Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF611 Sequence: fasta or formatted (705aa) NCBI GI: 239787080
Description:

zinc finger protein 611 isoform a

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [705aa] zinc finger protein 611 isoform a
alt mRNA [705aa] zinc finger protein 611 isoform a
alt prot [636aa] zinc finger protein 611 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         26           2
 C cysteine            6.8         48           1
 D aspartate           3.3         23           1
 E glutamate           7.7         54           2
 F phenylalanine       3.7         26           1
 G glycine             5.7         40           2
 H histidine           7.7         54           2
 I isoleucine          4.4         31           1
 K lysine             10.8         76           2
 L leucine             6.4         45           2
 M methionine          1.0          7           2
 N asparagine          4.5         32           2
 P proline             3.3         23           1
 Q glutamine           4.5         32           2
 R arginine            6.1         43           2
 S serine              8.4         59           2
 T threonine           5.5         39           1
 V valine              2.8         20           1
 W tryptophan          0.4          3           1
 Y tyrosine            3.4         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 611 isoform a 
ZNF611                1.000   zinc finger protein 611 isoform a 
ZNF611                1.000   zinc finger protein 611 isoform a 
ZNF611                0.909   zinc finger protein 611 isoform b 
ZNF600                0.794   zinc finger protein 600 
ZNF808                0.788   zinc finger protein 808 
ZNF845                0.665   zinc finger protein 845 
ZNF761                0.636   zinc finger protein 761 
LOC388559             0.628   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.628   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.628   PREDICTED: hypothetical protein LOC388559 
ZNF813                0.588   zinc finger protein 813 
ZNF28                 0.575   zinc finger protein 28 
ZNF578                0.575   zinc finger protein 578 
ZNF860                0.553   zinc finger protein 860 
ZNF816A               0.537   zinc finger protein 816A 
ZNF665                0.494   zinc finger protein 665 
ZNF160                0.490   zinc finger protein 160 
ZNF160                0.490   zinc finger protein 160 
ZNF160                0.490   zinc finger protein 160 
ZNF468                0.485   zinc finger protein ZNF468 isoform 2 
ZNF836                0.484   zinc finger protein 836 
ZNF347                0.484   zinc finger protein 347 
ZNF765                0.481   zinc finger protein 765 
ZNF616                0.480   zinc finger protein 616 
ZNF841                0.455   zinc finger protein 841 
ZNF534                0.437   zinc finger protein 534 isoform 2 
ZNF534                0.437   zinc finger protein 534 isoform 1 
ZNF468                0.427   zinc finger protein ZNF468 isoform 1 
ZNF701                0.425   zinc finger protein 701 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press