Guide to the Human Genome
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Name: UNC13B Sequence: fasta or formatted (1591aa) NCBI GI: 110611226
Description:

UNC13 (C. elegans)-like

Referenced in:

Synapses

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         97           3
 C cysteine            2.3         37           1
 D aspartate           6.7        106           3
 E glutamate           7.5        119           3
 F phenylalanine       3.8         61           2
 G glycine             4.7         75           2
 H histidine           2.5         40           1
 I isoleucine          4.0         63           2
 K lysine              6.7        106           2
 L leucine             9.2        146           3
 M methionine          2.4         38           1
 N asparagine          3.4         54           2
 P proline             4.8         76           3
 Q glutamine           5.6         89           2
 R arginine            5.2         83           2
 S serine              7.8        124           3
 T threonine           6.2         99           2
 V valine              6.8        108           2
 W tryptophan          1.6         25           1
 Y tyrosine            2.8         45           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UNC13 (C. elegans)-like 
UNC13A                0.760   unc-13 homolog A 
UNC13C                0.570   unc-13 homolog C 
UNC13D                0.032   unc-13 homolog D 
BAIAP3                0.026   BAI1-associated protein 3 
PRKCG                 0.017   protein kinase C, gamma 
PRKCB                 0.016   protein kinase C, beta isoform 1 
PRKCB                 0.016   protein kinase C, beta isoform 2 
PRKCA                 0.016   protein kinase C, alpha 
RASGRP1               0.016   RAS guanyl releasing protein 1 isoform b 
RASGRP1               0.016   RAS guanyl releasing protein 1 isoform a 
RASGRP3               0.015   RAS guanyl releasing protein 3 (calcium and DAG-reg...
RASGRP3               0.015   RAS guanyl releasing protein 3 (calcium and DAG-regu...
RASGRP3               0.015   RAS guanyl releasing protein 3 (calcium and DAG-regul...
RASGRP4               0.014   RAS guanyl releasing protein 4 isoform a 
RASGRP4               0.014   RAS guanyl releasing protein 4 isoform g 
RASGRP4               0.014   RAS guanyl releasing protein 4 isoform f 
RASGRP4               0.014   RAS guanyl releasing protein 4 isoform e 
RASGRP4               0.014   RAS guanyl releasing protein 4 isoform d 
RASGRP4               0.014   RAS guanyl releasing protein 4 isoform c 
RASGRP4               0.014   RAS guanyl releasing protein 4 isoform b 
MCTP1                 0.014   multiple C2 domains, transmembrane 1 isoform S [Homo...
MCTP1                 0.014   multiple C2 domains, transmembrane 1 isoform L [Hom...
RASGRP2               0.012   RAS guanyl releasing protein 2 
RASGRP2               0.012   RAS guanyl releasing protein 2 
RASGRP2               0.012   RAS guanyl releasing protein 2 
PRKCQ                 0.012   protein kinase C, theta 
MCTP2                 0.012   multiple C2 domains, transmembrane 2 isoform 2 [Hom...
MCTP2                 0.012   multiple C2 domains, transmembrane 2 isoform 1 [Hom...
MCTP2                 0.012   multiple C2 domains, transmembrane 2 isoform 3 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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