Guide to the Human Genome
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Name: NUTF2 Sequence: fasta or formatted (127aa) NCBI GI: 5031985
Description:

nuclear transport factor 2

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3          8           2
 C cysteine            2.4          3           1
 D aspartate           7.9         10           1
 E glutamate           3.1          4           1
 F phenylalanine       6.3          8           1
 G glycine             6.3          8           1
 H histidine           3.9          5           1
 I isoleucine          9.4         12           2
 K lysine              4.7          6           1
 L leucine             7.9         10           2
 M methionine          3.9          5           1
 N asparagine          3.9          5           1
 P proline             3.9          5           1
 Q glutamine          10.2         13           2
 R arginine            1.6          2           1
 S serine              6.3          8           2
 T threonine           3.9          5           1
 V valine              3.1          4           2
 W tryptophan          2.4          3           1
 Y tyrosine            2.4          3           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear transport factor 2 
LOC128322             0.852   PREDICTED: similar to nuclear transport factor 2 [Ho...
LOC128322             0.840   PREDICTED: similar to nuclear transport factor 2 [Ho...
LOC128322             0.835   PREDICTED: similar to nuclear transport factor 2 [H...
NXT1                  0.099   NTF2-like export factor 1 
NXT2                  0.082   nuclear transport factor 2-like export factor 2 [Hom...
G3BP2                 0.053   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.053   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.053   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP1                 0.049   Ras-GTPase-activating protein SH3-domain-binding prot...
G3BP1                 0.049   Ras-GTPase-activating protein SH3-domain-binding pro...
CTSD                  0.008   cathepsin D preproprotein 
ZNF611                0.008   zinc finger protein 611 isoform b 
ZNF611                0.008   zinc finger protein 611 isoform a 
ZNF611                0.008   zinc finger protein 611 isoform a 
ZNF611                0.008   zinc finger protein 611 isoform a 
ZNF600                0.008   zinc finger protein 600 
ZNF808                0.008   zinc finger protein 808 
PAICS                 0.008   phosphoribosylaminoimidazole carboxylase, phosphori...
TGM2                  0.004   transglutaminase 2 isoform b 
TGM2                  0.004   transglutaminase 2 isoform a 
RNF10                 0.004   ring finger protein 10 
ZNF845                0.004   zinc finger protein 845 
ZNF321                0.004   zinc finger protein 321 
ZNF813                0.004   zinc finger protein 813 
MSC                   0.004   musculin 
TCF21                 0.004   transcription factor 21 
TCF21                 0.004   transcription factor 21 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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