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Search of human proteins with 5031985
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5031985 nuclear transport factor 2 [Homo sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5031985 nuclear transport factor 2 [Homo sapiens] 268 8e-73
gi|17451119 PREDICTED: similar to nuclear transport factor 2 [Ho... 232 7e-62
gi|88952306 PREDICTED: similar to nuclear transport factor 2 [Ho... 229 3e-61
gi|169160905 PREDICTED: similar to nuclear transport factor 2 [H... 228 1e-60
gi|7019471 NTF2-like export factor 1 [Homo sapiens] 49 1e-06
gi|21361724 nuclear transport factor 2-like export factor 2 [Hom... 45 1e-05
gi|19923399 Ras-GTPase activating protein SH3 domain-binding pro... 38 0.002
gi|45359849 Ras-GTPase activating protein SH3 domain-binding pro... 38 0.002
gi|45359846 Ras-GTPase activating protein SH3 domain-binding pro... 38 0.002
gi|5031703 Ras-GTPase-activating protein SH3-domain-binding prot... 37 0.004
gi|38327552 Ras-GTPase-activating protein SH3-domain-binding pro... 37 0.004
gi|4503143 cathepsin D preproprotein [Homo sapiens] 27 3.2
gi|239787086 zinc finger protein 611 isoform b [Homo sapiens] 27 4.2
gi|239787084 zinc finger protein 611 isoform a [Homo sapiens] 27 4.2
gi|239787082 zinc finger protein 611 isoform a [Homo sapiens] 27 4.2
gi|239787080 zinc finger protein 611 isoform a [Homo sapiens] 27 4.2
gi|156766086 zinc finger protein 600 [Homo sapiens] 27 4.2
gi|157167158 zinc finger protein 808 [Homo sapiens] 27 4.2
gi|119220559 phosphoribosylaminoimidazole carboxylase, phosphori... 27 5.5
gi|39777599 transglutaminase 2 isoform b [Homo sapiens] 26 7.2
gi|39777597 transglutaminase 2 isoform a [Homo sapiens] 26 7.2
gi|34452681 ring finger protein 10 [Homo sapiens] 26 7.2
gi|210031219 zinc finger protein 845 [Homo sapiens] 26 7.2
gi|72384363 zinc finger protein 321 [Homo sapiens] 26 7.2
gi|108796666 zinc finger protein 813 [Homo sapiens] 26 7.2
gi|116805332 musculin [Homo sapiens] 26 9.4
gi|38202237 transcription factor 21 [Homo sapiens] 26 9.4
gi|38202239 transcription factor 21 [Homo sapiens] 26 9.4
>gi|5031985 nuclear transport factor 2 [Homo sapiens]
Length = 127
Score = 268 bits (685), Expect = 8e-73
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MGDKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLP 60
MGDKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLP
Sbjct: 1 MGDKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLP 60
Query: 61 FQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFR 120
FQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFR
Sbjct: 61 FQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFR 120
Query: 121 LALHNFG 127
LALHNFG
Sbjct: 121 LALHNFG 127
>gi|17451119 PREDICTED: similar to nuclear transport factor 2 [Homo
sapiens]
Length = 126
Score = 232 bits (591), Expect = 7e-62
Identities = 111/127 (87%), Positives = 117/127 (92%), Gaps = 1/127 (0%)
Query: 1 MGDKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLP 60
MGDKP+WE IGSSF QHYYQLFDNDRTQLGAIYIDASCLTWE +QFQGKAA VEKLSSLP
Sbjct: 1 MGDKPVWEPIGSSFNQHYYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLP 60
Query: 61 FQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFR 120
FQKIQ+S+TAQDHQPTPDSCII +VVGQLKADEDPI GFHQMFLLKNIND + C NDMFR
Sbjct: 61 FQKIQNSLTAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLLKNINDGF-CANDMFR 119
Query: 121 LALHNFG 127
ALHNFG
Sbjct: 120 FALHNFG 126
>gi|88952306 PREDICTED: similar to nuclear transport factor 2 [Homo
sapiens]
Length = 126
Score = 229 bits (585), Expect = 3e-61
Identities = 110/127 (86%), Positives = 116/127 (91%), Gaps = 1/127 (0%)
Query: 1 MGDKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLP 60
MGDKP+WE IGSSF QHYYQLFDNDRTQLGAIYIDASCLTWE +QFQGKAA VEKLSSLP
Sbjct: 1 MGDKPVWEPIGSSFNQHYYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLP 60
Query: 61 FQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFR 120
FQKIQ+S+ AQDHQPTPDSCII +VVGQLKADEDPI GFHQMFLLKNIND + C NDMFR
Sbjct: 61 FQKIQNSLRAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLLKNINDGF-CANDMFR 119
Query: 121 LALHNFG 127
ALHNFG
Sbjct: 120 FALHNFG 126
>gi|169160905 PREDICTED: similar to nuclear transport factor 2 [Homo
sapiens]
Length = 340
Score = 228 bits (580), Expect = 1e-60
Identities = 109/126 (86%), Positives = 115/126 (91%), Gaps = 1/126 (0%)
Query: 2 GDKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPF 61
GDKP+WE IGSSF QHYYQLFDNDRTQLGAIYIDASCLTWE +QFQGKAA VEKLSSLPF
Sbjct: 216 GDKPVWEPIGSSFNQHYYQLFDNDRTQLGAIYIDASCLTWEVRQFQGKAAAVEKLSSLPF 275
Query: 62 QKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRL 121
QKIQ+S+ AQDHQPTPDSCII +VVGQLKADEDPI GFHQMFLLKNIND + C NDMFR
Sbjct: 276 QKIQNSLRAQDHQPTPDSCIIGVVVGQLKADEDPIKGFHQMFLLKNINDGF-CANDMFRF 334
Query: 122 ALHNFG 127
ALHNFG
Sbjct: 335 ALHNFG 340
>gi|7019471 NTF2-like export factor 1 [Homo sapiens]
Length = 140
Score = 48.9 bits (115), Expect = 1e-06
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 14 FIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDH 73
F+ YY D R L +Y+ + L W G G+ ++ E LP + Q S+ D
Sbjct: 20 FVNVYYTTMDKRRRLLSRLYMGTATLVWNGNAVSGQESLSEFFEMLPSSEFQISVV--DC 77
Query: 74 QPTPD------SCIISMVVGQLKADEDPIMGFHQMFLL----KNINDAWVCTNDMFR 120
QP D + ++ ++ G +K + + F+Q F+L N W +D FR
Sbjct: 78 QPVHDEATPSQTTVLVVICGSVKFEGNKQRDFNQNFILTAQASPSNTVWKIASDCFR 134
>gi|21361724 nuclear transport factor 2-like export factor 2 [Homo
sapiens]
Length = 197
Score = 45.4 bits (106), Expect = 1e-05
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 14 FIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDH 73
F+ YY+ D R L +Y+D + L W G G A+ +LP + Q + D
Sbjct: 76 FVNIYYETMDKRRRALTRLYLDKATLIWNGNAVSGLDALNNFFDTLPSSEFQ--VNMLDC 133
Query: 74 QPTPD------SCIISMVVGQLKADEDPIMGFHQMFLL----KNINDAWVCTNDMFR 120
QP + + ++ + G +K D + F+Q FLL N W +D FR
Sbjct: 134 QPVHEQATQSQTTVLVVTSGTVKFDGNKQHFFNQNFLLTAQSTPNNTVWKIASDCFR 190
>gi|19923399 Ras-GTPase activating protein SH3 domain-binding
protein 2 isoform a [Homo sapiens]
Length = 482
Score = 38.1 bits (87), Expect = 0.002
Identities = 36/136 (26%), Positives = 51/136 (37%), Gaps = 11/136 (8%)
Query: 3 DKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAA--------IVE 54
+KP +G F++ YY L + L Y S G GK I
Sbjct: 4 EKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHH 63
Query: 55 KLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLK---NINDA 111
K+ SL F + I D T ++ V+G L P F Q F+L ++ +
Sbjct: 64 KVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNK 123
Query: 112 WVCTNDMFRLALHNFG 127
+ NDMFR FG
Sbjct: 124 FYVHNDMFRYEDEVFG 139
>gi|45359849 Ras-GTPase activating protein SH3 domain-binding
protein 2 isoform a [Homo sapiens]
Length = 482
Score = 38.1 bits (87), Expect = 0.002
Identities = 36/136 (26%), Positives = 51/136 (37%), Gaps = 11/136 (8%)
Query: 3 DKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAA--------IVE 54
+KP +G F++ YY L + L Y S G GK I
Sbjct: 4 EKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHH 63
Query: 55 KLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLK---NINDA 111
K+ SL F + I D T ++ V+G L P F Q F+L ++ +
Sbjct: 64 KVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNK 123
Query: 112 WVCTNDMFRLALHNFG 127
+ NDMFR FG
Sbjct: 124 FYVHNDMFRYEDEVFG 139
>gi|45359846 Ras-GTPase activating protein SH3 domain-binding
protein 2 isoform b [Homo sapiens]
Length = 449
Score = 38.1 bits (87), Expect = 0.002
Identities = 36/136 (26%), Positives = 51/136 (37%), Gaps = 11/136 (8%)
Query: 3 DKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAA--------IVE 54
+KP +G F++ YY L + L Y S G GK I
Sbjct: 4 EKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHH 63
Query: 55 KLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLK---NINDA 111
K+ SL F + I D T ++ V+G L P F Q F+L ++ +
Sbjct: 64 KVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNK 123
Query: 112 WVCTNDMFRLALHNFG 127
+ NDMFR FG
Sbjct: 124 FYVHNDMFRYEDEVFG 139
>gi|5031703 Ras-GTPase-activating protein SH3-domain-binding protein
[Homo sapiens]
Length = 466
Score = 37.0 bits (84), Expect = 0.004
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 11/136 (8%)
Query: 3 DKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAA--------IVE 54
+KP +G F++ YY L + L Y S G GK A I
Sbjct: 4 EKPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHR 63
Query: 55 KLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLK---NINDA 111
K+ S F I D T + ++ V+G L + + F Q F+L ++ +
Sbjct: 64 KVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANK 123
Query: 112 WVCTNDMFRLALHNFG 127
+ ND+FR FG
Sbjct: 124 FYVHNDIFRYQDEVFG 139
>gi|38327552 Ras-GTPase-activating protein SH3-domain-binding
protein [Homo sapiens]
Length = 466
Score = 37.0 bits (84), Expect = 0.004
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 11/136 (8%)
Query: 3 DKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAA--------IVE 54
+KP +G F++ YY L + L Y S G GK A I
Sbjct: 4 EKPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHR 63
Query: 55 KLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLK---NINDA 111
K+ S F I D T + ++ V+G L + + F Q F+L ++ +
Sbjct: 64 KVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANK 123
Query: 112 WVCTNDMFRLALHNFG 127
+ ND+FR FG
Sbjct: 124 FYVHNDIFRYQDEVFG 139
>gi|4503143 cathepsin D preproprotein [Homo sapiens]
Length = 412
Score = 27.3 bits (59), Expect = 3.2
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 5 PIWEQIGSSFIQHYYQLFDNDRTQLG 30
P+W +G FI YY +FD D ++G
Sbjct: 381 PLWI-LGDVFIGRYYTVFDRDNNRVG 405
>gi|239787086 zinc finger protein 611 isoform b [Homo sapiens]
Length = 636
Score = 26.9 bits (58), Expect = 4.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 2 GDKPIWEQIGSSFIQHYYQL 21
G+KPI +Q+GSSF H +L
Sbjct: 79 GNKPIKDQLGSSFYSHLPEL 98
>gi|239787084 zinc finger protein 611 isoform a [Homo sapiens]
Length = 705
Score = 26.9 bits (58), Expect = 4.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 2 GDKPIWEQIGSSFIQHYYQL 21
G+KPI +Q+GSSF H +L
Sbjct: 148 GNKPIKDQLGSSFYSHLPEL 167
>gi|239787082 zinc finger protein 611 isoform a [Homo sapiens]
Length = 705
Score = 26.9 bits (58), Expect = 4.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 2 GDKPIWEQIGSSFIQHYYQL 21
G+KPI +Q+GSSF H +L
Sbjct: 148 GNKPIKDQLGSSFYSHLPEL 167
>gi|239787080 zinc finger protein 611 isoform a [Homo sapiens]
Length = 705
Score = 26.9 bits (58), Expect = 4.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 2 GDKPIWEQIGSSFIQHYYQL 21
G+KPI +Q+GSSF H +L
Sbjct: 148 GNKPIKDQLGSSFYSHLPEL 167
>gi|156766086 zinc finger protein 600 [Homo sapiens]
Length = 722
Score = 26.9 bits (58), Expect = 4.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 2 GDKPIWEQIGSSFIQHYYQL 21
G+KPI +Q+GSSF H +L
Sbjct: 79 GNKPIKDQLGSSFYSHLPEL 98
>gi|157167158 zinc finger protein 808 [Homo sapiens]
Length = 903
Score = 26.9 bits (58), Expect = 4.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 2 GDKPIWEQIGSSFIQHYYQL 21
G+KPI +Q+GSSF H +L
Sbjct: 148 GNKPIKDQLGSSFYSHLPEL 167
>gi|119220559 phosphoribosylaminoimidazole carboxylase,
phosphoribosylaminoimidazole succinocarboxamide
synthetase isoform 1 [Homo sapiens]
Length = 432
Score = 26.6 bits (57), Expect = 5.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 47 QGKAAIVEKLSSLPFQKIQHSITA 70
+GKAAI K++S FQ +Q ++T+
Sbjct: 51 EGKAAISNKITSCIFQLLQEAVTS 74
>gi|39777599 transglutaminase 2 isoform b [Homo sapiens]
Length = 548
Score = 26.2 bits (56), Expect = 7.2
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 11 GSSFIQHYYQLFDNDRTQLGAIYIDAS------CLTWEGQQFQGKAAIVEKL 56
GSSF+ ++ L N A+Y+D+ LT +G +QG A ++ +
Sbjct: 127 GSSFVLGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNI 178
>gi|39777597 transglutaminase 2 isoform a [Homo sapiens]
Length = 687
Score = 26.2 bits (56), Expect = 7.2
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 11 GSSFIQHYYQLFDNDRTQLGAIYIDAS------CLTWEGQQFQGKAAIVEKL 56
GSSF+ ++ L N A+Y+D+ LT +G +QG A ++ +
Sbjct: 127 GSSFVLGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNI 178
>gi|34452681 ring finger protein 10 [Homo sapiens]
Length = 811
Score = 26.2 bits (56), Expect = 7.2
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 14/84 (16%)
Query: 15 IQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQ 74
+ H L D +Q + + + +Q + + EK++ ++ + + H
Sbjct: 315 VDHPIHLGDEQHSQYSKLLLASK------EQVLHRVVLEEKVA------LEQQLAEEKH- 361
Query: 75 PTPDSCIISMVVGQLKADEDPIMG 98
TP+SC I + +LK E+ + G
Sbjct: 362 -TPESCFIEAAIQELKTREEALSG 384
>gi|210031219 zinc finger protein 845 [Homo sapiens]
Length = 970
Score = 26.2 bits (56), Expect = 7.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 2 GDKPIWEQIGSSFIQHYYQL 21
G+KPI +Q+GSSF H +L
Sbjct: 132 GNKPIKDQLGSSFHSHLPEL 151
>gi|72384363 zinc finger protein 321 [Homo sapiens]
Length = 164
Score = 26.2 bits (56), Expect = 7.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 2 GDKPIWEQIGSSFIQHYYQL 21
G+KPI +Q+GSSF H +L
Sbjct: 79 GNKPIKDQLGSSFHSHLPEL 98
>gi|108796666 zinc finger protein 813 [Homo sapiens]
Length = 617
Score = 26.2 bits (56), Expect = 7.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 2 GDKPIWEQIGSSFIQHYYQL 21
G+KPI +Q+GSSF H +L
Sbjct: 132 GNKPIKDQLGSSFHSHLPEL 151
>gi|116805332 musculin [Homo sapiens]
Length = 206
Score = 25.8 bits (55), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 9 QIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTW 41
++ SS+I H QL DR + G Y+ LTW
Sbjct: 150 RLASSYIAHLRQLLQEDRYENG--YVHPVNLTW 180
>gi|38202237 transcription factor 21 [Homo sapiens]
Length = 179
Score = 25.8 bits (55), Expect = 9.4
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 9 QIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTW 41
++ SS+I H Q+ ND+ + G YI LTW
Sbjct: 122 RLASSYIAHLRQILANDKYENG--YIHPVNLTW 152
>gi|38202239 transcription factor 21 [Homo sapiens]
Length = 179
Score = 25.8 bits (55), Expect = 9.4
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 9 QIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTW 41
++ SS+I H Q+ ND+ + G YI LTW
Sbjct: 122 RLASSYIAHLRQILANDKYENG--YIHPVNLTW 152
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,945,834
Number of Sequences: 37866
Number of extensions: 184360
Number of successful extensions: 321
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 297
Number of HSP's gapped (non-prelim): 28
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.