Guide to the Human Genome
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Name: LOC128322 Sequence: fasta or formatted (340aa) NCBI GI: 169160905
Description:

PREDICTED: similar to nuclear transport factor 2

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt prot [126aa] PREDICTED: similar to nuclear transport factor 2
alt prot [126aa] PREDICTED: similar to nuclear transport factor 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         24           3
 C cysteine            2.6          9           1
 D aspartate           5.3         18           1
 E glutamate           2.9         10           1
 F phenylalanine       4.4         15           2
 G glycine            10.6         36           3
 H histidine           1.2          4           1
 I isoleucine          4.1         14           2
 K lysine              3.8         13           1
 L leucine             6.8         23           2
 M methionine          0.9          3           1
 N asparagine          3.2         11           1
 P proline             5.9         20           2
 Q glutamine           6.2         21           1
 R arginine            9.4         32           3
 S serine             12.1         41           2
 T threonine           2.9         10           1
 V valine              6.5         22           3
 W tryptophan          3.2         11           1
 Y tyrosine            0.9          3           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to nuclear transport factor 2 [H... 
LOC128322             0.352   PREDICTED: similar to nuclear transport factor 2 [Ho...
LOC128322             0.349   PREDICTED: similar to nuclear transport factor 2 [Ho...
NUTF2                 0.299   nuclear transport factor 2 
NXT1                  0.019   NTF2-like export factor 1 
NXT2                  0.019   nuclear transport factor 2-like export factor 2 [Hom...
G3BP2                 0.016   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.016   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.016   Ras-GTPase activating protein SH3 domain-binding pro...
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 
KIAA0323              0.012   hypothetical protein LOC23351 
G3BP1                 0.012   Ras-GTPase-activating protein SH3-domain-binding prot...
G3BP1                 0.012   Ras-GTPase-activating protein SH3-domain-binding pro...
LOC100293375          0.010   PREDICTED: hypothetical protein 
LOC100287499          0.010   PREDICTED: hypothetical protein 
LOC100287499          0.010   PREDICTED: hypothetical protein XP_002343643 
PPP1R13B              0.010   apoptosis-stimulating protein of p53, 1 
LOC100133915          0.009   PREDICTED: hypothetical protein 
KCNK3                 0.009   potassium channel, subfamily K, member 3 
CHST8                 0.009   carbohydrate (N-acetylgalactosamine 4-0) sulfotrans...
CHST8                 0.009   carbohydrate (N-acetylgalactosamine 4-0) sulfotrans...
CHST8                 0.009   carbohydrate (N-acetylgalactosamine 4-0) sulfotransf...
LILRB2                0.009   leukocyte immunoglobulin-like receptor, subfamily B...
LOC100131455          0.009   PREDICTED: hypothetical protein 
LOC100131455          0.009   PREDICTED: hypothetical protein 
LOC100131455          0.009   PREDICTED: hypothetical protein 
SRCAP                 0.009   Snf2-related CBP activator protein 
MBTD1                 0.009   mbt domain containing 1 
LOC643637             0.007   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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