +P  + +  LL  EA ++Q++P+L
Sbjct: 74  HYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121


>gi|40217617 potassium channel tetramerisation domain containing 1
           isoform a [Homo sapiens]
          Length = 257

 Score = 57.8 bits (138), Expect = 8e-09
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query: 23  HYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLL 70
           HYFIDRDG+ FR+ILNFLR  +L +P  + +  LL  EA ++Q++P+L
Sbjct: 74  HYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPML 121


>gi|23308551 potassium channel tetramerisation domain containing 7
           [Homo sapiens]
          Length = 289

 Score = 54.3 bits (129), Expect = 9e-08
 Identities = 51/166 (30%), Positives = 73/166 (43%), Gaps = 12/166 (7%)

Query: 1   MLGAMFRAGTPMPPNLNSQGGGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAE 60
           ML AMF     +P    +   G YFIDRDG  F  +LNFLR G  DLP      A+ + E
Sbjct: 76  MLAAMFSGRHYIP----TDSEGRYFIDRDGTHFGDVLNFLRSG--DLPPRERVRAVYK-E 128

Query: 61  ADFYQIRPLLDALRELEASQGTPAPTA--ALLHADVDVSPRLVHFSARRG-PHHYELSSV 117
           A +Y I PLL+ L  ++  +G     A   L+    D   R+V  +  R        + +
Sbjct: 129 AQYYAIGPLLEQLENMQPLKGEKVRQAFLGLMPYYKDHLERIVEIARLRAVQRKARFAKL 188

Query: 118 QVDTFRANLFCTDSEC--LGALRARFGVASGDRAEGSPHFHLEWAP 161
           +V  F+  +  T  EC  L +LR     + G   E      + + P
Sbjct: 189 KVCVFKEEMPITPYECPLLNSLRFERSESDGQLFEHHCEVDVSFGP 234


>gi|155369221 potassium channel tetramerisation domain containing 19
           [Homo sapiens]
          Length = 926

 Score = 51.6 bits (122), Expect = 6e-07
 Identities = 36/93 (38%), Positives = 45/93 (48%), Gaps = 9/93 (9%)

Query: 21  GGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDALRELEA-- 78
           G    I  DG+ FRHILNFLRLG+L LP  + E  L   E + Y I  L +AL + EA  
Sbjct: 433 GQTLLIHGDGQMFRHILNFLRLGKLFLPSEFKEWPLFCQEVEEYHIPSLSEALAQCEAYK 492

Query: 79  -------SQGTPAPTAALLHADVDVSPRLVHFS 104
                  S+   A +   LH   +    LV FS
Sbjct: 493 SWTQEKESENEEAFSIRRLHVVTEGPGSLVEFS 525



 Score = 37.4 bits (85), Expect = 0.011
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 26  IDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDALRELEASQGTPAP 85
           I+ +   FR I+NFLR  ++ LP  +    +L AE +  +I  L +A+R    + G  +P
Sbjct: 204 IECECSEFRFIVNFLRSQKILLPDNFSNIDVLEAEVEILEIPALTEAVRWYRMNMGGCSP 263

Query: 86  T 86
           T
Sbjct: 264 T 264



 Score = 35.8 bits (81), Expect = 0.032
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 16  LNSQGGGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDALRE 75
           L S      FIDRDG  FRH+  +L   +L       E  LL  +A   Q+ PLL  L  
Sbjct: 46  LTSSESQRLFIDRDGSTFRHVHYYLYTSKLSF-SSCAELNLLYEQALGLQLMPLLQTLDN 104

Query: 76  LE 77
           L+
Sbjct: 105 LK 106


>gi|40807368 potassium channel regulator isoform 2 [Homo sapiens]
          Length = 229

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 25/53 (47%), Positives = 34/53 (64%)

Query: 21 GGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDAL 73
          GG  F+DRDG  F  IL+FLR  +L LP  + +   L+ EA FY++R L+D L
Sbjct: 46 GGQIFVDRDGDLFSFILDFLRTHQLLLPTEFSDYLRLQREALFYELRSLVDLL 98


>gi|27734697 potassium channel regulator isoform 1 [Homo sapiens]
          Length = 272

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 25/53 (47%), Positives = 34/53 (64%)

Query: 21 GGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDAL 73
          GG  F+DRDG  F  IL+FLR  +L LP  + +   L+ EA FY++R L+D L
Sbjct: 46 GGQIFVDRDGDLFSFILDFLRTHQLLLPTEFSDYLRLQREALFYELRSLVDLL 98


>gi|55926200 potassium channel tetramerisation domain containing 16
           [Homo sapiens]
          Length = 428

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 28/80 (35%), Positives = 43/80 (53%)

Query: 1   MLGAMFRAGTPMPPNLNSQGGGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAE 60
           +L  MF        +L     G +FIDRDG  FR+IL++LR  ++ LP  + E   L+ E
Sbjct: 50  LLWKMFSPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKRE 109

Query: 61  ADFYQIRPLLDALRELEASQ 80
           A+++Q+  L+  L   E  Q
Sbjct: 110 AEYFQLPDLVKLLTPDEIKQ 129


>gi|19923973 potassium channel tetramerisation domain containing 12
           [Homo sapiens]
          Length = 325

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 27/89 (30%), Positives = 48/89 (53%)

Query: 13  PPNLNSQGGGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDA 72
           P  L     G +F+DRDG  FR+IL++LR  +L LP  + E + L+ EA+++++  L+  
Sbjct: 69  PQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRR 128

Query: 73  LRELEASQGTPAPTAALLHADVDVSPRLV 101
           L   +     P P+   +H +  +   L+
Sbjct: 129 LGAPQQPGPGPPPSRRGVHKEGSLGDELL 157


>gi|169234778 potassium channel tetramerisation domain containing 17
           [Homo sapiens]
          Length = 297

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%)

Query: 22  GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDALRE 75
           G Y IDRD   F  ILNFLR G+L L +   E  +L  EA+FY I PL+  +++
Sbjct: 74  GAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGVLE-EAEFYNIGPLIRIIKD 126


>gi|38198663 potassium channel tetramerisation domain containing 8
           [Homo sapiens]
          Length = 473

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 24/67 (35%), Positives = 36/67 (53%)

Query: 7   RAGTPMPPNLNSQGGGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQI 66
           R G      L       +FIDRDG  FR++L++LR  +L LP  + E   L  EA+++Q+
Sbjct: 80  RGGARRRGELPRDSRARFFIDRDGFLFRYVLDYLRDKQLALPEHFPEKERLLREAEYFQL 139

Query: 67  RPLLDAL 73
             L+  L
Sbjct: 140 TDLVKLL 146


>gi|46255026 potassium channel tetramerisation domain containing 3
           [Homo sapiens]
          Length = 815

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 33/61 (54%), Positives = 36/61 (59%), Gaps = 5/61 (8%)

Query: 22  GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDAL---RELEA 78
           G  FIDRD  AF  ILNFLR   LDL RG     +LR EA+FY I PL+  L    ELE 
Sbjct: 60  GAIFIDRDPAAFAPILNFLRTKELDL-RGV-SINVLRHEAEFYGITPLVRRLLLCEELER 117

Query: 79  S 79
           S
Sbjct: 118 S 118


>gi|223005950 SH3KBP1 binding protein 1 [Homo sapiens]
          Length = 707

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 27/53 (50%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 22  GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDALR 74
           G  FIDRD   F  ILNFLR   LD PRG   ++LL  EA FY + PL+  L+
Sbjct: 61  GAIFIDRDPTVFAPILNFLRTKELD-PRGVHGSSLLH-EAQFYGLTPLVRRLQ 111


>gi|27436981 potassium voltage-gated channel, Shal-related
           subfamily, member 1 [Homo sapiens]
          Length = 647

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 18/28 (64%), Positives = 19/28 (67%)

Query: 22  GHYFIDRDGKAFRHILNFLRLGRLDLPR 49
           G YF DRD   FRH+LNF R GRL  PR
Sbjct: 80  GEYFFDRDPDMFRHVLNFYRTGRLHCPR 107


>gi|30578412 potassium channel tetramerisation domain containing 13
           [Homo sapiens]
          Length = 329

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 1   MLGAMFRAGTPMPPNLNSQGGGHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAE 60
           ML AMF         + +  GG   IDR G+ F  ILN+LR G + LP    E   L  E
Sbjct: 65  MLKAMFSGRV----EVLTDAGGWVLIDRSGRHFGTILNYLRDGSVPLPESTRELGELLGE 120

Query: 61  ADFYQIRPLL-DALRELEASQGTPAP 85
           A +Y ++ L+ D    L+  + T +P
Sbjct: 121 ARYYLVQGLIEDCQLALQQKRETLSP 146


>gi|53829365 potassium channel tetramerisation domain containing 2
           [Homo sapiens]
          Length = 263

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 22  GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDALRE 75
           G Y IDRD   F  ILN+LR G+L + +   E  +L  EA+FY I  L+  ++E
Sbjct: 117 GAYLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLE-EAEFYNIASLVRLVKE 169


>gi|9506651 potassium channel tetramerisation domain containing 5
           [Homo sapiens]
          Length = 234

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 14  PNLNSQGG--GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLD 71
           P+L+S     G Y IDRD   F  +LN+LR G+L + +   E  +L  EA+FY I  L+ 
Sbjct: 78  PDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGVLE-EAEFYNITSLIK 136

Query: 72  ALRE 75
            +++
Sbjct: 137 LVKD 140


>gi|13994353 potassium channel tetramerisation domain containing 10
           [Homo sapiens]
          Length = 313

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 24/64 (37%), Positives = 34/64 (53%)

Query: 22  GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLDALRELEASQG 81
           G   IDR GK F  ILN+LR G + LP    E   L AEA +Y ++ L++  +    ++ 
Sbjct: 73  GWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGLVEECQAALQNKD 132

Query: 82  TPAP 85
           T  P
Sbjct: 133 TYEP 136


>gi|9789987 potassium voltage-gated channel, Shal-related subfamily,
           member 2 [Homo sapiens]
          Length = 630

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 17/26 (65%), Positives = 18/26 (69%)

Query: 24  YFIDRDGKAFRHILNFLRLGRLDLPR 49
           YF DRD   FRHILNF R G+L  PR
Sbjct: 83  YFFDRDPDIFRHILNFYRTGKLHYPR 108


>gi|142356950 potassium channel tetramerisation domain containing 14
           [Homo sapiens]
          Length = 255

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 10/58 (17%)

Query: 22  GHYFIDRDGKAFRHILNFLRLGRL---DLPRGYGETALLRAEADFYQIRPLLDALREL 76
           G +FIDR    FR IL++LR G++    +P  Y        EA FY+I+PL+  L ++
Sbjct: 75  GRFFIDRPSTYFRPILDYLRTGQVPTQHIPEVY-------REAQFYEIKPLVKLLEDM 125


>gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo
           sapiens]
          Length = 316

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 22/50 (44%), Positives = 29/50 (58%)

Query: 22  GHYFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRPLLD 71
           G   IDR GK F  ILN+LR   + LP+   E   L AEA +Y I+ L++
Sbjct: 69  GWILIDRCGKHFGTILNYLRDDTITLPQNRQEIKELMAEAKYYLIQGLVN 118


>gi|27436984 potassium voltage-gated channel, Shal-related
           subfamily, member 3 isoform 1 [Homo sapiens]
          Length = 655

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 24  YFIDRDGKAFRHILNFLRLGRLDLPRGYGETALLRAEADFYQIRP 68
           YF DRD + FR +LNF R G+L  PR Y   +    E  FY I P
Sbjct: 82  YFFDRDPEVFRCVLNFYRTGKLHYPR-YECISAYDDELAFYGILP 125


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.142    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,225,066
Number of Sequences: 37866
Number of extensions: 512490
Number of successful extensions: 981
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 925
Number of HSP's gapped (non-prelim): 63
length of query: 232
length of database: 18,247,518
effective HSP length: 99
effective length of query: 133
effective length of database: 14,498,784
effective search space: 1928338272
effective search space used: 1928338272
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.