Guide to the Human Genome
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Name: EPSTI1 Sequence: fasta or formatted (307aa) NCBI GI: 15147248
Description:

epithelial stromal interaction 1 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {410aa} epithelial stromal interaction 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         22           2
 C cysteine            1.0          3           1
 D aspartate           2.3          7           1
 E glutamate          11.4         35           2
 F phenylalanine       1.0          3           1
 G glycine             5.5         17           2
 H histidine           2.0          6           1
 I isoleucine          2.6          8           1
 K lysine              8.8         27           2
 L leucine             8.1         25           2
 M methionine          1.6          5           1
 N asparagine          5.5         17           2
 P proline             4.2         13           1
 Q glutamine          10.4         32           3
 R arginine           10.4         32           2
 S serine              8.5         26           2
 T threonine           2.9          9           1
 V valine              3.6         11           2
 W tryptophan          1.6          5           1
 Y tyrosine            1.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   epithelial stromal interaction 1 isoform 2 
EPSTI1                0.983   epithelial stromal interaction 1 isoform 1 
GIGYF2                0.066   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.066   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.066   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.066   GRB10 interacting GYF protein 2 isoform b 
TCHH                  0.063   trichohyalin 
MAP7D1                0.058   MAP7 domain containing 1 
KIAA1211              0.054   hypothetical protein LOC57482 
LOC727832             0.051   golgi autoantigen, golgin subfamily a-like 
MAP7                  0.051   microtubule-associated protein 7 
LOC283767             0.049   golgi autoantigen, golgin subfamily a-like 
INCENP                0.049   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.049   inner centromere protein antigens 135/155kDa isofor...
LOC440243             0.048   PREDICTED: Putative golgin subfamily A member 6-lik...
PCNT                  0.048   pericentrin 
SFRS17A               0.046   DNA segment on chromosome X and Y (unique) 155 expre...
LOC283685             0.044   PREDICTED: golgi autoantigen, golgin subfamily a-li...
ARGLU1                0.044   arginine and glutamate rich 1 
LOC645202             0.043   PREDICTED: hypothetical protein LOC645202 
GOLGA4                0.043   golgi autoantigen, golgin subfamily a, 4 
LOC100133599          0.041   PREDICTED: hypothetical protein 
LOC283685             0.041   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MLL2                  0.041   myeloid/lymphoid or mixed-lineage leukemia 2 
LOC100133599          0.041   PREDICTED: hypothetical protein 
LOC100133758          0.041   PREDICTED: hypothetical protein, partial 
MAP1B                 0.041   microtubule-associated protein 1B 
CENPE                 0.039   centromere protein E 
LOC647042             0.039   PREDICTED: hypothetical protein isoform 1 
TNIK                  0.039   TRAF2 and NCK interacting kinase isoform 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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