Guide to the Human Genome
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Name: ZNF813 Sequence: fasta or formatted (617aa) NCBI GI: 108796666
Description:

zinc finger protein 813

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         24           1
 C cysteine            6.2         38           1
 D aspartate           2.4         15           1
 E glutamate           7.5         46           2
 F phenylalanine       4.5         28           1
 G glycine             6.2         38           1
 H histidine           8.1         50           3
 I isoleucine          3.4         21           2
 K lysine             11.0         68           2
 L leucine             6.8         42           2
 M methionine          1.1          7           2
 N asparagine          6.2         38           2
 P proline             2.9         18           1
 Q glutamine           3.9         24           1
 R arginine            7.1         44           2
 S serine              6.6         41           2
 T threonine           6.2         38           1
 V valine              2.6         16           1
 W tryptophan          0.3          2           1
 Y tyrosine            3.1         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 813 
ZNF761                0.764   zinc finger protein 761 
ZNF845                0.741   zinc finger protein 845 
ZNF860                0.702   zinc finger protein 860 
LOC388559             0.697   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.697   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.697   PREDICTED: hypothetical protein LOC388559 
ZNF808                0.686   zinc finger protein 808 
ZNF816A               0.682   zinc finger protein 816A 
ZNF611                0.676   zinc finger protein 611 isoform a 
ZNF611                0.676   zinc finger protein 611 isoform a 
ZNF611                0.676   zinc finger protein 611 isoform a 
ZNF765                0.660   zinc finger protein 765 
ZNF578                0.660   zinc finger protein 578 
ZNF600                0.622   zinc finger protein 600 
ZNF28                 0.618   zinc finger protein 28 
ZNF468                0.614   zinc finger protein ZNF468 isoform 2 
ZNF611                0.610   zinc finger protein 611 isoform b 
ZNF665                0.565   zinc finger protein 665 
ZNF616                0.559   zinc finger protein 616 
ZNF160                0.555   zinc finger protein 160 
ZNF160                0.555   zinc finger protein 160 
ZNF160                0.555   zinc finger protein 160 
ZNF347                0.551   zinc finger protein 347 
ZNF836                0.550   zinc finger protein 836 
ZNF701                0.538   zinc finger protein 701 
ZNF468                0.533   zinc finger protein ZNF468 isoform 1 
ZNF841                0.525   zinc finger protein 841 
ZNF534                0.504   zinc finger protein 534 isoform 1 
ZNF534                0.502   zinc finger protein 534 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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