Guide to the Human Genome
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Name: LOC128322 Sequence: fasta or formatted (126aa) NCBI GI: 88952306
Description:

PREDICTED: similar to nuclear transport factor 2

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt prot [340aa] PREDICTED: similar to nuclear transport factor 2
alt prot [126aa] PREDICTED: similar to nuclear transport factor 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1          9           3
 C cysteine            2.4          3           1
 D aspartate           7.9         10           1
 E glutamate           3.2          4           1
 F phenylalanine       7.9         10           1
 G glycine             7.1          9           1
 H histidine           3.2          4           1
 I isoleucine          6.3          8           2
 K lysine              5.6          7           1
 L leucine             7.9         10           2
 M methionine          2.4          3           1
 N asparagine          5.6          7           1
 P proline             4.8          6           1
 Q glutamine           8.7         11           1
 R arginine            3.2          4           1
 S serine              5.6          7           2
 T threonine           2.4          3           1
 V valine              4.8          6           3
 W tryptophan          1.6          2           1
 Y tyrosine            2.4          3           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to nuclear transport factor 2 [Ho... 
LOC128322             0.992   PREDICTED: similar to nuclear transport factor 2 [H...
LOC128322             0.992   PREDICTED: similar to nuclear transport factor 2 [Ho...
NUTF2                 0.846   nuclear transport factor 2 
NXT1                  0.054   NTF2-like export factor 1 
NXT2                  0.054   nuclear transport factor 2-like export factor 2 [Hom...
G3BP2                 0.046   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.046   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.046   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP1                 0.033   Ras-GTPase-activating protein SH3-domain-binding prot...
G3BP1                 0.033   Ras-GTPase-activating protein SH3-domain-binding pro...
LOC100294344          0.008   PREDICTED: similar to mitogen-activated protein kin...
MAPK8IP1              0.008   mitogen-activated protein kinase 8 interacting protei...
LOC644253             0.008   PREDICTED: similar to mitogen-activated protein kin...
RNF10                 0.008   ring finger protein 10 
ZDHHC16               0.004   Abl-philin 2 isoform 1 
ZDHHC16               0.004   Abl-philin 2 isoform 1 
C12orf36              0.004   hypothetical protein LOC283422 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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