Guide to the Human Genome
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Name: RASAL1 Sequence: fasta or formatted (804aa) NCBI GI: 4759026
Description:

RAS protein activator like 1

Referenced in:

Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         67           2
 C cysteine            2.0         16           2
 D aspartate           6.5         52           2
 E glutamate           6.8         55           2
 F phenylalanine       4.0         32           2
 G glycine             6.6         53           2
 H histidine           2.4         19           1
 I isoleucine          2.5         20           2
 K lysine              4.4         35           2
 L leucine            13.2        106           4
 M methionine          2.4         19           1
 N asparagine          1.6         13           1
 P proline             6.1         49           2
 Q glutamine           4.6         37           3
 R arginine            7.7         62           2
 S serine              6.5         52           3
 T threonine           4.4         35           2
 V valine              6.8         55           2
 W tryptophan          1.7         14           1
 Y tyrosine            1.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAS protein activator like 1 
RASA4                 0.441   RAS p21 protein activator 4 isoform 1 
LOC100132214          0.406   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.406   PREDICTED: similar to calcium-promoted Ras inactiva...
RASA4                 0.405   RAS p21 protein activator 4 isoform 2 
LOC100132214          0.373   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.373   PREDICTED: similar to calcium-promoted Ras inactiva...
RASA3                 0.211   RAS p21 protein activator 3 
RASA2                 0.175   RAS p21 protein activator 2 
RASA1                 0.070   RAS p21 protein activator 1 isoform 1 
RASA1                 0.070   RAS p21 protein activator 1 isoform 2 
RASAL2                0.053   RAS protein activator like 2 isoform 2 
RASAL2                0.053   RAS protein activator like 2 isoform 1 
RASAL3                0.052   RAS protein activator like 3 
SYNGAP1               0.052   synaptic Ras GTPase activating protein 1 
DAB2IP                0.051   disabled homolog 2 interacting protein isoform 2 [Ho...
DAB2IP                0.051   disabled homolog 2 interacting protein isoform 1 [Ho...
NF1                   0.038   neurofibromin isoform 2 
SYT9                  0.034   synaptotagmin IX 
NF1                   0.031   neurofibromin isoform 1 
SYT2                  0.031   synaptotagmin II 
SYT2                  0.031   synaptotagmin II 
SYT5                  0.031   synaptotagmin V 
SYT3                  0.031   synaptotagmin III 
SYT3                  0.031   synaptotagmin III 
SYT3                  0.031   synaptotagmin III 
PRKCA                 0.030   protein kinase C, alpha 
SYT6                  0.030   synaptotagmin VI 
SYT7                  0.029   synaptotagmin VII 
SYT1                  0.029   synaptotagmin I 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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