Guide to the Human Genome
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Name: NXT2 Sequence: fasta or formatted (197aa) NCBI GI: 21361724
Description:

nuclear transport factor 2-like export factor 2

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         13           2
 C cysteine            1.5          3           1
 D aspartate           6.1         12           1
 E glutamate           5.1         10           2
 F phenylalanine       5.6         11           2
 G glycine             3.6          7           1
 H histidine           3.0          6           1
 I isoleucine          1.5          3           1
 K lysine              3.6          7           1
 L leucine             6.6         13           2
 M methionine          2.0          4           1
 N asparagine          6.1         12           2
 P proline             3.6          7           1
 Q glutamine           6.6         13           1
 R arginine            7.1         14           3
 S serine              9.1         18           3
 T threonine          10.2         20           2
 V valine              6.1         12           2
 W tryptophan          2.0          4           1
 Y tyrosine            4.1          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear transport factor 2-like export factor 2 [Hom... 
NXT1                  0.531   NTF2-like export factor 1 
NUTF2                 0.052   nuclear transport factor 2 
LOC128322             0.034   PREDICTED: similar to nuclear transport factor 2 [Ho...
LOC128322             0.034   PREDICTED: similar to nuclear transport factor 2 [H...
LOC128322             0.034   PREDICTED: similar to nuclear transport factor 2 [Ho...
G3BP2                 0.026   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.026   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.026   Ras-GTPase activating protein SH3 domain-binding pro...
NAE1                  0.013   NEDD8 activating enzyme E1 subunit 1 isoform b [Homo...
NAE1                  0.013   NEDD8 activating enzyme E1 subunit 1 isoform a 
LOC730060             0.010   PREDICTED: hypothetical protein 
LOC730060             0.010   PREDICTED: hypothetical protein 
LOC730060             0.010   PREDICTED: hypothetical protein 
CHRNA10               0.008   cholinergic receptor, nicotinic, alpha 10 
ZNF577                0.008   zinc finger protein 577 isoform b 
ZNF577                0.008   zinc finger protein 577 isoform a 
TAF1                  0.008   TBP-associated factor 1 isoform 2 
TAF1                  0.008   TBP-associated factor 1 isoform 1 
KIAA0226              0.008   hypothetical protein LOC9711 isoform 1 
KIAA0226              0.008   hypothetical protein LOC9711 isoform 2 
TAF1L                 0.008   TBP-associated factor RNA polymerase 1-like 
NBPF7                 0.005   hypothetical protein LOC343505 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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