RAB11FIP1 31612

Name: RAB11FIP1	Sequence: fasta or formatted (649aa)		NCBI GI: 50363228
Description: RAB11 family interacting protein 1 isoform 1		Referenced in: Rab
Other entries for this name: alt prot [612aa] RAB11 family interacting protein 1 isoform 2 alt prot [1283aa] RAB11 family interacting protein 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 45 4 C cysteine 0.3 2 1 D aspartate 5.7 37 2 E glutamate 7.6 49 2 F phenylalanine 2.0 13 1 G glycine 6.5 42 3 H histidine 1.2 8 1 I isoleucine 2.8 18 2 K lysine 10.2 66 4 L leucine 9.6 62 2 M methionine 2.8 18 2 N asparagine 3.7 24 2 P proline 6.5 42 2 Q glutamine 3.5 23 1 R arginine 5.4 35 2 S serine 12.0 78 3 T threonine 5.4 35 2 V valine 6.0 39 2 W tryptophan 0.8 5 1 Y tyrosine 1.2 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RAB11 family interacting protein 1 isoform 1 RAB11FIP1 0.833 RAB11 family interacting protein 1 isoform 3 RAB11FIP5 0.230 RAB11 family interacting protein 5 (class I) RAB11FIP2 0.183 RAB11 family interacting protein 2 (class I) RAB11FIP1 0.158 RAB11 family interacting protein 1 isoform 2 MCTP1 0.023 multiple C2 domains, transmembrane 1 isoform S [Homo... MCTP1 0.023 multiple C2 domains, transmembrane 1 isoform L [Hom... UNC13A 0.019 unc-13 homolog A UNC13C 0.019 unc-13 homolog C UNC13B 0.019 UNC13 (C. elegans)-like SYT5 0.017 synaptotagmin V SYT1 0.016 synaptotagmin I SYT1 0.016 synaptotagmin I SYT1 0.016 synaptotagmin I RASAL1 0.016 RAS protein activator like 1 NOLC1 0.015 nucleolar and coiled-body phosphoprotein 1 ITSN2 0.015 intersectin 2 isoform 3 ITSN2 0.015 intersectin 2 isoform 1 SYT2 0.015 synaptotagmin II SYT2 0.015 synaptotagmin II CRKRS 0.015 Cdc2-related kinase, arginine/serine-rich isoform 2... CRKRS 0.015 Cdc2-related kinase, arginine/serine-rich isoform 1... TRDN 0.014 triadin MLL 0.014 myeloid/lymphoid or mixed-lineage leukemia protein [... ATRX 0.014 transcriptional regulator ATRX isoform 2 ATRX 0.014 transcriptional regulator ATRX isoform 1 ANKRD36 0.013 PREDICTED: ankyrin repeat domain 36 KIAA1853 0.013 KIAA1853 protein SRRM2 0.013 splicing coactivator subunit SRm300 DSPP 0.013 dentin sialophosphoprotein preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.