Guide to the Human Genome
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Name: MCTP1 Sequence: fasta or formatted (778aa) NCBI GI: 50582996
Description:

multiple C2 domains, transmembrane 1 isoform S

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [999aa] multiple C2 domains, transmembrane 1 isoform L
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         34           2
 C cysteine            1.8         14           1
 D aspartate           7.1         55           2
 E glutamate           6.3         49           4
 F phenylalanine       4.6         36           1
 G glycine             4.6         36           2
 H histidine           1.8         14           1
 I isoleucine          6.0         47           2
 K lysine              7.7         60           2
 L leucine            12.5         97           5
 M methionine          1.5         12           1
 N asparagine          5.0         39           2
 P proline             4.1         32           2
 Q glutamine           3.5         27           1
 R arginine            5.5         43           2
 S serine              6.4         50           2
 T threonine           4.2         33           1
 V valine              7.8         61           2
 W tryptophan          1.7         13           1
 Y tyrosine            3.3         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   multiple C2 domains, transmembrane 1 isoform S [Homo... 
MCTP1                 0.974   multiple C2 domains, transmembrane 1 isoform L [Hom...
MCTP2                 0.460   multiple C2 domains, transmembrane 2 isoform 1 [Hom...
MCTP2                 0.308   multiple C2 domains, transmembrane 2 isoform 2 [Hom...
MCTP2                 0.190   multiple C2 domains, transmembrane 2 isoform 3 [Hom...
DOC2B                 0.045   double C2-like domains, beta 
RPH3A                 0.044   rabphilin 3A homolog isoform 1 
RPH3A                 0.044   rabphilin 3A homolog isoform 2 
DOC2A                 0.043   double C2-like domains, alpha 
ESYT1                 0.042   extended synaptotagmin-like protein 1 
SYT1                  0.038   synaptotagmin I 
SYT1                  0.038   synaptotagmin I 
SYT1                  0.038   synaptotagmin I 
SYT2                  0.036   synaptotagmin II 
SYT2                  0.036   synaptotagmin II 
ESYT2                 0.035   family with sequence similarity 62 (C2 domain contai...
SYT5                  0.033   synaptotagmin V 
PRKCA                 0.030   protein kinase C, alpha 
PRKCB                 0.030   protein kinase C, beta isoform 1 
PRKCB                 0.030   protein kinase C, beta isoform 2 
LOC100132214          0.030   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.030   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.030   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.030   PREDICTED: similar to calcium-promoted Ras inactiva...
RASA4                 0.030   RAS p21 protein activator 4 isoform 2 
RASA4                 0.030   RAS p21 protein activator 4 isoform 1 
ITSN2                 0.030   intersectin 2 isoform 3 
ITSN2                 0.030   intersectin 2 isoform 1 
SYT7                  0.030   synaptotagmin VII 
ESYT3                 0.030   family with sequence similarity 62 (C2 domain conta...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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