Guide to the Human Genome
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Name: ZNF600 Sequence: fasta or formatted (722aa) NCBI GI: 156766086
Description:

zinc finger protein 600

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         24           1
 C cysteine            6.6         48           1
 D aspartate           2.8         20           1
 E glutamate           6.5         47           2
 F phenylalanine       3.6         26           1
 G glycine             6.4         46           2
 H histidine           8.7         63           2
 I isoleucine          4.3         31           2
 K lysine             12.3         89           2
 L leucine             5.7         41           2
 M methionine          0.6          4           2
 N asparagine          4.2         30           2
 P proline             3.3         24           1
 Q glutamine           4.4         32           2
 R arginine            5.4         39           2
 S serine              8.7         63           2
 T threonine           5.7         41           1
 V valine              3.2         23           1
 W tryptophan          0.3          2           1
 Y tyrosine            4.0         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 600 
ZNF611                0.771   zinc finger protein 611 isoform b 
ZNF611                0.771   zinc finger protein 611 isoform a 
ZNF611                0.771   zinc finger protein 611 isoform a 
ZNF611                0.771   zinc finger protein 611 isoform a 
ZNF808                0.730   zinc finger protein 808 
ZNF845                0.686   zinc finger protein 845 
ZNF761                0.589   zinc finger protein 761 
LOC388559             0.587   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.587   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.587   PREDICTED: hypothetical protein LOC388559 
ZNF813                0.524   zinc finger protein 813 
ZNF28                 0.523   zinc finger protein 28 
ZNF160                0.509   zinc finger protein 160 
ZNF160                0.509   zinc finger protein 160 
ZNF160                0.509   zinc finger protein 160 
ZNF347                0.504   zinc finger protein 347 
ZNF616                0.493   zinc finger protein 616 
ZNF816A               0.489   zinc finger protein 816A 
ZNF578                0.488   zinc finger protein 578 
ZNF836                0.484   zinc finger protein 836 
ZNF860                0.477   zinc finger protein 860 
ZNF841                0.465   zinc finger protein 841 
ZNF91                 0.452   zinc finger protein 91 
ZNF665                0.452   zinc finger protein 665 
ZNF208                0.446   zinc finger protein 208 
ZNF43                 0.431   zinc finger protein 43 
ZNF726                0.429   PREDICTED: zinc finger protein 726 
ZNF726                0.429   PREDICTED: zinc finger protein 726 
ZNF726                0.429   PREDICTED: zinc finger protein 726 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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