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Search of human proteins with 5032007
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5032007 purine-rich element binding protein A [Homo sapiens]
(322 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5032007 purine-rich element binding protein A [Homo sapiens] 649 0.0
gi|15147219 purine-rich element binding protein B [Homo sapiens] 385 e-107
gi|7019507 purine-rich element binding protein G isoform A [Homo... 301 5e-82
gi|62865862 purine-rich element binding protein G isoform B [Hom... 243 2e-64
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 65 6e-11
gi|109452587 family with sequence similarity 98, member B isofor... 64 2e-10
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 63 4e-10
gi|4502565 calpain, small subunit 1 [Homo sapiens] 59 6e-09
gi|51599151 calpain, small subunit 1 [Homo sapiens] 59 6e-09
gi|55956899 keratin 9 [Homo sapiens] 59 8e-09
gi|238859557 regulatory factor X1 [Homo sapiens] 58 1e-08
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 57 2e-08
gi|84570137 homeobox B3 [Homo sapiens] 57 2e-08
gi|33620755 YEATS domain containing 2 [Homo sapiens] 57 3e-08
gi|195972866 keratin 10 [Homo sapiens] 56 4e-08
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 56 5e-08
gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 56 5e-08
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 56 5e-08
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 56 5e-08
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 56 5e-08
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 55 6e-08
gi|13994190 frizzled 8 [Homo sapiens] 55 8e-08
gi|154091020 leucine-rich repeats and calponin homology (CH) dom... 55 8e-08
gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo ... 55 1e-07
gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens] 55 1e-07
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 55 1e-07
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 55 1e-07
gi|109255251 loricrin [Homo sapiens] 55 1e-07
gi|12056465 fibrillarin [Homo sapiens] 54 1e-07
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens] 53 3e-07
>gi|5032007 purine-rich element binding protein A [Homo sapiens]
Length = 322
Score = 649 bits (1675), Expect = 0.0
Identities = 322/322 (100%), Positives = 322/322 (100%)
Query: 1 MADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQE 60
MADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQE
Sbjct: 1 MADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQE 60
Query: 61 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEH 120
LASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEH
Sbjct: 61 LASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEH 120
Query: 121 YAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGL 180
YAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGL
Sbjct: 121 YAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGL 180
Query: 181 GSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKY 240
GSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKY
Sbjct: 181 GSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKY 240
Query: 241 GVFMRVSEVKPTYRNSITVPYKVWAKFGHTFCKYSEEMKKIQEKQREKRAACEQLHQQQQ 300
GVFMRVSEVKPTYRNSITVPYKVWAKFGHTFCKYSEEMKKIQEKQREKRAACEQLHQQQQ
Sbjct: 241 GVFMRVSEVKPTYRNSITVPYKVWAKFGHTFCKYSEEMKKIQEKQREKRAACEQLHQQQQ 300
Query: 301 QQQEETAAATLLLQGEEEGEED 322
QQQEETAAATLLLQGEEEGEED
Sbjct: 301 QQQEETAAATLLLQGEEEGEED 322
>gi|15147219 purine-rich element binding protein B [Homo sapiens]
Length = 312
Score = 385 bits (990), Expect = e-107
Identities = 204/286 (71%), Positives = 225/286 (78%), Gaps = 28/286 (9%)
Query: 31 GGGGGGGGGGGGSGGGGGGAPGGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAE 90
G G GGGGG G + GG + ETQELASKR+DIQNKRFYLDVKQNAKGRFLKIAE
Sbjct: 4 GDSGSERGGGGGPCGFQPASRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAE 63
Query: 91 VGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDE---PRRALKSEF 147
VGAGG+KSRLTLSM+VA EFRD LGDFIEHYAQLGPS P LA +E PRRALKSEF
Sbjct: 64 VGAGGSKSRLTLSMAVAAEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEF 123
Query: 148 LVRENRKYYMDLKENQRGRFLRIRQTVNR-------GPGLGSTQ-GQTIALPAQGLIEFR 199
LVRENRKYY+DLKENQRGRFLRIRQTVNR GPG G Q GQTIALPAQGLIEFR
Sbjct: 124 LVRENRKYYLDLKENQRGRFLRIRQTVNRGGGGFGAGPGPGGLQSGQTIALPAQGLIEFR 183
Query: 200 DALAKLIDDYGVEEEP-----------------AELPEGTSLTVDNKRFFFDVGSNKYGV 242
DALAKLIDDYG E++ ELPEGTS+TVD+KRFFFDVG NKYGV
Sbjct: 184 DALAKLIDDYGGEDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNKYGV 243
Query: 243 FMRVSEVKPTYRNSITVPYKVWAKFGHTFCKYSEEMKKIQEKQREK 288
F+RVSEVKP+YRN+ITVP+K W KFG FC+Y++EMK+IQE+QR+K
Sbjct: 244 FLRVSEVKPSYRNAITVPFKAWGKFGGAFCRYADEMKEIQERQRDK 289
>gi|7019507 purine-rich element binding protein G isoform A [Homo
sapiens]
Length = 347
Score = 301 bits (771), Expect = 5e-82
Identities = 172/338 (50%), Positives = 211/338 (62%), Gaps = 69/338 (20%)
Query: 32 GGGGGGGGGGGSGGGGGGAPGGL----QH-------------------ETQELASKRVDI 68
GGGGG G GG + GG G + L QH E QELASKRVDI
Sbjct: 8 GGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQELASKRVDI 67
Query: 69 QNKRFYLDVKQNAKGRFLKIAEVGAGGN------KSRLTLSMSVAVEFRDYLGDFIEHYA 122
Q KRFYLDVKQ+++GRFLKIAEV G KS+LTLS+SVA E +D LGDFIEHYA
Sbjct: 68 QKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLGDFIEHYA 127
Query: 123 QLG------------------------PSQPPDLAQAQDEPRRALKSEFLVRENRKYYMD 158
LG PS PP +++ P LK++++ R+NRKYY+D
Sbjct: 128 HLGLKGHRQEHGHSKEQGSRRRQKHSAPS-PPVSVGSEEHPHSVLKTDYIERDNRKYYLD 186
Query: 159 LKENQRGRFLRIRQTVNRGPGL------GSTQGQTIALPAQGLIEFRDALAKLIDDYGV- 211
LKENQRGRFLRIRQT+ RG G+ Q QTI LPAQG+IEFRDAL +LI+DYG
Sbjct: 187 LKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLIEDYGEG 246
Query: 212 --------EEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKV 263
+++P ELPEGTS VDNKRF+FDVGSNKYG+F++VSEV+P YRN+ITVP+K
Sbjct: 247 DIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKVSEVRPPYRNTITVPFKA 306
Query: 264 WAKFGHTFCKYSEEMKKIQEKQREKRAACEQLHQQQQQ 301
W +FG F KY EEM+KI +EKR + ++Q+
Sbjct: 307 WTRFGENFIKYEEEMRKICNSHKEKRMDGRKASGEEQE 344
>gi|62865862 purine-rich element binding protein G isoform B [Homo
sapiens]
Length = 322
Score = 243 bits (619), Expect = 2e-64
Identities = 145/292 (49%), Positives = 177/292 (60%), Gaps = 69/292 (23%)
Query: 32 GGGGGGGGGGGSGGGGGGAPGGL----QH-------------------ETQELASKRVDI 68
GGGGG G GG + GG G + L QH E QELASKRVDI
Sbjct: 8 GGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQELASKRVDI 67
Query: 69 QNKRFYLDVKQNAKGRFLKIAEVGAGGN------KSRLTLSMSVAVEFRDYLGDFIEHYA 122
Q KRFYLDVKQ+++GRFLKIAEV G KS+LTLS+SVA E +D LGDFIEHYA
Sbjct: 68 QKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLGDFIEHYA 127
Query: 123 QLG------------------------PSQPPDLAQAQDEPRRALKSEFLVRENRKYYMD 158
LG PS PP +++ P LK++++ R+NRKYY+D
Sbjct: 128 HLGLKGHRQEHGHSKEQGSRRRQKHSAPS-PPVSVGSEEHPHSVLKTDYIERDNRKYYLD 186
Query: 159 LKENQRGRFLRIRQTVNRGPGL------GSTQGQTIALPAQGLIEFRDALAKLIDDYGV- 211
LKENQRGRFLRIRQT+ RG G+ Q QTI LPAQG+IEFRDAL +LI+DYG
Sbjct: 187 LKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLIEDYGEG 246
Query: 212 --------EEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRN 255
+++P ELPEGTS VDNKRF+FDVGSNKYG+F++++ + N
Sbjct: 247 DIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKLTNYPKSREN 298
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 65.5 bits (158), Expect = 6e-11
Identities = 32/54 (59%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGG-----GGGGGGGSGGGGGGAPGGL 54
+G+ GAA G GG+ PG G G GGGGG GGGGGGG GGGGGG GGL
Sbjct: 129 AGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGGGL 182
Score = 45.4 bits (106), Expect = 7e-05
Identities = 26/56 (46%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELA 62
G GG G GG G PG G G GG GGGGGG GG GG P H L+
Sbjct: 146 GPGGGGGPGGGGGPGGGPGGGGG-GGPGGGGGGPGGGLLGGSAHPHPHMHSLGHLS 200
Score = 44.7 bits (104), Expect = 1e-04
Identities = 20/41 (48%), Positives = 22/41 (53%)
Query: 13 AALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
A + G G G G+ G GGGGG GG GG GGG GG
Sbjct: 126 ALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGG 166
Score = 37.0 bits (84), Expect = 0.024
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 17 SGGSLGHPGSGSGSGGGGGGGGGG----GGSGGGGGGAPGG 53
S SL G+G GGGG GG G GGGG PGG
Sbjct: 121 SSPSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGG 161
Score = 33.1 bits (74), Expect = 0.34
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Query: 14 ALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGG------GGGGAPGG 53
AL G L H S S + G GG G GG GGGG PGG
Sbjct: 110 ALEPGDLLDHISSPSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGG 155
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 63.9 bits (154), Expect = 2e-10
Identities = 30/49 (61%), Positives = 30/49 (61%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQ 55
G GG G GG G G G G GG GGGGGGGGG GGGGGG GG Q
Sbjct: 340 GGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQ 388
Score = 57.8 bits (138), Expect = 1e-08
Identities = 27/47 (57%), Positives = 27/47 (57%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G G G GG G G G G GG GGGGGG GG GGGGGG GG
Sbjct: 333 GGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGG 379
Score = 56.2 bits (134), Expect = 4e-08
Identities = 27/45 (60%), Positives = 27/45 (60%)
Query: 9 EQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
E GG G GG G G G G GGGG GG GGGG G GGGG GG
Sbjct: 330 EGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGG 374
Score = 54.3 bits (129), Expect = 1e-07
Identities = 28/51 (54%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 4 RDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGG-GSGGGGGGAPGG 53
++ G +GG G GG G G G G G GG GGGGGG G GGGGGG GG
Sbjct: 329 QEGGGGRGGWGGGGGGG-GRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGG 378
Score = 47.8 bits (112), Expect = 1e-05
Identities = 25/47 (53%), Positives = 25/47 (53%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G GG G GG G G G G GGG GGGGGGG G G G GG
Sbjct: 349 GGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGG 395
Score = 47.8 bits (112), Expect = 1e-05
Identities = 22/36 (61%), Positives = 23/36 (63%)
Query: 12 GAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGG 47
G G GG G+ G G G GGGGGGGGGG GGGG
Sbjct: 394 GGRGGYGGRGGYGGRGYGDPYGGGGGGGGGGGGGGG 429
Score = 45.8 bits (107), Expect = 5e-05
Identities = 29/81 (35%), Positives = 29/81 (35%), Gaps = 31/81 (38%)
Query: 4 RDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGG----------------------- 40
R G GG GG G G G G GG GGGGGGG
Sbjct: 347 RGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYG 406
Query: 41 --------GGSGGGGGGAPGG 53
GG GGGGGG GG
Sbjct: 407 GRGYGDPYGGGGGGGGGGGGG 427
Score = 45.8 bits (107), Expect = 5e-05
Identities = 29/77 (37%), Positives = 30/77 (38%), Gaps = 30/77 (38%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGG-------------------------- 40
G +GG G GG G G G G GGGGGGG GG
Sbjct: 353 GGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGD 412
Query: 41 ----GGSGGGGGGAPGG 53
GG GGGGGG GG
Sbjct: 413 PYGGGGGGGGGGGGGGG 429
Score = 41.2 bits (95), Expect = 0.001
Identities = 19/38 (50%), Positives = 20/38 (52%)
Query: 5 DSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGG 42
D G G G G G+ G GGGGGGGGGGGG
Sbjct: 392 DYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGGGGGGG 429
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 62.8 bits (151), Expect = 4e-10
Identities = 30/43 (69%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 12 GAALGSGGSLGHPGSGSGSGGGGGG-GGGGGGSGGGGGGAPGG 53
G GSGG+ G G GSGSGGGGGG GGGGGGS GGG G GG
Sbjct: 477 GGGSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGG 519
Score = 62.4 bits (150), Expect = 5e-10
Identities = 32/49 (65%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Query: 4 RDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
R GS GGA GSGG GSGSG GGGG GGGGGG SGGG G A G
Sbjct: 476 RGGGSGSGGAGGGSGG-----GSGSGGGGGGAGGGGGGSSGGGSGTAGG 519
Score = 61.6 bits (148), Expect = 9e-10
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 13 AALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
+A+ GG G G+G GSGGG G GGGGGG+GGGGGG+ GG
Sbjct: 472 SAVHRGGGSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGG 512
Score = 60.5 bits (145), Expect = 2e-09
Identities = 28/41 (68%), Positives = 29/41 (70%)
Query: 13 AALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
AA + S H G GSGSGG GGG GGG GSGGGGGGA GG
Sbjct: 465 AAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGAGGG 505
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/46 (43%), Positives = 22/46 (47%)
Query: 8 SEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
S AA + + S GGG G GG GGGSGGG G GG
Sbjct: 454 SPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGG 499
Score = 35.0 bits (79), Expect = 0.090
Identities = 17/50 (34%), Positives = 22/50 (44%)
Query: 4 RDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
+ S + AA + + + S GGG G GG G G GGG GG
Sbjct: 448 QSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGG 497
Score = 34.3 bits (77), Expect = 0.15
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 2 ADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
A+ S S AA + + + + GGG G GG GG GGG+ G
Sbjct: 445 AEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSG 496
>gi|4502565 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 58.9 bits (141), Expect = 6e-09
Identities = 28/46 (60%), Positives = 29/46 (63%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
G GG G GG LG+ G SG GGGGGGGGGG GGGGGG G
Sbjct: 11 GGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGG 56
Score = 58.5 bits (140), Expect = 8e-09
Identities = 32/61 (52%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAP---GGLQHETQELAS 63
G GG G G LG SG+G GGGGGGGGGGGG GGGGG A GG+ E A+
Sbjct: 15 GGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRILGGVISAISEAAA 74
Query: 64 K 64
+
Sbjct: 75 Q 75
Score = 53.1 bits (126), Expect = 3e-07
Identities = 28/46 (60%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 11 GGAALGSGGSLGHPGSGSGSGG---GGGGGGGGGGSGGGGGGAPGG 53
GG G GG LG G G+ GG G GGGGGGGG GGGGGG GG
Sbjct: 11 GGGGGGGGGGLGG-GLGNVLGGLISGAGGGGGGGGGGGGGGGGGGG 55
Score = 43.1 bits (100), Expect = 3e-04
Identities = 21/37 (56%), Positives = 22/37 (59%), Gaps = 10/37 (27%)
Query: 27 GSGSGGGGGGGGGGG----------GSGGGGGGAPGG 53
G G GGGGGGG GGG G+GGGGGG GG
Sbjct: 10 GGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGG 46
Score = 42.0 bits (97), Expect = 7e-04
Identities = 18/23 (78%), Positives = 18/23 (78%)
Query: 32 GGGGGGGGGGGSGGGGGGAPGGL 54
GGGGGGGGGGG GGG G GGL
Sbjct: 10 GGGGGGGGGGGLGGGLGNVLGGL 32
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/38 (52%), Positives = 20/38 (52%), Gaps = 9/38 (23%)
Query: 25 GSGSGSGGGGGGGGG---------GGGSGGGGGGAPGG 53
G G G GGGGG GGG G GGGGGG GG
Sbjct: 10 GGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGG 47
Score = 31.2 bits (69), Expect = 1.3
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 14/38 (36%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGS 43
SG+ GG G GGGGGGGGGGGG+
Sbjct: 34 SGAGGGGGGGG--------------GGGGGGGGGGGGT 57
>gi|51599151 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 58.9 bits (141), Expect = 6e-09
Identities = 28/46 (60%), Positives = 29/46 (63%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
G GG G GG LG+ G SG GGGGGGGGGG GGGGGG G
Sbjct: 11 GGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGG 56
Score = 58.5 bits (140), Expect = 8e-09
Identities = 32/61 (52%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAP---GGLQHETQELAS 63
G GG G G LG SG+G GGGGGGGGGGGG GGGGG A GG+ E A+
Sbjct: 15 GGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRILGGVISAISEAAA 74
Query: 64 K 64
+
Sbjct: 75 Q 75
Score = 53.1 bits (126), Expect = 3e-07
Identities = 28/46 (60%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 11 GGAALGSGGSLGHPGSGSGSGG---GGGGGGGGGGSGGGGGGAPGG 53
GG G GG LG G G+ GG G GGGGGGGG GGGGGG GG
Sbjct: 11 GGGGGGGGGGLGG-GLGNVLGGLISGAGGGGGGGGGGGGGGGGGGG 55
Score = 43.1 bits (100), Expect = 3e-04
Identities = 21/37 (56%), Positives = 22/37 (59%), Gaps = 10/37 (27%)
Query: 27 GSGSGGGGGGGGGGG----------GSGGGGGGAPGG 53
G G GGGGGGG GGG G+GGGGGG GG
Sbjct: 10 GGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGG 46
Score = 42.0 bits (97), Expect = 7e-04
Identities = 18/23 (78%), Positives = 18/23 (78%)
Query: 32 GGGGGGGGGGGSGGGGGGAPGGL 54
GGGGGGGGGGG GGG G GGL
Sbjct: 10 GGGGGGGGGGGLGGGLGNVLGGL 32
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/38 (52%), Positives = 20/38 (52%), Gaps = 9/38 (23%)
Query: 25 GSGSGSGGGGGGGGG---------GGGSGGGGGGAPGG 53
G G G GGGGG GGG G GGGGGG GG
Sbjct: 10 GGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGG 47
Score = 31.2 bits (69), Expect = 1.3
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 14/38 (36%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGS 43
SG+ GG G GGGGGGGGGGGG+
Sbjct: 34 SGAGGGGGGGG--------------GGGGGGGGGGGGT 57
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 58.5 bits (140), Expect = 8e-09
Identities = 31/49 (63%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 7 GSEQGGAALG-SGGSLGHPGSGSGSGGGGGGG-GGGGGSGGGGGGAPGG 53
G GG+ G SGGS G+ G GSGSGGG GGG GGG GS GG GG+ GG
Sbjct: 540 GGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGG 588
Score = 58.2 bits (139), Expect = 1e-08
Identities = 28/48 (58%), Positives = 30/48 (62%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
SG GG + GGS G G GSGSGGG GGG GGG GG GG+ GG
Sbjct: 502 SGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGG 549
Score = 57.0 bits (136), Expect = 2e-08
Identities = 29/43 (67%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 12 GAALGSGGSLGH-PGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G+ GSGGS G GSG GSGGG GGG GGG SGG GGG GG
Sbjct: 511 GSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGG 553
Score = 56.6 bits (135), Expect = 3e-08
Identities = 28/47 (59%), Positives = 30/47 (63%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
GS G+ GSGGS G GSG G GGG G GG GGS GGG G+ GG
Sbjct: 483 GSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGG 529
Score = 55.1 bits (131), Expect = 8e-08
Identities = 28/48 (58%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
SG GG + GSGG+ G GSGSG G GGG GGG G GG GG GG
Sbjct: 543 SGGSGGGHSGGSGGNYGG-GSGSGGGSGGGYGGGSGSRGGSGGSHGGG 589
Score = 54.7 bits (130), Expect = 1e-07
Identities = 30/49 (61%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 7 GSEQG-GAALGSGGSLGHPGSGSGSGGGGGGG-GGGGGSGGGGGGAPGG 53
GS G G + G GGS G G GSGS GG GG GGG GSGGG GG GG
Sbjct: 488 GSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGG 536
Score = 52.8 bits (125), Expect = 4e-07
Identities = 28/50 (56%), Positives = 28/50 (56%)
Query: 4 RDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
R G GG SGG G G GSG G GGG G G GG GG GGGA GG
Sbjct: 95 RGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGG 144
Score = 52.0 bits (123), Expect = 7e-07
Identities = 29/49 (59%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 7 GSEQGGAALGSGGSLGHPGS-GSGSGGGGGGGGG-GGGSGGGGGGAPGG 53
G GG GSG G GS G GSG GGG GGG GGGSGGG G GG
Sbjct: 500 GGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGG 548
Score = 52.0 bits (123), Expect = 7e-07
Identities = 28/49 (57%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSG--SGGGGGGGGGGGGSGGGGGGAPGG 53
G GG GSGG GH G G SGG GG GGG GSGGG GG GG
Sbjct: 528 GGSGGGYGGGSGG--GHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGG 574
Score = 51.2 bits (121), Expect = 1e-06
Identities = 24/47 (51%), Positives = 24/47 (51%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G GG G GS G G G G G GGG GGG GG GGG GG
Sbjct: 499 GGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGG 545
Score = 51.2 bits (121), Expect = 1e-06
Identities = 27/48 (56%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 7 GSEQGGAALGSGGSLGHPG-SGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G GG + GSGG GH G SG GGG G GGG GG GGG G+ GG
Sbjct: 536 GGSGGGHSGGSGG--GHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGG 581
Score = 51.2 bits (121), Expect = 1e-06
Identities = 27/49 (55%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGS-GGGGGGGGGGGGSGGGGGGAPGG 53
SG GG + GGS G G GSGS GG GG GGG G GG GG+ GG
Sbjct: 554 SGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGG 602
Score = 50.8 bits (120), Expect = 2e-06
Identities = 28/52 (53%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSG--GGGGGG--GGGGGSGGGGGGAPGG 53
SG GG + GGS G G GSG G GG GGG GG GG+ GGG G+ GG
Sbjct: 516 SGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGG 567
Score = 50.1 bits (118), Expect = 3e-06
Identities = 28/55 (50%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGG----GSGGGGGGAPGGLQH 56
SG GG + GGS G G GSG GG GG GGG GSGGG GG G H
Sbjct: 568 SGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGKSSH 622
Score = 49.7 bits (117), Expect = 4e-06
Identities = 27/51 (52%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGG---GGGGGGSGGGGGGAPGG 53
SGS G GGS GSG G GGG GG GG GGG GG GG GG
Sbjct: 510 SGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGG 560
Score = 48.9 bits (115), Expect = 6e-06
Identities = 25/47 (53%), Positives = 27/47 (57%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G GG + G GG+ G S SG GGG GGG GGG GGG G GG
Sbjct: 87 GGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGG 133
Score = 47.8 bits (112), Expect = 1e-05
Identities = 25/47 (53%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 12 GAALGSGGSLGHPGSGS-----GSGGGGGGGGGGGGSGGGGGGAPGG 53
G GSGGS G G G GG GGG GGG GS GG GG+ GG
Sbjct: 476 GGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGG 522
Score = 47.0 bits (110), Expect = 2e-05
Identities = 31/75 (41%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELASKR 65
SG GG GSGG G G GSG GG GG GGG GG GG + QEL S+
Sbjct: 108 SGGFGGGFGGGSGGGFG---GGYGSGFGGFGGFGGGAGGGDGGILTANEKSTMQELNSRL 164
Query: 66 VDIQNKRFYLDVKQN 80
+K L+ N
Sbjct: 165 ASYLDKVQALEEANN 179
Score = 45.1 bits (105), Expect = 9e-05
Identities = 26/52 (50%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGG-----GGGGGGGGGSGGGGGGAPG 52
SG ++LG G G G G SGGG G GGG GGGSGGG GG G
Sbjct: 77 SGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYG 128
Score = 45.1 bits (105), Expect = 9e-05
Identities = 22/47 (46%), Positives = 23/47 (48%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G G + G G G GS G G GGG GGG G GG GG GG
Sbjct: 477 GRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGG 523
Score = 44.7 bits (104), Expect = 1e-04
Identities = 22/40 (55%), Positives = 24/40 (60%)
Query: 11 GGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGA 50
GG LGSGGS+ S S GGGGGGG S G GGG+
Sbjct: 18 GGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGS 57
Score = 42.4 bits (98), Expect = 6e-04
Identities = 23/43 (53%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 11 GGAALGSGGSLGHPGSGSGSGGGGGG-GGGGGGSGGGGGGAPG 52
GG+ G GG G G GS GGG G GG GGS GGG A G
Sbjct: 566 GGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASG 608
Score = 41.6 bits (96), Expect = 0.001
Identities = 22/43 (51%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 11 GGAALGSGGSLGHPGSGSGSGGGGGGGG-GGGGSGGGGGGAPG 52
G +G GG G GS GG GG GGGGSGGG GG G
Sbjct: 469 GAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSG 511
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/47 (44%), Positives = 23/47 (48%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
GS G +A GG G G G GGG GG GG GGG+ GG
Sbjct: 76 GSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGG 122
Score = 40.8 bits (94), Expect = 0.002
Identities = 26/55 (47%), Positives = 26/55 (47%), Gaps = 11/55 (20%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGG----GGGGGGG----GGSGGGGGGAPGG 53
G GG GSGG G G GGG GG GGG GG GGG GG GG
Sbjct: 70 GYSYGG---GSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGG 121
Score = 39.7 bits (91), Expect = 0.004
Identities = 24/47 (51%), Positives = 27/47 (57%), Gaps = 9/47 (19%)
Query: 16 GSGGSLGHP-GSGSGSG------GGGGGGG--GGGGSGGGGGGAPGG 53
G GGS G+ G GSG G GGG GGG G GG+ GGG + GG
Sbjct: 64 GGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGG 110
Score = 39.3 bits (90), Expect = 0.005
Identities = 30/62 (48%), Positives = 31/62 (50%), Gaps = 20/62 (32%)
Query: 8 SEQGGAALGSGGSLGHPGS-------GSGSGGGGGGG------GGGGGS----GGGGGGA 50
S GG G GG LG GS S SGGGGGGG G GGGS G GGGG+
Sbjct: 12 SRSGG---GGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGS 68
Query: 51 PG 52
G
Sbjct: 69 FG 70
Score = 39.3 bits (90), Expect = 0.005
Identities = 22/45 (48%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 9 EQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
E GA G G G GSG G G GG GG GGG GG GG
Sbjct: 466 ESSGA--GKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGG 508
Score = 38.9 bits (89), Expect = 0.006
Identities = 23/54 (42%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGG-------GGGAPGG 53
G G + G G G S G G GGG G GG SGGG GGG GG
Sbjct: 65 GGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGG 118
Score = 36.2 bits (82), Expect = 0.040
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 18 GGSLGHPGSGSGSGGGGGGGGGGG----GSGGGGGGAPGG 53
GG SG+G G GG GG GG GS GG GG+ GG
Sbjct: 460 GGQEDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGG 499
Score = 35.4 bits (80), Expect = 0.069
Identities = 24/56 (42%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
Query: 8 SEQGGAALGSGGSLGHPGSGS---GSGGGGGG-------GGGGGGSGGGGGGAPGG 53
S G GS G G GS GGG GG GGG GG G GGA GG
Sbjct: 48 SSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGG 103
Score = 30.4 bits (67), Expect = 2.2
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 11/39 (28%)
Query: 26 SGSGSGGGGGGGGGGGGSGG-----------GGGGAPGG 53
S S GGGGGGG GSGG GGG GG
Sbjct: 7 SSSYLSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGG 45
Score = 28.9 bits (63), Expect = 6.4
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 11/39 (28%)
Query: 26 SGSGSGGGGGGGGG-----------GGGSGGGGGGAPGG 53
SG G GGG G GG GGG GGG + G
Sbjct: 14 SGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSG 52
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 57.8 bits (138), Expect = 1e-08
Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 6 SGSE--QGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
SGS+ + G+G S G GSG GGGGGGGGGGGGSG GGG G
Sbjct: 361 SGSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSG 409
Score = 55.1 bits (131), Expect = 8e-08
Identities = 28/47 (59%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
S S GA+ SGG GSG G GGGGGGGGGG GS GGGG G
Sbjct: 369 STSTGAGASNSSGGG----GSGGGGGGGGGGGGGGSGSTGGGGSGAG 411
Score = 52.0 bits (123), Expect = 7e-07
Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 11 GGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGG-GAPGG 53
G + S S G S S GGG GGGGGGGG GGGGG G+ GG
Sbjct: 362 GSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGG 405
Score = 49.7 bits (117), Expect = 4e-06
Identities = 63/240 (26%), Positives = 93/240 (38%), Gaps = 32/240 (13%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGA---PGG--LQHETQE 60
S + G A S G G G G G GGGGGGG G G GG G G GG L +Q
Sbjct: 368 SSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGTYVIQGGYMLGSASQS 427
Query: 61 LA-SKRVDIQNKRFYLDVKQNAKGRFL----------------KIAEVGAGG-NKSRLTL 102
+ + R ++ LD + A+G L K+ V A K ++
Sbjct: 428 YSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSV 487
Query: 103 SMSVAVEFRDYLGDFIEHYAQLG-PSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKE 161
M + G+ HY L + P L +D+ A++ + ++ R LK
Sbjct: 488 FMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQR-----LKP 542
Query: 162 NQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEG 221
Q+ + V + P G + I+ Q +F DA L D ++ + LPEG
Sbjct: 543 IQKMEGMTNGVAVGQQPSTGLSD---ISAQVQQYQQFLDASRSLPDFTELDLQGKVLPEG 599
Score = 37.0 bits (84), Expect = 0.024
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 17 SGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
SG + + +G+G GGGG G GGGGGG GG
Sbjct: 361 SGSQVVASSTSTGAGASNSSGGGGSG-GGGGGGGGGG 396
Score = 28.5 bits (62), Expect = 8.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 14 ALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
A+ S GS+ SGS G G + GGGG+ GG
Sbjct: 349 AVASSGSMPMYVSGSQVVASSTSTGAGASNSSGGGGSGGG 388
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 57.4 bits (137), Expect = 2e-08
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 11 GGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G + L +G + +G+G GGGGGGGGGGGG+GGGGGG G
Sbjct: 12 GNSLLAAGSIVHSDAAGAGGGGGGGGGGGGGGAGGGGGGMQPG 54
Score = 53.1 bits (126), Expect = 3e-07
Identities = 25/49 (51%), Positives = 29/49 (59%)
Query: 1 MADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGG 49
MA S G +L + GS+ H + GGGGGGGGGGGG GGGGG
Sbjct: 1 MATAASNPYLPGNSLLAAGSIVHSDAAGAGGGGGGGGGGGGGGAGGGGG 49
Score = 42.7 bits (99), Expect = 4e-04
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
+GS A G+GG G G G GGGGG GGGGGG G G
Sbjct: 18 AGSIVHSDAAGAGGG----GGGGGGGGGGGAGGGGGGMQPGSAAVTSG 61
Score = 31.2 bits (69), Expect = 1.3
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 33 GGGGGGGGGGSGGGGGGAPGGLQHETQELA 62
G GGGGGG G G PG ++ +T ELA
Sbjct: 239 GPGGGGGGAGGGAQSLVHPGLVRGDTPELA 268
>gi|84570137 homeobox B3 [Homo sapiens]
Length = 431
Score = 57.4 bits (137), Expect = 2e-08
Identities = 28/44 (63%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 24 PGS--GSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELASKR 65
PG+ G G GGGGGGGGG GGSGGGGGG GG + ASKR
Sbjct: 147 PGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSPPGSAASKR 190
Score = 48.9 bits (115), Expect = 6e-06
Identities = 21/33 (63%), Positives = 22/33 (66%)
Query: 17 SGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGG 49
S G+ G G G GGGGG GG GGG GGGGGG
Sbjct: 146 SPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGG 178
Score = 48.5 bits (114), Expect = 8e-06
Identities = 23/41 (56%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 12 GAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
G A G GG G G G GG GG GGGGGG GGG PG
Sbjct: 148 GTAEGCGGG----GGGGGGGGSGGSGGGGGGGGGGDKSPPG 184
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/75 (28%), Positives = 30/75 (40%)
Query: 16 GSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELASKRVDIQNKRFYL 75
G GG G GSG GGGGGGGGG G + + +L + R+
Sbjct: 155 GGGGGGGGGGSGGSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLC 214
Query: 76 DVKQNAKGRFLKIAE 90
++ L ++E
Sbjct: 215 RPRRVEMANLLNLSE 229
Score = 36.6 bits (83), Expect = 0.031
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 1 MADRDSGSEQG-GAALGSGGSLGHPGSGSGSGGGGGGGGGGGGS 43
+ + G+ +G G G GG G GSG G GGGGGG GS
Sbjct: 142 LKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSPPGS 185
Score = 32.7 bits (73), Expect = 0.44
Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 28 SGSGGGGGGGGGGGGSGGGGG-GAPGG 53
+ S G G GGGGG GGGGG G GG
Sbjct: 144 NNSPGTAEGCGGGGGGGGGGGSGGSGG 170
Score = 31.2 bits (69), Expect = 1.3
Identities = 16/37 (43%), Positives = 16/37 (43%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGS 43
G GG G GGS G G G G GGG G S
Sbjct: 152 GCGGGGGGGGGGGSGGSGGGGGGGGGGDKSPPGSAAS 188
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 56.6 bits (135), Expect = 3e-08
Identities = 30/54 (55%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 2 ADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQ 55
A ++ + G AA SGGS G G G G GGGG G GGGG +GGGGG A GG Q
Sbjct: 785 ATNNANLQSGSAA--SGGS-GAGGGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQ 835
Score = 55.5 bits (132), Expect = 6e-08
Identities = 31/60 (51%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 2 ADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGG--GGGAPGGL-QHET 58
A+ SGS G + GG G G GSGSGGGG GGGGG +GGG PGG+ QH T
Sbjct: 789 ANLQSGSAASGGSGAGGGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQSTAGPGGISQHLT 848
Score = 45.1 bits (105), Expect = 9e-05
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 12 GAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
GA L + + + SGG G GGGGGGG GGG G GG
Sbjct: 780 GAILRATNNANLQSGSAASGGSGAGGGGGGGGGGGSGSGGGG 821
Score = 32.3 bits (72), Expect = 0.58
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 8 SEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
S +G L G++ + + G GG G GGGGGG GG
Sbjct: 769 SGKGKLLLIPQGAILRATNNANLQSGSAASGGSGAGGGGGGGGGGG 814
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 56.2 bits (134), Expect = 4e-08
Identities = 30/51 (58%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGG---GGGGGGGSGGGGGGAPGG 53
SG GG + G G S G G GS SGG GG GG GGG SGGGGGG GG
Sbjct: 495 SGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGG 545
Score = 53.9 bits (128), Expect = 2e-07
Identities = 27/49 (55%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGG--GGGAPGG 53
G GG G S GH GS SG GGG GGGGGG GGG GGG+ G
Sbjct: 506 GGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSG 554
Score = 52.0 bits (123), Expect = 7e-07
Identities = 23/47 (48%), Positives = 25/47 (53%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G GG + G G GH GS G GGG GGG G G GGG + GG
Sbjct: 475 GGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGG 521
Score = 50.4 bits (119), Expect = 2e-06
Identities = 23/47 (48%), Positives = 26/47 (55%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G +GG + G G G G GS GG GGG GG G G GGG + GG
Sbjct: 461 GGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGG 507
Score = 50.1 bits (118), Expect = 3e-06
Identities = 27/49 (55%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGG--SGGGGGGAPGG 53
GS GG G GGS G G SGGG GGG GGG SGG GG + GG
Sbjct: 481 GSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGG 529
Score = 49.3 bits (116), Expect = 5e-06
Identities = 23/47 (48%), Positives = 24/47 (51%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G GG + G G S G G G G GGG GGG G G GGG GG
Sbjct: 470 GGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGG 516
Score = 48.9 bits (115), Expect = 6e-06
Identities = 25/47 (53%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
GS GG GGS G G SGGG GGG GGG GG GG GG
Sbjct: 457 GSSGGGGR--GGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGG 501
Score = 48.9 bits (115), Expect = 6e-06
Identities = 26/58 (44%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGG-GGGGGGGGGGSGGGGGGAPGGLQHETQELAS 63
GS GG S G G SG G GG GGG GGG SGGG GG H++ S
Sbjct: 516 GSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGS 573
Score = 47.8 bits (112), Expect = 1e-05
Identities = 25/50 (50%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 4 RDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
R GS GG GS G G G G G G GG GGG GG GGG + GG
Sbjct: 464 RGGGSFGGGYGGGSSGG-GSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGG 512
Score = 47.0 bits (110), Expect = 2e-05
Identities = 26/65 (40%), Positives = 30/65 (46%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELASKRV 66
G GG + G G G G G GGGG GGG GGG GG GG G + Q L +
Sbjct: 99 GGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSGNEKVTMQNLNDRLA 158
Query: 67 DIQNK 71
+K
Sbjct: 159 SYLDK 163
Score = 46.6 bits (109), Expect = 3e-05
Identities = 26/47 (55%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 11 GGAALGSGGSLGHPGSGSGSGG--GGGGGGGGGGSGGG--GGGAPGG 53
GG G G G G GS GG GGG GGG GGS GG GGG+ GG
Sbjct: 460 GGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGG 506
Score = 46.2 bits (108), Expect = 4e-05
Identities = 21/44 (47%), Positives = 24/44 (54%)
Query: 10 QGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
+G + G GG G G GG GGG GGG GGG GG+ GG
Sbjct: 454 EGEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGG 497
Score = 45.4 bits (106), Expect = 7e-05
Identities = 27/49 (55%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGG--GGGGGGGGSGGGGGGAPGG 53
G GG+ GS GS GS GS GGG GGG GGGS GGGG GG
Sbjct: 78 GGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGG 126
Score = 45.4 bits (106), Expect = 7e-05
Identities = 26/48 (54%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 11 GGAALGS--GGSLGHPGSGSGSGGGG---GGGGGGGGSGGGGGGAPGG 53
G ++ G GGS G G GS GGG GGG GGGG GGG GG GG
Sbjct: 90 GSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGG 137
Score = 43.5 bits (101), Expect = 3e-04
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 9 EQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
E G++ G G G G G G G GGG GGG GG GG + GG
Sbjct: 454 EGEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGG 498
Score = 42.0 bits (97), Expect = 7e-04
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGG--GGGG--GGGGGGSGGGGGGAPGGLQHETQELA 62
GS G + G G G GS GG GGGG GGG GG GGG G GGL +++
Sbjct: 90 GSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSGNEKVT 149
Query: 63 SKRVD 67
+ ++
Sbjct: 150 MQNLN 154
Score = 41.2 bits (95), Expect = 0.001
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGG--GGGSGGGGGGAPG 52
SG GG++ G GG G SG GS GGG GGG GG G+ G
Sbjct: 527 SGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVG 575
Score = 39.3 bits (90), Expect = 0.005
Identities = 26/62 (41%), Positives = 26/62 (41%), Gaps = 13/62 (20%)
Query: 6 SGSEQGGAALGSGG---------SLGHPGSGSGSGGGGGG----GGGGGGSGGGGGGAPG 52
SG GG G GG S G G G SGG GG G GGG GG G G
Sbjct: 16 SGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYG 75
Query: 53 GL 54
GL
Sbjct: 76 GL 77
Score = 38.5 bits (88), Expect = 0.008
Identities = 21/41 (51%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 12 GAALGSGGSLGHPGSGSGSGGG--GGGGGGGGGSGGGGGGA 50
G SGG G S SGGG GG GG GG GG GGG+
Sbjct: 44 GGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLGGFGGGS 84
Score = 38.1 bits (87), Expect = 0.011
Identities = 22/43 (51%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 7 GSEQGGAALG--SGGSLGHPGSGSGSGGGGGGGGGGGGSGGGG 47
GS GG + G SGGS SG G GG GG GG G GGG
Sbjct: 41 GSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLGGFGGG 83
Score = 37.4 bits (85), Expect = 0.018
Identities = 27/60 (45%), Positives = 28/60 (46%), Gaps = 13/60 (21%)
Query: 7 GSEQGGAALGSGGSLGHPGS-GSGS----------GGGGGGGGGGGGSGGG--GGGAPGG 53
GS GG GS G G G G GS GG GG GGG GGG GGG+ GG
Sbjct: 60 GSSGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGG 119
Score = 36.2 bits (82), Expect = 0.040
Identities = 22/41 (53%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 14 ALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGG-GAPGG 53
+LG G S G GS S G GGG GG SGG GG G GG
Sbjct: 42 SLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLGGFGG 82
Score = 35.8 bits (81), Expect = 0.053
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 20 SLGHPGSGSGSGGGGGGGGGGGGSGGGGG 48
S+ + S S GGGGGGGG GGGGG
Sbjct: 2 SVRYSSSKHYSSSRSGGGGGGGGCGGGGG 30
Score = 32.7 bits (73), Expect = 0.44
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 18/46 (39%)
Query: 23 HPGSGSGSGGGGGGGGGGGG------------------SGGGGGGA 50
+ S SG GGGGGG GGGGG SGG GG+
Sbjct: 11 YSSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGS 56
Score = 31.6 bits (70), Expect = 0.99
Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 26/74 (35%)
Query: 1 MADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGG----------GGGGGGGSGGG---- 46
M+ R S S+ ++ GG G G G GGGGG G GGG S GG
Sbjct: 1 MSVRYSSSKHYSSSRSGGG-----GGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGG 55
Query: 47 -------GGGAPGG 53
GGG GG
Sbjct: 56 SFSRGSSGGGCFGG 69
Score = 30.0 bits (66), Expect = 2.9
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 37 GGGGGGSGGGGGGAPGGLQ 55
GGGGGG G GGGG L+
Sbjct: 17 GGGGGGGGCGGGGGVSSLR 35
>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
Length = 331
Score = 55.8 bits (133), Expect = 5e-08
Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 2 ADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGG-GGAPGGLQHETQE 60
A +G + G S ++ G G G GGGGGGGGGGGG GGGG GG GG + +E
Sbjct: 37 AKEPTGCTEAGRDDRSSPAVRAAGGGGGGGGGGGGGGGGGGVGGGGAGGGAGGGRSPVRE 96
Query: 61 L 61
L
Sbjct: 97 L 97
Score = 39.7 bits (91), Expect = 0.004
Identities = 20/48 (41%), Positives = 23/48 (47%)
Query: 5 DSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
+SG +G G S + GGGGGGGG GGGGGG G
Sbjct: 30 ESGPLRGAKEPTGCTEAGRDDRSSPAVRAAGGGGGGGGGGGGGGGGGG 77
Score = 29.6 bits (65), Expect = 3.8
Identities = 15/44 (34%), Positives = 18/44 (40%)
Query: 10 QGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
+ G G+ G +G GGG GGGGGG GG
Sbjct: 30 ESGPLRGAKEPTGCTEAGRDDRSSPAVRAAGGGGGGGGGGGGGG 73
>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
Length = 711
Score = 55.8 bits (133), Expect = 5e-08
Identities = 50/149 (33%), Positives = 59/149 (39%), Gaps = 37/149 (24%)
Query: 11 GGAALGSGGSL--GHPGSGSGSGGGGGGGGGGGGSGGG-----GGGAPGGLQHETQELAS 63
GG A G+GG G PG+G GGG GGGG GGGS GG GGG PG
Sbjct: 20 GGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGGPG----------- 68
Query: 64 KRVDIQNKRFYLDVKQNAKGRFLKIA------------EVGAGGNKSRLTLSMSVAVEFR 111
K + D Q A+ KI + G GG K +L +
Sbjct: 69 -----IRKDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESKKL 123
Query: 112 DYLGDFIEHYAQLGPSQPPDLAQAQDEPR 140
GD I +QLGP PP +E R
Sbjct: 124 ASQGDSIS--SQLGPIHPPPRTSMTEEYR 150
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 55.8 bits (133), Expect = 5e-08
Identities = 22/30 (73%), Positives = 23/30 (76%)
Query: 24 PGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
PG+G G GGGGGGGGG GG GGGGG GG
Sbjct: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGG 275
Score = 52.4 bits (124), Expect = 5e-07
Identities = 21/31 (67%), Positives = 23/31 (74%)
Query: 22 GHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
G+ G+G GGGGGGGGGGG GGGGGG G
Sbjct: 242 GYSRPGAGGGGGGGGGGGGGSGGGGGGGGAG 272
Score = 51.6 bits (122), Expect = 9e-07
Identities = 48/162 (29%), Positives = 57/162 (35%), Gaps = 37/162 (22%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGG-----------------SGGGGGG 49
G + GA G GG G G GSGGGGGGGG G G +GGGGGG
Sbjct: 242 GYSRPGAGGGGGGG---GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGG 298
Query: 50 APGGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLT-------- 101
GG L+S R Q + K A A G R
Sbjct: 299 GYGGSSAGYGVLSSPRQ--QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSG 356
Query: 102 -------LSMSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQ 136
L S + R Y G + E+ + P PP Q+Q
Sbjct: 357 ATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398
Score = 49.3 bits (116), Expect = 5e-06
Identities = 20/31 (64%), Positives = 21/31 (67%)
Query: 23 HPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
+PG GGGGGGGGGGG G GGGG GG
Sbjct: 240 YPGYSRPGAGGGGGGGGGGGGGSGGGGGGGG 270
Score = 34.7 bits (78), Expect = 0.12
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 8/48 (16%)
Query: 13 AALGSGGSL--------GHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
AA G+ GS+ G+P S G G GGG GGGGGG G
Sbjct: 214 AAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGG 261
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 55.8 bits (133), Expect = 5e-08
Identities = 22/30 (73%), Positives = 23/30 (76%)
Query: 24 PGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
PG+G G GGGGGGGGG GG GGGGG GG
Sbjct: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGG 275
Score = 52.4 bits (124), Expect = 5e-07
Identities = 21/31 (67%), Positives = 23/31 (74%)
Query: 22 GHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
G+ G+G GGGGGGGGGGG GGGGGG G
Sbjct: 242 GYSRPGAGGGGGGGGGGGGGSGGGGGGGGAG 272
Score = 51.6 bits (122), Expect = 9e-07
Identities = 48/162 (29%), Positives = 57/162 (35%), Gaps = 37/162 (22%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGG-----------------SGGGGGG 49
G + GA G GG G G GSGGGGGGGG G G +GGGGGG
Sbjct: 242 GYSRPGAGGGGGGG---GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGG 298
Query: 50 APGGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLT-------- 101
GG L+S R Q + K A A G R
Sbjct: 299 GYGGSSAGYGVLSSPRQ--QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSG 356
Query: 102 -------LSMSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQ 136
L S + R Y G + E+ + P PP Q+Q
Sbjct: 357 ATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398
Score = 49.3 bits (116), Expect = 5e-06
Identities = 20/31 (64%), Positives = 21/31 (67%)
Query: 23 HPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
+PG GGGGGGGGGGG G GGGG GG
Sbjct: 240 YPGYSRPGAGGGGGGGGGGGGGSGGGGGGGG 270
Score = 34.7 bits (78), Expect = 0.12
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 8/48 (16%)
Query: 13 AALGSGGSL--------GHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
AA G+ GS+ G+P S G G GGG GGGGGG G
Sbjct: 214 AAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGG 261
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 55.8 bits (133), Expect = 5e-08
Identities = 22/30 (73%), Positives = 23/30 (76%)
Query: 24 PGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
PG+G G GGGGGGGGG GG GGGGG GG
Sbjct: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGG 275
Score = 52.4 bits (124), Expect = 5e-07
Identities = 21/31 (67%), Positives = 23/31 (74%)
Query: 22 GHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
G+ G+G GGGGGGGGGGG GGGGGG G
Sbjct: 242 GYSRPGAGGGGGGGGGGGGGSGGGGGGGGAG 272
Score = 51.6 bits (122), Expect = 9e-07
Identities = 48/162 (29%), Positives = 57/162 (35%), Gaps = 37/162 (22%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGG-----------------SGGGGGG 49
G + GA G GG G G GSGGGGGGGG G G +GGGGGG
Sbjct: 242 GYSRPGAGGGGGGG---GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGG 298
Query: 50 APGGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLT-------- 101
GG L+S R Q + K A A G R
Sbjct: 299 GYGGSSAGYGVLSSPRQ--QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSG 356
Query: 102 -------LSMSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQ 136
L S + R Y G + E+ + P PP Q+Q
Sbjct: 357 ATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398
Score = 49.3 bits (116), Expect = 5e-06
Identities = 20/31 (64%), Positives = 21/31 (67%)
Query: 23 HPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
+PG GGGGGGGGGGG G GGGG GG
Sbjct: 240 YPGYSRPGAGGGGGGGGGGGGGSGGGGGGGG 270
Score = 34.7 bits (78), Expect = 0.12
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 8/48 (16%)
Query: 13 AALGSGGSL--------GHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
AA G+ GS+ G+P S G G GGG GGGGGG G
Sbjct: 214 AAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGG 261
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 55.5 bits (132), Expect = 6e-08
Identities = 29/53 (54%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 19 GSLGHPGSGSGSGGGGGGGGGGGGSGGGGGG----APGGLQHETQELASKRVD 67
G L P G G GGGGGGGGGGGG GGGGG AP G Q LA + D
Sbjct: 444 GQLYGPCGGGGGGGGGGGGGGGGGGGGGGGEAGAVAPYGYTRPPQGLAGQESD 496
Score = 45.8 bits (107), Expect = 5e-05
Identities = 28/60 (46%), Positives = 30/60 (50%), Gaps = 20/60 (33%)
Query: 13 AALGSGGSLGHPGSGSGS-------------------GGGGGGGGGGGGSGGGGGGAPGG 53
A+L G+ G PGSGS S G GGGGGGGGG GGGGGG GG
Sbjct: 412 ASLHGAGAAG-PGSGSPSAAASSSWHTLFTAEEGQLYGPCGGGGGGGGGGGGGGGGGGGG 470
Score = 38.9 bits (89), Expect = 0.006
Identities = 21/55 (38%), Positives = 25/55 (45%)
Query: 12 GAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELASKRV 66
G G GG G G G G GGGGGGG G + G P GL + + + V
Sbjct: 448 GPCGGGGGGGGGGGGGGGGGGGGGGGEAGAVAPYGYTRPPQGLAGQESDFTAPDV 502
Score = 32.7 bits (73), Expect = 0.44
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 281 IQEKQREKRAACEQLHQQQQQQQEETAAATLLLQGEEEG 319
+Q++Q++++ +Q QQQQQQQ+ET+ Q E+G
Sbjct: 57 LQQQQQQQQQQQQQQQQQQQQQQQETSPRQQQQQQGEDG 95
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 55.1 bits (131), Expect = 8e-08
Identities = 24/39 (61%), Positives = 26/39 (66%)
Query: 12 GAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGA 50
GAA+G G G G G GGGGGGG GGGG GGGGG+
Sbjct: 626 GAAVGGGAGATAAGGGGGPGGGGGGGPGGGGGPGGGGGS 664
Score = 48.1 bits (113), Expect = 1e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 18 GGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G ++G + +GGGGG GGGGGG GGGGG GG
Sbjct: 626 GAAVGGGAGATAAGGGGGPGGGGGGGPGGGGGPGGG 661
Score = 43.5 bits (101), Expect = 3e-04
Identities = 21/34 (61%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 11 GGAALGSGGSLGHPGSGSGSGGGGGGG-GGGGGS 43
GGA + G G PG G G G GGGGG GGGGGS
Sbjct: 631 GGAGATAAGGGGGPGGGGGGGPGGGGGPGGGGGS 664
Score = 39.7 bits (91), Expect = 0.004
Identities = 18/34 (52%), Positives = 18/34 (52%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGG 40
G G A G GG G G G GGGG GGGGG
Sbjct: 630 GGGAGATAAGGGGGPGGGGGGGPGGGGGPGGGGG 663
Score = 38.9 bits (89), Expect = 0.006
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 27 GSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELAS 63
G+G GG GG G G+ G G G PGG + E +EL +
Sbjct: 346 GAGGAGGAGGAAAGAGAAGAGAGGPGG-RGEYEELGA 381
Score = 37.4 bits (85), Expect = 0.018
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 12 GAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSG 44
G A G+GG+ G G+ +G+G G G GG GG G
Sbjct: 342 GGAPGAGGAGGAGGAAAGAGAAGAGAGGPGGRG 374
Score = 36.2 bits (82), Expect = 0.040
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 17 SGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGG 48
SGG+ G G+G G G G G G+GG GG
Sbjct: 341 SGGAPGAGGAGGAGGAAAGAGAAGAGAGGPGG 372
Score = 35.8 bits (81), Expect = 0.053
Identities = 23/54 (42%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 9 EQGGAALGSGGSLG----HPGSGSGSGGGG-------GGGGGGGGSGGGGGGAP 51
EQ + G G G H G G G GGG GGGGGG GGG AP
Sbjct: 174 EQPPSGSGHGRPPGARPPHRGGGRGGGGGDAAAPPARGGGGGGKARPPGGGAAP 227
Score = 35.8 bits (81), Expect = 0.053
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGG 47
+G E+ + G+ G+ G G+G + G G G G GG GG G
Sbjct: 333 AGHEKVACSGGAPGAGGAGGAGGAAAGAGAAGAGAGGPGGRG 374
Score = 32.0 bits (71), Expect = 0.76
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 26 SGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
+ G+ GGG G G GGG GG GG
Sbjct: 623 ASKGAAVGGGAGATAAGGGGGPGGGGGG 650
Score = 31.2 bits (69), Expect = 1.3
Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 22/52 (42%)
Query: 24 PGSGSGSGGG------------GGGGGGGGGS-------GGGGGG---APGG 53
PG SG G GGG GGGGG GGGGGG PGG
Sbjct: 172 PGEQPPSGSGHGRPPGARPPHRGGGRGGGGGDAAAPPARGGGGGGKARPPGG 223
Score = 30.4 bits (67), Expect = 2.2
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 12 GAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G L S SL + G GGG G +GGGGG GG
Sbjct: 607 GKTLESWRSLCTRCCWASKGAAVGGGAGATAAGGGGGPGGGG 648
>gi|154091020 leucine-rich repeats and calponin homology (CH)
domain containing 2 [Homo sapiens]
Length = 765
Score = 55.1 bits (131), Expect = 8e-08
Identities = 24/42 (57%), Positives = 25/42 (59%)
Query: 8 SEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGG 49
+ QGG GG G GS G G GGGGGG GG GGGGGG
Sbjct: 3 ASQGGGGNSGGGGCGGGGSSGGCGTAGGGGGGAGGGGGGGGG 44
Score = 52.0 bits (123), Expect = 7e-07
Identities = 26/49 (53%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGL 54
+ S+ GG G GG G G SGG G GGGGGG+GGGGGG G L
Sbjct: 2 AASQGGGGNSGGGGC----GGGGSSGGCGTAGGGGGGAGGGGGGGGGTL 46
Score = 51.2 bits (121), Expect = 1e-06
Identities = 22/41 (53%), Positives = 24/41 (58%)
Query: 2 ADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGG 42
A + G GG G GGS G G+ G GGG GGGGGGGG
Sbjct: 3 ASQGGGGNSGGGGCGGGGSSGGCGTAGGGGGGAGGGGGGGG 43
>gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo
sapiens]
Length = 3258
Score = 54.7 bits (130), Expect = 1e-07
Identities = 25/44 (56%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 11 GGAALGSGG-SLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G + G GG ++ G G G GGGG GGGGGG GGGGGG GG
Sbjct: 723 GSSTCGFGGPAVSGAGDGGGEEGGGGDGGGGGGDGGGGGGGGGG 766
Score = 41.6 bits (96), Expect = 0.001
Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGG 42
SG+ GG G GG G G G GGGGGGGGGG
Sbjct: 735 SGAGDGGGEEGGGGD-----GGGGGGDGGGGGGGGGG 766
Score = 40.8 bits (94), Expect = 0.002
Identities = 21/38 (55%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 17 SGGSL-GHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
SG S G G G GGG GGGG GGGGGG GG
Sbjct: 722 SGSSTCGFGGPAVSGAGDGGGEEGGGGDGGGGGGDGGG 759
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 15/43 (34%)
Query: 5 DSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGG 47
D G E+GG GGGGGG GGGGG GGGG
Sbjct: 739 DGGGEEGGGG---------------DGGGGGGDGGGGGGGGGG 766
Score = 33.1 bits (74), Expect = 0.34
Identities = 17/38 (44%), Positives = 17/38 (44%)
Query: 16 GSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
G GS G G G GGG GG G GGGG G
Sbjct: 720 GVSGSSTCGFGGPAVSGAGDGGGEEGGGGDGGGGGGDG 757
>gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens]
Length = 332
Score = 54.7 bits (130), Expect = 1e-07
Identities = 26/44 (59%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 8 SEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAP 51
S GG G GG G GSG G+G GGGG GG GG GGGG AP
Sbjct: 31 SSGGGNGAGGGGGAGG-GSGGGNGAGGGGAGGAGGGGGGGSRAP 73
Score = 53.9 bits (128), Expect = 2e-07
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 14 ALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELA 62
A GG+ G G+G G GGG G GGGG+GG GGG GG + +EL+
Sbjct: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELS 78
Score = 49.7 bits (117), Expect = 4e-06
Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 21 LGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
L G G+G+GGGGG GGG GG G GGG GG
Sbjct: 29 LASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGG 61
Score = 44.3 bits (103), Expect = 1e-04
Identities = 20/41 (48%), Positives = 23/41 (56%)
Query: 1 MADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGG 41
+A G+ GG GGS G G+G G GG GGGGGGG
Sbjct: 29 LASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 54.7 bits (130), Expect = 1e-07
Identities = 27/44 (61%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 11 GGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGL 54
G AA +GG+ G G G S GGGGGGGGGGG GGG GA G L
Sbjct: 204 GSAAASAGGAGGAGGGGPASAGGGGGGGGGGG-GGGAAGAGGAL 246
Score = 52.8 bits (125), Expect = 4e-07
Identities = 28/56 (50%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGG----GAPGGLQHE 57
S + G A G+GG G P S G GGGGGGGGGGG +G GG A GGL +
Sbjct: 205 SAAASAGGAGGAGG--GGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFD 258
Score = 52.0 bits (123), Expect = 7e-07
Identities = 25/43 (58%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 14 ALGSGGSLGHPGSGSGSGGGGG----GGGGGGGSGGGGGGAPG 52
A G+ GS G+G GGGG GGGGGGG GGGGGGA G
Sbjct: 199 APGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAG 241
Score = 50.1 bits (118), Expect = 3e-06
Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 12 GAALGSGGSLGHPGSGSGSGGGG----GGGGGGGGSGGGGGGAPGG 53
GA +G + G G+GGGG GGGGGGGG GGGGG A G
Sbjct: 198 GAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAG 243
Score = 46.2 bits (108), Expect = 4e-05
Identities = 22/41 (53%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 17 SGGSLGHPGSGSGSGGGGGGGGGGG----GSGGGGGGAPGG 53
+ G+ G GS + S GG GG GGGG G GGGGGG GG
Sbjct: 196 TAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGG 236
Score = 32.3 bits (72), Expect = 0.58
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELASKR 65
+G GG +GG G G G G GGG G GG GG + ++L +
Sbjct: 213 AGGAGGGGPASAGGGGG--GGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMS 270
Query: 66 VDIQNKR 72
V N++
Sbjct: 271 VRELNRQ 277
Score = 32.0 bits (71), Expect = 0.76
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 17 SGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAP 51
+ G HP +G+ G G GG+GG GGG P
Sbjct: 188 AAGHHHHPTAGA-PGAAGSAAASAGGAGGAGGGGP 221
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 54.7 bits (130), Expect = 1e-07
Identities = 27/44 (61%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 11 GGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGL 54
G AA +GG+ G G G S GGGGGGGGGGG GGG GA G L
Sbjct: 204 GSAAASAGGAGGAGGGGPASAGGGGGGGGGGG-GGGAAGAGGAL 246
Score = 52.8 bits (125), Expect = 4e-07
Identities = 28/56 (50%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGG----GAPGGLQHE 57
S + G A G+GG G P S G GGGGGGGGGGG +G GG A GGL +
Sbjct: 205 SAAASAGGAGGAGG--GGPASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFD 258
Score = 52.0 bits (123), Expect = 7e-07
Identities = 25/43 (58%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 14 ALGSGGSLGHPGSGSGSGGGGG----GGGGGGGSGGGGGGAPG 52
A G+ GS G+G GGGG GGGGGGG GGGGGGA G
Sbjct: 199 APGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAG 241
Score = 50.1 bits (118), Expect = 3e-06
Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 12 GAALGSGGSLGHPGSGSGSGGGG----GGGGGGGGSGGGGGGAPGG 53
GA +G + G G+GGGG GGGGGGGG GGGGG A G
Sbjct: 198 GAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAG 243
Score = 46.2 bits (108), Expect = 4e-05
Identities = 22/41 (53%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 17 SGGSLGHPGSGSGSGGGGGGGGGGG----GSGGGGGGAPGG 53
+ G+ G GS + S GG GG GGGG G GGGGGG GG
Sbjct: 196 TAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGG 236
Score = 32.3 bits (72), Expect = 0.58
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELASKR 65
+G GG +GG G G G G GGG G GG GG + ++L +
Sbjct: 213 AGGAGGGGPASAGGGGG--GGGGGGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMS 270
Query: 66 VDIQNKR 72
V N++
Sbjct: 271 VRELNRQ 277
Score = 32.0 bits (71), Expect = 0.76
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 17 SGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAP 51
+ G HP +G+ G G GG+GG GGG P
Sbjct: 188 AAGHHHHPTAGA-PGAAGSAAASAGGAGGAGGGGP 221
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 54.7 bits (130), Expect = 1e-07
Identities = 31/52 (59%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSG---SGGGG--GGGGGGGGSGGGGGGAPGG 53
GS GG GG G SGSG SGGGG GGG GGG SGGGGGG GG
Sbjct: 28 GSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGG 79
Score = 53.5 bits (127), Expect = 2e-07
Identities = 26/50 (52%), Positives = 31/50 (62%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQH 56
GS G + G G S G SG G GGG GGGGGGG GG GGG+ G +++
Sbjct: 41 GSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKY 90
Score = 52.4 bits (124), Expect = 5e-07
Identities = 28/58 (48%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGG-----GGGSGG-----GGGGAPGG 53
SG G+ G G G+ G G G G GGGGGG GGGSGG GGGG+ GG
Sbjct: 42 SGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGG 99
Score = 49.3 bits (116), Expect = 5e-06
Identities = 29/66 (43%), Positives = 32/66 (48%), Gaps = 19/66 (28%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGG----------------GGGGGGGGGSG---GGG 47
G GG GSGGS+ + G G SGGG GGGG GGGSG GG
Sbjct: 74 GGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGG 133
Query: 48 GGAPGG 53
GG+ GG
Sbjct: 134 GGSSGG 139
Score = 48.1 bits (113), Expect = 1e-05
Identities = 25/48 (52%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSG-GGGGGAPGG 53
G GG + GSG G SG G GGG GGGGG G GG GG GG
Sbjct: 39 GGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGG 86
Score = 47.4 bits (111), Expect = 2e-05
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG-GLQHETQE 60
SG G + +GSG + G GS GGG GGGGGG S GG G G + H+TQ+
Sbjct: 250 SGCGGGSSGIGSGCIIS--GGGSVCGGGSSGGGGGGSSVGGSGSGKGVPICHQTQQ 303
Score = 47.0 bits (110), Expect = 2e-05
Identities = 30/65 (46%), Positives = 32/65 (49%), Gaps = 17/65 (26%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGG-----GGGGGGGGG------GSGG------GGG 48
SG GG + G GG G G G GSGG GGGG GGG G GG GGG
Sbjct: 60 SGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGG 119
Query: 49 GAPGG 53
G+ GG
Sbjct: 120 GSSGG 124
Score = 44.3 bits (103), Expect = 1e-04
Identities = 24/58 (41%), Positives = 24/58 (41%), Gaps = 12/58 (20%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGG------------GSGGGGGGAPG 52
GS G GG G G GS GGGGGGG GG G GG GG G
Sbjct: 45 GSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSG 102
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/59 (42%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Query: 7 GSEQGGAALGSGGS-------------LGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPG 52
GS GG + G GS P G GS GGGG GG G S GGGGG+ G
Sbjct: 193 GSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGSGCFSSGGGGGSSG 251
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/50 (50%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGG----GGG---GGGSGGGGGG 49
G G SGG G G G GS G G G GGG GGGS GGGGG
Sbjct: 233 GGSGGSGCFSSGGGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSGGGGG 282
Score = 43.5 bits (101), Expect = 3e-04
Identities = 23/45 (51%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 11 GGAALGSGGSLGHPGSGSG---SGGGGGGGGGGGGSGGGGGGAPG 52
GG+ S G G G GSG SGGGG GGG G GGGG G
Sbjct: 109 GGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSG 153
Score = 43.1 bits (100), Expect = 3e-04
Identities = 23/46 (50%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGG--GGGGGGSGGGGGG 49
SG G + G GGS G GS GGG G GGGGS GGG G
Sbjct: 97 SGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSG 142
Score = 42.4 bits (98), Expect = 6e-04
Identities = 22/42 (52%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 16 GSGGSLGHPGSGSGSGGGGGGGGGGGGS----GGGGGGAPGG 53
G GG G G G G GGGG GGG GS GGGG + GG
Sbjct: 22 GGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGG 63
Score = 41.6 bits (96), Expect = 0.001
Identities = 25/57 (43%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 10 QGGAALGSGGSLGHPGSGSGSGGGGGGG-----GGGGGSGGGGGGAPGGLQHETQEL 61
Q + SGGS G GSG S GGGGG GGG G GGG G G +Q++
Sbjct: 159 QSYGGVSSGGSSGG-GSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQV 214
Score = 40.8 bits (94), Expect = 0.002
Identities = 29/69 (42%), Positives = 31/69 (44%), Gaps = 22/69 (31%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSG---SGGGG---------------GGGGGGGGSG---- 44
GS GG+ S G G G GSG SGGGG GG GGGSG
Sbjct: 120 GSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSS 179
Query: 45 GGGGGAPGG 53
GGGGG+ G
Sbjct: 180 GGGGGSVCG 188
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/54 (46%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQ 59
SG GG GSG G GS G GGG G GGGS GG G Q TQ
Sbjct: 166 SGGSSGG---GSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQ 216
Score = 38.5 bits (88), Expect = 0.008
Identities = 18/36 (50%), Positives = 18/36 (50%)
Query: 18 GGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
GGS G GSG GGGGG G GGG G G
Sbjct: 227 GGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIGSG 262
Score = 38.1 bits (87), Expect = 0.011
Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 20 SLGHPGSGSGSGGGGG--GGGGGGGSGGGGGGAPG 52
S G SG G GG G GGGGGS G GGG+ G
Sbjct: 224 SYGGGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSG 258
Score = 35.8 bits (81), Expect = 0.053
Identities = 26/62 (41%), Positives = 27/62 (43%), Gaps = 14/62 (22%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSGSGGGGGGG----GGGGGSG--------GG--GGGAP 51
SG G SGG G SG G GGG G GGGG SG GG GG+
Sbjct: 111 SGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSS 170
Query: 52 GG 53
GG
Sbjct: 171 GG 172
Score = 35.8 bits (81), Expect = 0.053
Identities = 24/63 (38%), Positives = 24/63 (38%), Gaps = 16/63 (25%)
Query: 6 SGSEQGGAALGSGGSLGHPGSGSG----------------SGGGGGGGGGGGGSGGGGGG 49
SG G SGG G SG G SGG GGG G SGGGGG
Sbjct: 126 SGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGS 185
Query: 50 APG 52
G
Sbjct: 186 VCG 188
>gi|12056465 fibrillarin [Homo sapiens]
Length = 321
Score = 54.3 bits (129), Expect = 1e-07
Identities = 26/49 (53%), Positives = 26/49 (53%)
Query: 5 DSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGG 53
D G G G G G G G GGGGGGGGGGGG GGGG GG
Sbjct: 20 DRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGG 68
Score = 51.6 bits (122), Expect = 9e-07
Identities = 30/73 (41%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 3 DRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGG---GGGAPGGLQHETQ 59
DR +GG G G G G G G GGGGGGGGGGG GGG GG G +
Sbjct: 20 DRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKRG 79
Query: 60 ELASKRVDIQNKR 72
+ K V ++ R
Sbjct: 80 NQSGKNVMVEPHR 92
Score = 48.9 bits (115), Expect = 6e-06
Identities = 27/62 (43%), Positives = 27/62 (43%), Gaps = 12/62 (19%)
Query: 7 GSEQGGAALGSGGSLGHPGSGSGSGGGGGG------------GGGGGGSGGGGGGAPGGL 54
G G G G G G G GG GGG GGGGGG GGGGGG GG
Sbjct: 4 GFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGG 63
Query: 55 QH 56
H
Sbjct: 64 FH 65
Score = 46.2 bits (108), Expect = 4e-05
Identities = 26/50 (52%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 4 RDSGSEQGGAALGSGGSLGHPGSGSG-SGGGGGGGGGGGGSGGGGGGAPG 52
R ++GG G GG G G G G G G GGGGGGGG GGGG G G
Sbjct: 15 RGGFGDRGGRG-GRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGG 63
Score = 31.2 bits (69), Expect = 1.3
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 29/59 (49%)
Query: 24 PGSGSGSGGGGG-----------------------------GGGGGGGSGGGGGGAPGG 53
PG GG GG G GGGGG GGGGGG GG
Sbjct: 3 PGFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGGGGGGGGGGGGGRGG 61
>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
Length = 474
Score = 53.1 bits (126), Expect = 3e-07
Identities = 40/111 (36%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 5 DSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGG-GGSGGGGGGAPGGLQHETQELAS 63
++ S AA G G GSG GG GGGGGGG +GGGGGGA GG +
Sbjct: 138 NANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGGGGGASGG--------GA 189
Query: 64 KRVDIQNKRFYLDVKQNAKGRFLK-----IAEVGAGGNKSRLTLSMSVAVE 109
Q K V A G K I G GG K+ + S A E
Sbjct: 190 NSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFAAE 240
Score = 38.9 bits (89), Expect = 0.006
Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 25/72 (34%)
Query: 3 DRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGG---------------GGGGGGG----- 42
D+ GS GG G GG + G G G GGG GG GGG
Sbjct: 156 DKVGGSGGGGHGGGGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPH 215
Query: 43 -----SGGGGGG 49
+GGGGGG
Sbjct: 216 AKLILAGGGGGG 227
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,180,504
Number of Sequences: 37866
Number of extensions: 812592
Number of successful extensions: 41591
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 13132
Number of HSP's gapped (non-prelim): 12668
length of query: 322
length of database: 18,247,518
effective HSP length: 102
effective length of query: 220
effective length of database: 14,385,186
effective search space: 3164740920
effective search space used: 3164740920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.