Guide to the Human Genome
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Name: NXT1 Sequence: fasta or formatted (140aa) NCBI GI: 7019471
Description:

NTF2-like export factor 1

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         11           2
 C cysteine            2.9          4           1
 D aspartate           5.7          8           1
 E glutamate           5.7          8           2
 F phenylalanine       7.1         10           2
 G glycine             3.6          5           1
 H histidine           0.7          1           1
 I isoleucine          2.9          4           1
 K lysine              3.6          5           1
 L leucine             5.7          8           2
 M methionine          2.9          4           1
 N asparagine          5.0          7           1
 P proline             2.9          4           1
 Q glutamine           6.4          9           1
 R arginine            5.0          7           3
 S serine             10.0         14           2
 T threonine           7.1         10           2
 V valine             10.0         14           2
 W tryptophan          2.1          3           1
 Y tyrosine            2.9          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NTF2-like export factor 1 
NXT2                  0.782   nuclear transport factor 2-like export factor 2 [Hom...
NUTF2                 0.092   nuclear transport factor 2 
G3BP2                 0.080   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.080   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.080   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP1                 0.061   Ras-GTPase-activating protein SH3-domain-binding prot...
G3BP1                 0.061   Ras-GTPase-activating protein SH3-domain-binding pro...
LOC128322             0.054   PREDICTED: similar to nuclear transport factor 2 [Ho...
LOC128322             0.050   PREDICTED: similar to nuclear transport factor 2 [H...
LOC128322             0.050   PREDICTED: similar to nuclear transport factor 2 [Ho...
IL1R1                 0.004   interleukin 1 receptor, type I precursor 
KDM3A                 0.004   jumonji domain containing 1A 
KDM3A                 0.004   jumonji domain containing 1A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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