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Search of human proteins with 50233787
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50233787 nuclear protein in testis [Homo sapiens]
(1132 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50233787 nuclear protein in testis [Homo sapiens] 2294 0.0
gi|148806874 hypothetical protein LOC54754 [Homo sapiens] 478 e-134
gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo sap... 470 e-132
gi|150170710 hypothetical protein LOC728118 [Homo sapiens] 469 e-132
gi|239744140 PREDICTED: hypothetical protein [Homo sapiens] 468 e-131
gi|113865921 hypothetical protein LOC441457 [Homo sapiens] 456 e-128
gi|57528101 hypothetical protein LOC728130 [Homo sapiens] 438 e-122
gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo sap... 436 e-122
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 52 4e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 51 7e-06
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 50 9e-06
gi|146134388 YLP motif containing 1 [Homo sapiens] 50 1e-05
gi|160707881 formin 2 [Homo sapiens] 49 3e-05
gi|55750053 atrophin-1 [Homo sapiens] 48 6e-05
gi|55750041 atrophin-1 [Homo sapiens] 48 6e-05
gi|47132519 Ras association and pleckstrin homology domains 1 is... 48 6e-05
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 48 6e-05
gi|55749779 DENN/MADD domain containing 1A isoform 1 [Homo sapiens] 48 6e-05
gi|110349719 titin isoform N2-A [Homo sapiens] 47 8e-05
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 47 8e-05
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 47 8e-05
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 47 8e-05
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 47 8e-05
gi|157168329 formin 1 [Homo sapiens] 47 1e-04
gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain ... 47 1e-04
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 47 1e-04
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 47 1e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 47 1e-04
gi|119829187 alpha 1 type XVII collagen [Homo sapiens] 47 1e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 46 2e-04
>gi|50233787 nuclear protein in testis [Homo sapiens]
Length = 1132
Score = 2294 bits (5944), Expect = 0.0
Identities = 1132/1132 (100%), Positives = 1132/1132 (100%)
Query: 1 MASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNP 60
MASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNP
Sbjct: 1 MASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNP 60
Query: 61 LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG
Sbjct: 61 LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
Query: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPLEKAWP 180
TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPLEKAWP
Sbjct: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPLEKAWP 180
Query: 181 GPHGTTGEGGPVATLSKPSLGDRSKISKDVYENFRQWQRYKALARRHLSQSPDTEALSCF 240
GPHGTTGEGGPVATLSKPSLGDRSKISKDVYENFRQWQRYKALARRHLSQSPDTEALSCF
Sbjct: 181 GPHGTTGEGGPVATLSKPSLGDRSKISKDVYENFRQWQRYKALARRHLSQSPDTEALSCF 240
Query: 241 LIPVLRSLARLKPTMTLEEGLPLAVQEWEHTSNFDRMIFYEMAERFMEFEAEEMQIQNTQ 300
LIPVLRSLARLKPTMTLEEGLPLAVQEWEHTSNFDRMIFYEMAERFMEFEAEEMQIQNTQ
Sbjct: 241 LIPVLRSLARLKPTMTLEEGLPLAVQEWEHTSNFDRMIFYEMAERFMEFEAEEMQIQNTQ 300
Query: 301 LMNGSQGLSPATPLKLDPLGPLASEVCQQPVYIPKKAASKTRAPRRRQRKAQRPPAPEAP 360
LMNGSQGLSPATPLKLDPLGPLASEVCQQPVYIPKKAASKTRAPRRRQRKAQRPPAPEAP
Sbjct: 301 LMNGSQGLSPATPLKLDPLGPLASEVCQQPVYIPKKAASKTRAPRRRQRKAQRPPAPEAP 360
Query: 361 KEIPPEAVKEYVDIMEWLVGTHLATGESDGKQEEEGQQQEEEGMYPDPGLLSYINELCSQ 420
KEIPPEAVKEYVDIMEWLVGTHLATGESDGKQEEEGQQQEEEGMYPDPGLLSYINELCSQ
Sbjct: 361 KEIPPEAVKEYVDIMEWLVGTHLATGESDGKQEEEGQQQEEEGMYPDPGLLSYINELCSQ 420
Query: 421 KVFVSKVEAVIHPQFLADLLSPEKQRDPLALIEELEQEEGLTLAQLVQKRLMALEEEEDA 480
KVFVSKVEAVIHPQFLADLLSPEKQRDPLALIEELEQEEGLTLAQLVQKRLMALEEEEDA
Sbjct: 421 KVFVSKVEAVIHPQFLADLLSPEKQRDPLALIEELEQEEGLTLAQLVQKRLMALEEEEDA 480
Query: 481 EAPPSFSGAQLDSSPSGSVEDEDGDGRLRPSPGLQGAGGAACLGKVSSSGKRAREVHGGQ 540
EAPPSFSGAQLDSSPSGSVEDEDGDGRLRPSPGLQGAGGAACLGKVSSSGKRAREVHGGQ
Sbjct: 481 EAPPSFSGAQLDSSPSGSVEDEDGDGRLRPSPGLQGAGGAACLGKVSSSGKRAREVHGGQ 540
Query: 541 EQALDSPRGMHRDGNTLPSPSSWDLQPELAAPQGTPGPLGVERRGSGKVINQVSLHQDGH 600
EQALDSPRGMHRDGNTLPSPSSWDLQPELAAPQGTPGPLGVERRGSGKVINQVSLHQDGH
Sbjct: 541 EQALDSPRGMHRDGNTLPSPSSWDLQPELAAPQGTPGPLGVERRGSGKVINQVSLHQDGH 600
Query: 601 LGGAGPPGHCLVADRTSEALPLCWQGGFQPESTPSLDAGLAELAPLQGQGLEKQVLGLQK 660
LGGAGPPGHCLVADRTSEALPLCWQGGFQPESTPSLDAGLAELAPLQGQGLEKQVLGLQK
Sbjct: 601 LGGAGPPGHCLVADRTSEALPLCWQGGFQPESTPSLDAGLAELAPLQGQGLEKQVLGLQK 660
Query: 661 GQQTGGRGVLPQGKEPLAVPWEGSSGAMWGDDRGTPMAQSYDQNPSPRAAGERDDVCLSP 720
GQQTGGRGVLPQGKEPLAVPWEGSSGAMWGDDRGTPMAQSYDQNPSPRAAGERDDVCLSP
Sbjct: 661 GQQTGGRGVLPQGKEPLAVPWEGSSGAMWGDDRGTPMAQSYDQNPSPRAAGERDDVCLSP 720
Query: 721 GVWLSSEMDAVGLELPVQIEEVIESFQVEKCVTEYQEGCQGLGSRGNISLGPGETLVPGD 780
GVWLSSEMDAVGLELPVQIEEVIESFQVEKCVTEYQEGCQGLGSRGNISLGPGETLVPGD
Sbjct: 721 GVWLSSEMDAVGLELPVQIEEVIESFQVEKCVTEYQEGCQGLGSRGNISLGPGETLVPGD 780
Query: 781 TESSVIPCGGTVAAAALEKRNYCSLPGPLRANSPPLRSKENQEQSCETVGHPSDLWAEGC 840
TESSVIPCGGTVAAAALEKRNYCSLPGPLRANSPPLRSKENQEQSCETVGHPSDLWAEGC
Sbjct: 781 TESSVIPCGGTVAAAALEKRNYCSLPGPLRANSPPLRSKENQEQSCETVGHPSDLWAEGC 840
Query: 841 FPLLESGDSTLGSSKETLPPTCQGNLLIMGTEDASSLPEASQEAGSRGNSFSPLLETIEP 900
FPLLESGDSTLGSSKETLPPTCQGNLLIMGTEDASSLPEASQEAGSRGNSFSPLLETIEP
Sbjct: 841 FPLLESGDSTLGSSKETLPPTCQGNLLIMGTEDASSLPEASQEAGSRGNSFSPLLETIEP 900
Query: 901 VNILDVKDDCGLQLRVSEDTCPLNVHSYDPQGEGRVDPDLSKPKNLAPLQESQESYTTGT 960
VNILDVKDDCGLQLRVSEDTCPLNVHSYDPQGEGRVDPDLSKPKNLAPLQESQESYTTGT
Sbjct: 901 VNILDVKDDCGLQLRVSEDTCPLNVHSYDPQGEGRVDPDLSKPKNLAPLQESQESYTTGT 960
Query: 961 PKATSSHQGLGSTLPRRGTRNAIVPRETSVSKTHRSADRAKGKEKKKKEAEEEDEELSNF 1020
PKATSSHQGLGSTLPRRGTRNAIVPRETSVSKTHRSADRAKGKEKKKKEAEEEDEELSNF
Sbjct: 961 PKATSSHQGLGSTLPRRGTRNAIVPRETSVSKTHRSADRAKGKEKKKKEAEEEDEELSNF 1020
Query: 1021 AYLLASKLSLSPREHPLSPHHASGGQGSQRASHLLPAGAKGPSKLPYPVAKSGKRALAGG 1080
AYLLASKLSLSPREHPLSPHHASGGQGSQRASHLLPAGAKGPSKLPYPVAKSGKRALAGG
Sbjct: 1021 AYLLASKLSLSPREHPLSPHHASGGQGSQRASHLLPAGAKGPSKLPYPVAKSGKRALAGG 1080
Query: 1081 PAPTEKTPHSGAQLGVPREKPLALGVVRPSQPRKRRCDSFVTGRRKKRRRSQ 1132
PAPTEKTPHSGAQLGVPREKPLALGVVRPSQPRKRRCDSFVTGRRKKRRRSQ
Sbjct: 1081 PAPTEKTPHSGAQLGVPREKPLALGVVRPSQPRKRRCDSFVTGRRKKRRRSQ 1132
>gi|148806874 hypothetical protein LOC54754 [Homo sapiens]
Length = 756
Score = 478 bits (1231), Expect = e-134
Identities = 283/534 (52%), Positives = 344/534 (64%), Gaps = 46/534 (8%)
Query: 1 MASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNP 60
MAS+GA + GP +++ P +LS ALPF P P PP ++ +V P P
Sbjct: 1 MASNGAYPVLGPGVTVNPGTSLSVFTALPFATPAPGPAHRPP-------LVTAVVPPAGP 53
Query: 61 LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
L+LSAFPS+ LV G G SGAGA V V+++TE G +P Q Q ILTQ L APG
Sbjct: 54 LVLSAFPSTPLVAGQDGRGPSGAGASNVFVQMRTEVGPVKPPQAQTLILTQAPLVWQAPG 113
Query: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQ--EG--PPGLPPQPPPPVAQLVPIVPLE 176
T CGG+ P P + A+ + ++ VG +Q EG GLP PPPP AQ+ PIV
Sbjct: 114 TLCGGVMCPPPLLLAAAPGVPVTSAQVVGGTQACEGGWSHGLPLPPPPPAAQVAPIVSPG 173
Query: 177 KAWPGPHGTTGEGGPVATLSKPSLGDRSKISKDVYENFRQWQRYKALARRHLSQSPDTEA 236
A P P G GEG + +K D K K VYENFR WQ YK LARRHL QSPDTEA
Sbjct: 174 NARPWPQGAHGEGSLAPSQAKARPDDSCK-PKSVYENFRLWQHYKPLARRHLPQSPDTEA 232
Query: 237 LSCFLIPVLRSLARLKPTMTLEEGLPLAVQEWEHTSNFDRMIFYEMAERFMEFEA-EEMQ 295
LSCFLIPVLRSLAR KPTMTLEEGL A++EW+HTSNFDRMIFYEMAE+F+EFEA EEMQ
Sbjct: 233 LSCFLIPVLRSLARRKPTMTLEEGLWQAMREWQHTSNFDRMIFYEMAEKFLEFEAEEEMQ 292
Query: 296 IQNTQLMNGSQGLSPATPLKLDPLGPLASEVCQQPVYIPKKAASK--------------- 340
IQ +Q M G Q L P P +L+P GP A EV +QPVY+P K K
Sbjct: 293 IQKSQWMKGPQSLPPPAPPRLEPRGPPAPEVVKQPVYLPSKDGPKAPTACLPPPRPQRPA 352
Query: 341 -TRA---PRRRQRKA-----------QRPPAPEAPKEIPPEAVKEYVDIMEWLVGTHLA- 384
T+A P R QR A QRP + P+EIPPE V+EYVDIME L+G+H
Sbjct: 353 ETKAHLPPPRPQRPAETNAHLPPPRPQRPAETKVPEEIPPEVVQEYVDIMEELLGSHPGD 412
Query: 385 TGESDGKQE--EEGQQQEEEGMYPDPGLLSYINELCSQKVFVSKVEAVIHPQFLADLLSP 442
TGE +G++E + Q QEE+G+ DPGLLSYI++LCSQ+ FV+KVEAVIHP+FL +LLSP
Sbjct: 413 TGEPEGQREKGKVEQPQEEDGITSDPGLLSYIDKLCSQEDFVTKVEAVIHPRFLEELLSP 472
Query: 443 EKQRDPLALIEELEQEEGLTLAQLVQKRLMALEEEEDAEAPPSFSGAQLDSSPS 496
+ Q D LAL +ELEQEEGLTLAQLV+KRL++L+E+ A P A+LDSSPS
Sbjct: 473 DPQMDFLALSQELEQEEGLTLAQLVEKRLLSLKEKGCGRAAPRHGTARLDSSPS 526
Score = 115 bits (288), Expect = 2e-25
Identities = 82/226 (36%), Positives = 114/226 (50%), Gaps = 17/226 (7%)
Query: 913 QLRVSEDTCPLNVHSYDPQGEGRVDPDLSKPKNLAPLQESQESYTTGTPKATSSHQGLGS 972
Q RVS +T P + DPQG+GRV +++ ++ A L Q+S + TS Q
Sbjct: 542 QQRVSVETSPPQTAAQDPQGQGRVRTGMARSEDPAVLLGCQDSPRLKAVRPTSPPQDHRP 601
Query: 973 TLPRRGTRNAI-VPRETSVSKTHRSADRAKGKEKKKKEAEEEDEELSNFAYLLASKLSLS 1031
T P GT++A+ +P E+ V ++H A + E+ EL Y++ S L
Sbjct: 602 TCPGLGTKDALGLPGESPVKESHGLA-----------KGSSEETELPGMVYVVGSHHRLR 650
Query: 1032 PREHPLSPHHASG-----GQGSQRASHLLPAGAKGPSKLPYPVAKSGKRALAGGPAPTEK 1086
P SP +SG G+G Q A A +G S P P +KS KR L G P+P EK
Sbjct: 651 PWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPSPASKSKKRPLFGSPSPAEK 710
Query: 1087 TPHSGAQLGVPREKPLALGVVRPSQPRKRRCDSFVTGRRKKRRRSQ 1132
TPH G L V E+ LA G+ PSQ +KR+ D + R+KKR SQ
Sbjct: 711 TPHPGPGLRVSGEQSLAWGLGGPSQSQKRKGDPLASRRKKKRHCSQ 756
>gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 878
Score = 470 bits (1210), Expect = e-132
Identities = 295/586 (50%), Positives = 357/586 (60%), Gaps = 51/586 (8%)
Query: 1 MASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNP 60
MAS+GA + GP ++ P +LS ALPF P P P P P P
Sbjct: 123 MASNGAYPVLGPGVTANPGTSLSVFTALPFTTPAPGPAHGPLLVTAGAP-------PGGP 175
Query: 61 LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
L+LS FPS+ LVT G SGAGA V V+++TE G + +Q Q +LTQ L APG
Sbjct: 176 LVLSTFPSTPLVTEQDGCGPSGAGASNVFVQMRTEVGPVKAAQAQTLVLTQAPLVWQAPG 235
Query: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQ--EG--PPGLP-PQPPPPVAQLVPIVPL 175
CGG+ P P + A+ V ++ ++ VG +Q EG GLP P PPPP AQL PIV
Sbjct: 236 ALCGGVVCPPPLLLAAAPVVPVMAAQVVGGTQACEGGWSQGLPLPPPPPPAAQLPPIVSQ 295
Query: 176 EKAWPGPHGTTGEGGPVATLSKPSLGDRSKISKDVYENFRQWQRYKALARRHLSQSPDTE 235
A P P G GE ++ +K D + VYENFR WQ YK LARRHL QSPDTE
Sbjct: 296 GNAGPWPQGAHGESSLASSQAKAPPDDSCN-PRSVYENFRLWQHYKPLARRHLPQSPDTE 354
Query: 236 ALSCFLIPVLRSLARLKPTMTLEEGLPLAVQEWEHTSNFDRMIFYEMAERFMEFEA-EEM 294
ALSCFLIPVLRSLAR KPTMTLEEGL A++EW+HTSNFDRMIFYEMAE+F+EFEA EEM
Sbjct: 355 ALSCFLIPVLRSLARRKPTMTLEEGLWRAMREWQHTSNFDRMIFYEMAEKFLEFEAEEEM 414
Query: 295 QIQNTQLMNGSQGLSPATPLKLDPLGPLASEVCQQPVYIPKKAASKT------------- 341
QIQ +Q M G Q L P +L+P GP A EV +QPVY+P KA K
Sbjct: 415 QIQKSQWMKGPQCLPPPATPRLEPRGPPAPEVVKQPVYLPSKAGPKAPTACLPPPRPQRP 474
Query: 342 -----RAPRRRQRKA-----------QRPPAPEAPKEIPPEAVKEYVDIMEWLVGTHL-A 384
R P R R+A QRP + P+EIPPE V+EYVDIME L+G L A
Sbjct: 475 VTKARRPPPRPHRRAETKARLPPPRPQRPAETKVPEEIPPEVVQEYVDIMEELLGPSLGA 534
Query: 385 TGESDGKQEEEG---QQQEEEGMYPDPGLLSYINELCSQKVFVSKVEAVIHPQFLADLLS 441
TGE + KQ EEG Q QEE+ PDPGLLSYI++LCSQK FV+KVEAVIHPQFL +LLS
Sbjct: 535 TGEPE-KQREEGKVKQPQEEDWTPPDPGLLSYIDKLCSQKDFVTKVEAVIHPQFLEELLS 593
Query: 442 PEKQRDPLALIEELEQEEGLTLAQLVQKRLMALEEEEDAEAPPSFSGAQLDSSPSGSVED 501
P+ Q D LAL ++LEQEEGLTLAQLV+KRL L+E++ A A PS A+LDSS S
Sbjct: 594 PDPQMDFLALSQDLEQEEGLTLAQLVEKRLPPLKEKQHARAAPSRGTARLDSSSSKFAAG 653
Query: 502 EDGDGRLRPSPGLQGAGGAACLGKVSSSGKRAR-EVHGGQEQALDS 546
+ G R P P QG G C ++++ + R H G ++ DS
Sbjct: 654 Q-GAERDVPDP-QQGVGMETCPPQMTARDSQGRGRAHTGMARSEDS 697
Score = 94.7 bits (234), Expect = 4e-19
Identities = 74/226 (32%), Positives = 110/226 (48%), Gaps = 17/226 (7%)
Query: 913 QLRVSEDTCPLNVHSYDPQGEGRVDPDLSKPKNLAPLQESQESYTTGTPKATSSHQGLGS 972
Q V +TCP + + D QG GR +++ ++ L Q+S TS Q
Sbjct: 664 QQGVGMETCPPQMTARDSQGRGRAHTGMARSEDSVVLLGCQDSPGLRAAWPTSPPQDHRP 723
Query: 973 TLPRRGTRNAI-VPRETSVSKTHRSADRAKGKEKKKKEAEEEDEELSNFAYLLASKLSLS 1031
T P GT++A+ +P + V ++H A + E+EEL + A+LL S+ L
Sbjct: 724 TCPGVGTKDALDLPGGSPVRESHGLA-----------QGSSEEEELPSLAFLLGSQHKLL 772
Query: 1032 PREHPLSPHHASGGQGSQR----ASHLLP-AGAKGPSKLPYPVAKSGKRALAGGPAPTEK 1086
P P SP ASG ++ +H P A +G + P P K+ KR L G +P EK
Sbjct: 773 PWWLPQSPVPASGLLSPEKWGPQGTHQSPSAERRGLNLAPSPANKAKKRPLFGSLSPAEK 832
Query: 1087 TPHSGAQLGVPREKPLALGVVRPSQPRKRRCDSFVTGRRKKRRRSQ 1132
TP+ G L V E+ L G+ PSQ +KR+ D V+ + KK+ SQ
Sbjct: 833 TPYPGPGLRVSGEQSLTWGLGGPSQSQKRKGDPLVSRKEKKQHCSQ 878
>gi|150170710 hypothetical protein LOC728118 [Homo sapiens]
Length = 878
Score = 469 bits (1208), Expect = e-132
Identities = 295/587 (50%), Positives = 355/587 (60%), Gaps = 53/587 (9%)
Query: 1 MASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNP 60
MAS+GA GP ++ P +LS ALPF P P P P P P
Sbjct: 123 MASNGAYPALGPGVTANPGTSLSVFTALPFTTPAPGPAHGPLLVTAGAP-------PGGP 175
Query: 61 LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
L+LS PS+ LVT G SGAGA V V+++TE G + +Q Q +LTQ L APG
Sbjct: 176 LVLSTLPSTPLVTEQDGCGPSGAGASNVFVQMRTEVGPVKAAQAQTLVLTQAPLVWQAPG 235
Query: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQ--EG--PPGLP-PQPPPPVAQLVPIVPL 175
CGG+ P P + A+ V ++ ++ VG +Q EG GLP P PPPP AQL PIV
Sbjct: 236 ALCGGVVCPPPLLLAAAPVVPVMAAQVVGGTQACEGGWSQGLPLPPPPPPAAQLPPIVSQ 295
Query: 176 EKAWPGPHGTTGEGGPVATLSKPSLGDRSKISKDVYENFRQWQRYKALARRHLSQSPDTE 235
A P P G GEG ++ +K D + VYENFR WQ YK LARRHL QSPDTE
Sbjct: 296 GNAGPWPQGAHGEGSLASSQAKAPPDDSCN-PRSVYENFRLWQHYKPLARRHLPQSPDTE 354
Query: 236 ALSCFLIPVLRSLARLKPTMTLEEGLPLAVQEWEHTSNFDRMIFYEMAERFMEFEA-EEM 294
ALSCFLIPVLRSLAR KPTMTLEEGL A++EW+HTSNFDRMIFYEMAE+F+EFEA EEM
Sbjct: 355 ALSCFLIPVLRSLARRKPTMTLEEGLWRAMREWQHTSNFDRMIFYEMAEKFLEFEAEEEM 414
Query: 295 QIQNTQLMNGSQGLSPATPLKLDPLGPLASEVCQQPVYIPKKAASKT------------- 341
QIQ +Q M G Q L P +L+P GP A EV +QPVY+P KA K
Sbjct: 415 QIQKSQWMKGPQCLPPPATPRLEPRGPPAPEVVKQPVYLPSKAGPKAPTACLPPPRPQRP 474
Query: 342 -----RAPRRRQRKA-----------QRPPAPEAPKEIPPEAVKEYVDIMEWLVGTHL-A 384
R P R R+A QRP + P+EIPPE V+EYVDIME L+G L A
Sbjct: 475 VTKARRPPPRPHRRAETKARLPPPRPQRPAETKVPEEIPPEVVQEYVDIMEELLGPSLGA 534
Query: 385 TGESDGKQEEEG---QQQEEEGMYPDPGLLSYINELCSQKVFVSKVEAVIHPQFLADLLS 441
TGE + KQ EEG Q QEE+ PDPGLLSY ++LCSQK FV+KVEAVIHPQFL +LLS
Sbjct: 535 TGEPE-KQREEGEVKQPQEEDWTPPDPGLLSYTDKLCSQKDFVTKVEAVIHPQFLEELLS 593
Query: 442 PEKQRDPLALIEELEQEEGLTLAQLVQKRLMALEEEEDAEAPPSFSGAQLDSSPSGSVED 501
P+ Q D LAL +ELEQEEGLTLAQLV+KRL+ L+E++ A A PS A+LDSS S +
Sbjct: 594 PDPQMDFLALSQELEQEEGLTLAQLVEKRLLPLKEKQHARAAPSRGTARLDSSSS---KF 650
Query: 502 EDGDGRLRPSP-GLQGAGGAACLGKVSSSGKRAR-EVHGGQEQALDS 546
G G R P QG G C + ++ + R H G ++ DS
Sbjct: 651 AAGQGAERDVPVPQQGVGMETCPPQTTARDSQGRGRAHTGMARSKDS 697
Score = 102 bits (255), Expect = 2e-21
Identities = 77/226 (34%), Positives = 111/226 (49%), Gaps = 17/226 (7%)
Query: 913 QLRVSEDTCPLNVHSYDPQGEGRVDPDLSKPKNLAPLQESQESYTTGTPKATSSHQGLGS 972
Q V +TCP + D QG GR +++ K+ L Q+S + TS Q
Sbjct: 664 QQGVGMETCPPQTTARDSQGRGRAHTGMARSKDSVVLLGCQDSPGLRAARPTSPPQDHRP 723
Query: 973 TLPRRGTRNAI-VPRETSVSKTHRSADRAKGKEKKKKEAEEEDEELSNFAYLLASKLSLS 1031
T P GT++A+ +P + V ++H A + E+EEL + A+LL S+ L
Sbjct: 724 TCPGVGTKDALDLPGGSPVRESHGLA-----------QGSSEEEELPSLAFLLGSQHKLL 772
Query: 1032 PREHPLSPHHASGGQGSQR----ASHLLP-AGAKGPSKLPYPVAKSGKRALAGGPAPTEK 1086
P P SP ASG ++ +H P A +G + P P K+ KR L G +P EK
Sbjct: 773 PWWLPQSPVPASGLLSPEKWGPQGTHQFPSAERRGLNLAPSPANKAKKRPLFGSLSPAEK 832
Query: 1087 TPHSGAQLGVPREKPLALGVVRPSQPRKRRCDSFVTGRRKKRRRSQ 1132
TPH G L V E+ L G+ PSQ +KR+ D V+ + KK+R SQ
Sbjct: 833 TPHPGPGLRVSGEQSLTWGLGGPSQSQKRKGDPLVSRKEKKQRCSQ 878
>gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]
Length = 878
Score = 468 bits (1205), Expect = e-131
Identities = 293/587 (49%), Positives = 357/587 (60%), Gaps = 53/587 (9%)
Query: 1 MASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNP 60
MAS+GA + GP ++ P +LS ALPF P P P P P P
Sbjct: 123 MASNGAYPVLGPGVTANPGTSLSVFTALPFTTPAPGPAHGPLLVTAGAP-------PGGP 175
Query: 61 LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
L+LS FPS+ LVT G SGAGA V V+++TE G + +Q Q +LTQ L APG
Sbjct: 176 LVLSTFPSTPLVTEQDGCSPSGAGASNVFVQMRTEVGPVKAAQAQTLVLTQAPLVWQAPG 235
Query: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQ--EG--PPGLP-PQPPPPVAQLVPIVPL 175
CGG+ P P + A+ V ++ ++ VG +Q EG GLP P PPPP AQL PIV
Sbjct: 236 ALCGGVVCPPPLLLAAAPVVPVMAAQVVGGTQACEGGWSQGLPLPPPPPPAAQLPPIVSQ 295
Query: 176 EKAWPGPHGTTGEGGPVATLSKPSLGDRSKISKDVYENFRQWQRYKALARRHLSQSPDTE 235
A P P G GE ++ +K D + VYENFR WQ YK LARRHL QSPDTE
Sbjct: 296 GNAGPWPQGAHGESSLASSQAKAPPDDSCN-PRSVYENFRLWQHYKPLARRHLPQSPDTE 354
Query: 236 ALSCFLIPVLRSLARLKPTMTLEEGLPLAVQEWEHTSNFDRMIFYEMAERFMEFEA-EEM 294
ALSCFLIPVLRSLAR KPTMTLEEGL A++EW+HTSNFDRMIFYEMAE+F+EFEA EEM
Sbjct: 355 ALSCFLIPVLRSLARRKPTMTLEEGLWRAMREWQHTSNFDRMIFYEMAEKFLEFEAEEEM 414
Query: 295 QIQNTQLMNGSQGLSPATPLKLDPLGPLASEVCQQPVYIPKKAASKTRA-------PRRR 347
QIQ +Q M G Q L P +L+P GP A EV +QPVY+P KA K + P+R
Sbjct: 415 QIQKSQWMKGPQCLPPPATPRLEPRGPPAPEVVKQPVYLPSKAGPKAQTACLPPPRPQRP 474
Query: 348 QRKAQRPP----------------------APEAPKEIPPEAVKEYVDIMEWLVGTHL-A 384
KA+RPP + P+EIPPE V+EYVDIME L+G L A
Sbjct: 475 VTKARRPPPQPHRRAETKARLPPPRPQRPAETKVPEEIPPEVVQEYVDIMEELLGPSLGA 534
Query: 385 TGESDGKQEEEG---QQQEEEGMYPDPGLLSYINELCSQKVFVSKVEAVIHPQFLADLLS 441
TGE + KQ EEG Q QEE+ PDPGLLSYI++LCSQK FV+KVEAVIHPQFL +LLS
Sbjct: 535 TGEPE-KQREEGKVKQPQEEDWTPPDPGLLSYIDKLCSQKDFVTKVEAVIHPQFLEELLS 593
Query: 442 PEKQRDPLALIEELEQEEGLTLAQLVQKRLMALEEEEDAEAPPSFSGAQLDSSPSGSVED 501
P+ Q D LAL ++LEQEEGLTLAQLV+KRL L+E++ + A PS A+LDSS S +
Sbjct: 594 PDPQMDFLALSQDLEQEEGLTLAQLVEKRLPPLKEKQHSRAAPSRGTARLDSSSS---KF 650
Query: 502 EDGDGRLRPSPGLQ-GAGGAACLGKVSSSGKRAR-EVHGGQEQALDS 546
G G R P Q G G C + ++ + R H G ++ DS
Sbjct: 651 AAGQGAERDVPDPQEGVGMETCPPQTTARDSQGRGRAHTGMARSEDS 697
Score = 96.7 bits (239), Expect = 1e-19
Identities = 73/223 (32%), Positives = 109/223 (48%), Gaps = 17/223 (7%)
Query: 916 VSEDTCPLNVHSYDPQGEGRVDPDLSKPKNLAPLQESQESYTTGTPKATSSHQGLGSTLP 975
V +TCP + D QG GR +++ ++ L Q+S + TS Q T P
Sbjct: 667 VGMETCPPQTTARDSQGRGRAHTGMARSEDSVVLLGCQDSPGLRAARPTSPPQDHRPTCP 726
Query: 976 RRGTRNAI-VPRETSVSKTHRSADRAKGKEKKKKEAEEEDEELSNFAYLLASKLSLSPRE 1034
GT++A+ +P + V ++H A + E+EEL + A+LL S+ L P
Sbjct: 727 GVGTKDALDLPGGSPVRESHGLA-----------QGSSEEEELPSLAFLLGSQHKLLPWW 775
Query: 1035 HPLSPHHASGGQGSQR----ASHLLP-AGAKGPSKLPYPVAKSGKRALAGGPAPTEKTPH 1089
P SP ASG ++ +H P A +G + P P K+ K+ L G +P EKTPH
Sbjct: 776 LPQSPVPASGLLSPEKWGPQGTHQSPSAERRGLNLAPSPANKAKKQPLFGSLSPAEKTPH 835
Query: 1090 SGAQLGVPREKPLALGVVRPSQPRKRRCDSFVTGRRKKRRRSQ 1132
G L V E+ L G+ PSQ +KR+ D V+ + KK+ SQ
Sbjct: 836 RGPGLRVSGEQSLTWGLGGPSQSQKRKGDPLVSRKEKKQHCSQ 878
>gi|113865921 hypothetical protein LOC441457 [Homo sapiens]
Length = 492
Score = 456 bits (1173), Expect = e-128
Identities = 266/488 (54%), Positives = 321/488 (65%), Gaps = 31/488 (6%)
Query: 1 MASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNP 60
MAS+GA + GP +++ P +LS ALPF P+ P PP ++ +V P P
Sbjct: 1 MASNGAYPVLGPGVTVNPGTSLSVFTALPFATPSPGPTHRPP-------LVTAVVPPAGP 53
Query: 61 LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
L+LSAFPS+ LV G G SGAGA V V+++TE G +P Q Q ILTQ L APG
Sbjct: 54 LVLSAFPSTPLVAGQDGRGPSGAGASNVFVQMRTEVGPVKPPQAQTLILTQAPLVWQAPG 113
Query: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQ--EG--PPGLPPQPPPPVAQLVPIVPLE 176
T CGG+ P P + A+ + ++ VG +Q EG GLP PPPP AQ+ PIV
Sbjct: 114 TLCGGVMCPPPLLLAAAPGVPVTSAQVVGGTQACEGGWSHGLPLPPPPPAAQVAPIVSPG 173
Query: 177 KAWPGPHGTTGEGGPVATLSKPSLGDRSKISKDVYENFRQWQRYKALARRHLSQSPDTEA 236
A P P G GEG + +K D K K VYENFR WQ YK LARRHL QSPDTEA
Sbjct: 174 NAGPWPQGAHGEGSLAPSQAKARPDDSCK-PKSVYENFRLWQHYKPLARRHLPQSPDTEA 232
Query: 237 LSCFLIPVLRSLARLKPTMTLEEGLPLAVQEWEHTSNFDRMIFYEMAERFMEFEA-EEMQ 295
LSCFLIPVLRSLAR KPTMTLEEGL A++EW+HTSNFDRMIFYEMA +F+EFEA EEMQ
Sbjct: 233 LSCFLIPVLRSLARRKPTMTLEEGLWRAMREWQHTSNFDRMIFYEMAAKFLEFEAEEEMQ 292
Query: 296 IQNTQLMNGSQGLSPATPLKLDPLGPLASEVCQQPVYIPKKAASKTRA----PRRRQRKA 351
IQ +Q M G Q L P P +L+P GP A EV +QPVY+P K K P R QR A
Sbjct: 293 IQKSQWMKGPQSLPPPAPPRLEPRGPPAPEVVKQPVYLPSKDGPKAPTACLPPPRPQRPA 352
Query: 352 Q--------RPPAP---EAPKEIPPEAVKEYVDIMEWLVGTHLA-TGESDGKQE--EEGQ 397
+ RPP P + P+EIPPE V+EYVDIME L+G+H TGE +G++E + Q
Sbjct: 353 ETKAHLPPPRPPRPAETKVPEEIPPEVVQEYVDIMEELLGSHPGDTGEPEGQREKGKVEQ 412
Query: 398 QQEEEGMYPDPGLLSYINELCSQKVFVSKVEAVIHPQFLADLLSPEKQRDPLALIEELEQ 457
QEE+GM DPGLLSYI++LCSQ+ FV+KVEAVIHP+FL +LLSP+ Q D LAL +ELEQ
Sbjct: 413 PQEEDGMTSDPGLLSYIDKLCSQEDFVTKVEAVIHPRFLEELLSPDPQMDFLALSQELEQ 472
Query: 458 EEGLTLAQ 465
EEGLTLAQ
Sbjct: 473 EEGLTLAQ 480
>gi|57528101 hypothetical protein LOC728130 [Homo sapiens]
Length = 557
Score = 438 bits (1126), Expect = e-122
Identities = 267/504 (52%), Positives = 314/504 (62%), Gaps = 48/504 (9%)
Query: 1 MASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNP 60
MAS+GA GP ++ P +LS ALPF P P P P P P
Sbjct: 51 MASNGAYPALGPGVTANPGTSLSVFTALPFTTPAPGPAHGPLLVTAGAP-------PGGP 103
Query: 61 LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
L+LS FPS+ LVT G SGAGA V V+++TE G + +Q Q +LTQT L APG
Sbjct: 104 LVLSNFPSTPLVTEQDGCGPSGAGASNVFVQMRTEVGPVKAAQAQTLVLTQTPLVWQAPG 163
Query: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQ--EG--PPGLP-PQPPPPVAQLVPIVPL 175
CGG+ P P + A+ V ++ ++ VG +Q EG GLP P PPPP AQL PIV
Sbjct: 164 ALCGGVVCPPPLLLAAAPVVPVMAAQVVGGTQACEGGWSQGLPLPPPPPPAAQLPPIVSQ 223
Query: 176 EKAWPGPHGTTGEGGPVATLSKPSLGDRSKISKDVYENFRQWQRYKALARRHLSQSPDTE 235
A P P G GEG ++ +K D + VYENFR WQ YK LARRHL QSPDTE
Sbjct: 224 GNAGPWPQGAHGEGSLASSQAKAPPDDSCN-PRSVYENFRLWQHYKPLARRHLPQSPDTE 282
Query: 236 ALSCFLIPVLRSLARLKPTMTLEEGLPLAVQEWEHTSNFDRMIFYEMAERFMEFEA-EEM 294
ALSCFLIPVLRSLAR KPTMTLEEGL A++EW+HTSNFDRMIFYEMAE+F+EFEA EEM
Sbjct: 283 ALSCFLIPVLRSLARRKPTMTLEEGLWRAMREWQHTSNFDRMIFYEMAEKFLEFEAEEEM 342
Query: 295 QIQNTQLMNGSQGLSPATPLKLDPLGPLASEVCQQPVYIPKKAASKT------------- 341
QIQ +Q M G Q L P +L+P GP A EV +QPVY+P KA K
Sbjct: 343 QIQKSQWMKGPQCLPPPATPRLEPRGPPAPEVVKQPVYLPSKAGPKAPTACLPPPRPQRP 402
Query: 342 -----RAPRRRQRKA-----------QRPPAPEAPKEIPPEAVKEYVDIMEWLVGTHL-A 384
R P R R+A QRP + P+EIPPE V+EYVDIME L+G L A
Sbjct: 403 VTKARRPPPRPHRRAETKARLPPPRPQRPAETKVPEEIPPEVVQEYVDIMEELLGPSLGA 462
Query: 385 TGESDGKQEEEG---QQQEEEGMYPDPGLLSYINELCSQKVFVSKVEAVIHPQFLADLLS 441
TGE + KQ EEG Q QEE+ PDPGLLSY ++LCSQK FV+KVEAVIHPQFL +LLS
Sbjct: 463 TGEPE-KQREEGEVKQPQEEDWTPPDPGLLSYTDKLCSQKDFVTKVEAVIHPQFLEELLS 521
Query: 442 PEKQRDPLALIEELEQEEGLTLAQ 465
P+ Q D LAL +ELEQEEGLTLAQ
Sbjct: 522 PDPQMDFLALSQELEQEEGLTLAQ 545
>gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 629
Score = 436 bits (1122), Expect = e-122
Identities = 264/504 (52%), Positives = 315/504 (62%), Gaps = 48/504 (9%)
Query: 1 MASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNP 60
MAS+GA + GP ++ P +LS ALPF P P P P P P
Sbjct: 123 MASNGAYPVLGPGVTANPGTSLSVFTALPFTTPAPGPAHGPLLVTAGAP-------PGGP 175
Query: 61 LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
L+LS FPS+ LVT G SGAGA V V+++TE G + +Q Q +LTQ L APG
Sbjct: 176 LVLSTFPSTPLVTEQDGCSPSGAGASNVFVQMRTEVGPVKAAQAQTLVLTQAPLVWQAPG 235
Query: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQ--EG--PPGLP-PQPPPPVAQLVPIVPL 175
CGG+ P P + A+ V ++ ++ VG +Q EG GLP P PPPP AQL PIV
Sbjct: 236 ALCGGVVCPPPLLLAAAPVVPVMAAQVVGGTQACEGGWSQGLPLPPPPPPAAQLPPIVSQ 295
Query: 176 EKAWPGPHGTTGEGGPVATLSKPSLGDRSKISKDVYENFRQWQRYKALARRHLSQSPDTE 235
A P P G GE ++ +K D + VYENFR WQ YK LARRHL QSPDTE
Sbjct: 296 GNAGPWPQGAHGESSLASSQAKAPPDDSCN-PRSVYENFRLWQHYKPLARRHLPQSPDTE 354
Query: 236 ALSCFLIPVLRSLARLKPTMTLEEGLPLAVQEWEHTSNFDRMIFYEMAERFMEFEA-EEM 294
ALSCFLIPVLRSLAR KPTMTLEEGL A++EW+HTSNFDRMIFYEMAE+F+EFEA EEM
Sbjct: 355 ALSCFLIPVLRSLARRKPTMTLEEGLWRAMREWQHTSNFDRMIFYEMAEKFLEFEAEEEM 414
Query: 295 QIQNTQLMNGSQGLSPATPLKLDPLGPLASEVCQQPVYIPKKAASKTRA-------PRRR 347
QIQ +Q M G Q L P +L+P GP A EV +QPVY+P KA K + P+R
Sbjct: 415 QIQKSQWMKGPQCLPPPATPRLEPRGPPAPEVVKQPVYLPSKAGPKAQTACLPPPRPQRP 474
Query: 348 QRKAQRPP----------------------APEAPKEIPPEAVKEYVDIMEWLVGTHL-A 384
KA+RPP + P+EIPPE V+EYVDIME L+G L A
Sbjct: 475 VTKARRPPPQPHRRAETKARLPPPRPQRPAETKVPEEIPPEVVQEYVDIMEELLGPSLGA 534
Query: 385 TGESDGKQEEEG---QQQEEEGMYPDPGLLSYINELCSQKVFVSKVEAVIHPQFLADLLS 441
TGE + KQ EEG Q QEE+ PDPGLLSYI++LCSQK FV+KVEAVIHPQFL +LLS
Sbjct: 535 TGEPE-KQREEGKVKQPQEEDWTPPDPGLLSYIDKLCSQKDFVTKVEAVIHPQFLEELLS 593
Query: 442 PEKQRDPLALIEELEQEEGLTLAQ 465
P+ Q D LAL ++LEQEEGLTLAQ
Sbjct: 594 PDPQMDFLALSQDLEQEEGLTLAQ 617
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 51.6 bits (122), Expect = 4e-06
Identities = 57/203 (28%), Positives = 76/203 (37%), Gaps = 32/203 (15%)
Query: 3 SDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPL- 61
+ GASA PG P A +P+PA P PD PP + S S D+PL
Sbjct: 1635 TQGASAAPGDPHPPGPPAPAAPAPAAP-----QPGPDPPPGTDSGIEEVDSRSSSDHPLE 1689
Query: 62 -MLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
+ SA S L GG G GAG G ++ P ++ + G
Sbjct: 1690 TISSASTLSSLSAEGGGSAGGGGGAG--------AGVASGPELLDTYV-------AYLDG 1734
Query: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVS---QEGPPGLPPQPPPPVAQLVPIVPLE- 176
GG P PP+ + L +A+G S + GP G P P + V +
Sbjct: 1735 QAFGGSSTPGPPYPPQLMTPSKLRGRALGASGGLRPGPSGGLRDPVTPTSPTVSVTGAGT 1794
Query: 177 ------KAWPGPHGTTGEGGPVA 193
+A GP GGPVA
Sbjct: 1795 DGLLALRACSGPPTAGVAGGPVA 1817
Score = 38.9 bits (89), Expect = 0.028
Identities = 43/135 (31%), Positives = 52/135 (38%), Gaps = 7/135 (5%)
Query: 38 PDHPPREPPPQPIMPSVFSPDNP---LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKT 94
P H PP P M + SPD+P L L PS G G GA +
Sbjct: 1013 PHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGG 1072
Query: 95 EGGSAEPSQTQNFILTQTALNSTAPGTPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEG 154
GGS++ + F L A S A P G P V + V+ P K G+
Sbjct: 1073 GGGSSQGPALRYFQLPPRAA-SAAMYVPARSGRGRKGPLVKQTKVEG-EPQKGGGLPPAP 1130
Query: 155 PPGLP--PQPPPPVA 167
P P PQPPP VA
Sbjct: 1131 SPTSPASPQPPPAVA 1145
Score = 31.2 bits (69), Expect = 5.8
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
Query: 2 ASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPD--- 58
A D L P M S ++ S +P PPT+ PP+ PP PP P +P
Sbjct: 894 AEDDRPYLAPPAMKFSRSLSVPGSEDIP-PPPTTSPPE-PPYSTPPVPSSSGRLTPSPRG 951
Query: 59 ---NPLMLSAFPSSLLVTGDG 76
NP P+S + DG
Sbjct: 952 GPFNPGSGGPLPASSPASFDG 972
Score = 30.4 bits (67), Expect = 9.9
Identities = 38/175 (21%), Positives = 54/175 (30%), Gaps = 11/175 (6%)
Query: 26 PALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPSSLLVTGDGGPCLSGAGA 85
P P P + P PPP P SP +P LLV P +
Sbjct: 1500 PRAPVTSGRGPPSEDGPGVPPPSPRRSVPPSPTSPRASEENGLPLLVLPPPAPSVDVEDG 1559
Query: 86 GKVIVK-----VKTEGGSAEPSQTQNFILTQTALNSTAPGTPCGGLEGP----APPFVTA 136
+ V+ ++ +P ++ AP TP + P APP + +
Sbjct: 1560 EFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDTPAPATPLPPVPPPAVAAAPPTLDS 1619
Query: 137 SNVKTILPSKAVGVSQEGPPGLP--PQPPPPVAQLVPIVPLEKAWPGPHGTTGEG 189
+ V +G P P PP P A P + P P T G
Sbjct: 1620 TASSLTSYDSEVATLTQGASAAPGDPHPPGPPAPAAPAPAAPQPGPDPPPGTDSG 1674
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 50.8 bits (120), Expect = 7e-06
Identities = 52/189 (27%), Positives = 62/189 (32%), Gaps = 17/189 (8%)
Query: 5 GASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQP-----IMPSVFSPDN 59
G A P P + P AA PSP P P PP P P +P
Sbjct: 1092 GGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTT 1151
Query: 60 PLMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAP 119
P P L T P GA +GG A PS + P
Sbjct: 1152 PAATPPSPKGGLAT----PPPKGAPTTPAATPPSPKGGLATPSPK-----GAPTTPAATP 1202
Query: 120 GTPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLP--PQPPPPVAQLVPIVPLEK 177
+P GGL P+P + T PS G++ P G P P PP + P P K
Sbjct: 1203 PSPKGGLATPSPKGAPTTPAAT-PPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPK 1261
Query: 178 AWPGPHGTT 186
P P T
Sbjct: 1262 GAPTPPAAT 1270
Score = 41.2 bits (95), Expect = 0.006
Identities = 54/199 (27%), Positives = 63/199 (31%), Gaps = 22/199 (11%)
Query: 5 GASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPI-MPSVFSPDN-PLM 62
G A P P + P AA PSP P+ PP PP P P+ SP P
Sbjct: 952 GGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTP 1011
Query: 63 LSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGTP 122
+ P S + P GA +G A T L AP TP
Sbjct: 1012 PAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPA-----------ATPLPKGAPTTP 1060
Query: 123 CGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPP---QPPPPVAQLVPIVPLEKAW 179
L P T S P A S +G P P P PP A P P
Sbjct: 1061 AATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAA--TPPSPKGGLA 1118
Query: 180 PGPHGTTGEGGPVATLSKP 198
PH +G P + P
Sbjct: 1119 TPPH----KGAPTTPAATP 1133
Score = 40.4 bits (93), Expect = 0.010
Identities = 52/200 (26%), Positives = 64/200 (32%), Gaps = 23/200 (11%)
Query: 10 PGPDMSMKPSAALSPSPALPFLPPTSDP---------PDHPPREPPPQPIMPSVFSPDNP 60
P P + PSA SP LPP P P P P P+ + +P
Sbjct: 859 PSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSP 918
Query: 61 LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
A P+ + P GA +GG A PS + T A P
Sbjct: 919 KKARATPAPKGIPASPSP--KGAPTPPAATPPSPKGGPATPS--PKWAPTPPA---ATPP 971
Query: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQP---PPPVAQLVPIVPLEK 177
+P GG P+P T PS G + P G P P PP P K
Sbjct: 972 SPKGGPATPSPKGAPTPPAAT-PPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPK 1030
Query: 178 AWPGPHGTT---GEGGPVAT 194
P T +G P AT
Sbjct: 1031 GASTPPAATPPSPKGSPAAT 1050
Score = 40.0 bits (92), Expect = 0.013
Identities = 42/178 (23%), Positives = 61/178 (34%), Gaps = 11/178 (6%)
Query: 2 ASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPL 61
AS+ P P + P A L +P +P P+ P PP PP S + L
Sbjct: 704 ASENCPVAPSPQNTCAPLATLVLAPEIPKSVPS---PSLPPAGTPPGTKKVDGISHTSAL 760
Query: 62 MLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEG--GSAEPSQTQNFILTQTALNSTAP 119
A T D G + + G + + G + QT+ T S P
Sbjct: 761 APVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKR---PPTKKGSAGP 817
Query: 120 GTPCGGLEGPAPPFVTA---SNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVP 174
TP G L P P + N + SK + P P+ P + + P+ P
Sbjct: 818 DTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSP 875
Score = 39.7 bits (91), Expect = 0.016
Identities = 52/190 (27%), Positives = 63/190 (33%), Gaps = 11/190 (5%)
Query: 2 ASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPI-MPSVFSPDN- 59
A G A P P + P AA PSP P+ PP PP P P+ SP
Sbjct: 926 APKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGA 985
Query: 60 PLMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAP 119
P +A P S GGP V P+ T F + + P
Sbjct: 986 PTPPAATPPS----PKGGPATPSPKGAPTPPAVTPPSPKGSPAATP-FPKGASTPPAATP 1040
Query: 120 GTPCGGLEGPAPPFVTASNVKTILPSKAVG---VSQEGPPGLPPQPPPPVAQLVPIVPLE 176
+P G P + LPS G S +G P PP PP + P P
Sbjct: 1041 PSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAP-TPPAATPPSPKGGPATPSP 1099
Query: 177 KAWPGPHGTT 186
K P P T
Sbjct: 1100 KGAPMPPAAT 1109
Score = 38.5 bits (88), Expect = 0.036
Identities = 53/196 (27%), Positives = 62/196 (31%), Gaps = 13/196 (6%)
Query: 7 SALPGPDMSMKPSAALSPSP-ALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLSA 65
+A P P + AA PSP P P P P PP P+ SP M A
Sbjct: 1048 AATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPA 1107
Query: 66 FPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGTPCGG 125
G P GA +GG A P + P +P GG
Sbjct: 1108 ATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPK-----GAPTTPAATPPSPKGG 1162
Query: 126 LEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPLEKAWPGPHGT 185
L P PP + PS G++ P G P P A P A P P G
Sbjct: 1163 LATP-PPKGAPTTPAATPPSPKGGLATPSPKGAPTTP----AATPPSPKGGLATPSPKGA 1217
Query: 186 TGEGGPVATLSKPSLG 201
P AT P G
Sbjct: 1218 PTT--PAATPPSPKGG 1231
Score = 38.1 bits (87), Expect = 0.048
Identities = 50/219 (22%), Positives = 74/219 (33%), Gaps = 34/219 (15%)
Query: 15 SMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPD--NPLMLSAFPSS--- 69
++ P AL P PA+ P P P+E P P SP P PS
Sbjct: 1541 TLAPKEALIP-PAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKEL 1599
Query: 70 LLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGTPCGGLEGP 129
L+ P A + E G A P+ ++ P TP + P
Sbjct: 1600 LIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPA--------PKGTPTSPPVTPSSLKDSP 1651
Query: 130 APPFVTASNVKTILPSKAVGV-SQEGPPGLPPQPPPPVAQLVPIV--PLEKA-------- 178
P + +P + G+ +++GP L P + PI+ P K
Sbjct: 1652 TSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSA 1711
Query: 179 -----WPGPHGTTGEGGPVATLSK----PSLGDRSKISK 208
P P G GP++T++ P D SK +K
Sbjct: 1712 TSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAK 1750
Score = 36.6 bits (83), Expect = 0.14
Identities = 54/203 (26%), Positives = 68/203 (33%), Gaps = 46/203 (22%)
Query: 5 GASALPGPDMSMKPSAALSPSP-ALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLML 63
G A P P + AA PSP P PP P P PP + + +P +
Sbjct: 1230 GGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPP--SLKGGLATPPH---- 1283
Query: 64 SAFPSSLLVT---GDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
P+ +VT GGP S +G P+ T +PG
Sbjct: 1284 KGAPNPAVVTPPSPKGGPATS-----------PPKGAPTPPAAT-------PPSPKGSPG 1325
Query: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPLEKAWP 180
TP P PP VT S +G P LP P ++ P P K P
Sbjct: 1326 TP-PPKGAPTPPAVTPP-------------SPKGTPTLPATTPS--SKGGPTTPSSKEGP 1369
Query: 181 GPHGTT--GEGGPVATLSKPSLG 201
P T +GGP T P G
Sbjct: 1370 TPPAATPSHKGGPAMTPPSPKRG 1392
Score = 35.0 bits (79), Expect = 0.40
Identities = 52/208 (25%), Positives = 74/208 (35%), Gaps = 19/208 (9%)
Query: 10 PGPDMSMKPSAALSPSPALPFLPPTSDP--PDHPPREPPPQ------PIMPSVF--SPDN 59
P P + P A SPSP PP P P+ P P P+ P+ PS SP +
Sbjct: 1594 PSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTS 1653
Query: 60 PLMLSA-FPSSLLVTGDGGPCLSGAGAGK-VIVKVKTEGGSAEPSQTQNFILTQTALNST 117
P ++ +++ G P G A K V+V E + T+ T+ + ++
Sbjct: 1654 PASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATS 1713
Query: 118 APGTP----CGGLEGPAPPFVTAS--NVKTILPSKAVGVSQEGPPGLPPQPPPPVAQL-V 170
P P G +GP A V+ A G P P PP A +
Sbjct: 1714 PPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPL 1773
Query: 171 PIVPLEKAWPGPHGTTGEGGPVATLSKP 198
EK P P + P +S P
Sbjct: 1774 TAAAFEKVLPKPESASVSAAPSPPVSLP 1801
Score = 32.7 bits (73), Expect = 2.0
Identities = 44/202 (21%), Positives = 60/202 (29%), Gaps = 27/202 (13%)
Query: 23 SPSP-ALPFLPPTSDPPDHPPREPPPQPI---------MPSVFSPDNPLMLSAFPSSLLV 72
SPSP + P T PP P PI + + F P+N L S
Sbjct: 793 SPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPAT 852
Query: 73 T-GDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGTPCG------- 124
T P GA + + +G + P +T + P TP
Sbjct: 853 THSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALS 912
Query: 125 --------GLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPLE 176
PAP + AS P+ + P G P P P A P
Sbjct: 913 MTSSSPKKARATPAPKGIPASPSPKGAPTPPAA-TPPSPKGGPATPSPKWAPTPPAATPP 971
Query: 177 KAWPGPHGTTGEGGPVATLSKP 198
GP + +G P + P
Sbjct: 972 SPKGGPATPSPKGAPTPPAATP 993
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 50.4 bits (119), Expect = 9e-06
Identities = 57/193 (29%), Positives = 69/193 (35%), Gaps = 36/193 (18%)
Query: 10 PGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPSS 69
PGP S P P +P PP PP++PPPQ P P P
Sbjct: 49 PGPGQS-------GPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPP 101
Query: 70 LLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAP--GTPCGGLE 127
G G + GSA P+ + +A +T P G P G
Sbjct: 102 PPQDSSKPVVAQGPGPAPGV-------GSAPPA-------SSSAPPATPPTSGAPPGSGP 147
Query: 128 GPA---PPFVTASNVKTILPSKAVGVSQEGPPGLPPQ---PPPPVAQLVPIVPLEKAWPG 181
GP PP VT++ P+ G P PPQ PPPP A + P K PG
Sbjct: 148 GPTPTPPPAVTSAPPGAPPPTP----PSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPG 203
Query: 182 PHGTTG---EGGP 191
P G G GGP
Sbjct: 204 PGGPKGGKMPGGP 216
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 50.1 bits (118), Expect = 1e-05
Identities = 55/184 (29%), Positives = 71/184 (38%), Gaps = 27/184 (14%)
Query: 5 GASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPP--PQPIMPSVFSPDNPLM 62
G ++P P + P+ P LPP+ PP PP P P P MP P+M
Sbjct: 512 GNMSMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPP------PVM 565
Query: 63 LSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGTP 122
+ P+S+ G P LS AG V+ P +L +L+STAP
Sbjct: 566 PPSLPTSVPPPG-MPPSLSSAGPPPVLPPPSLSSAGPPP------VLPPPSLSSTAPPPV 618
Query: 123 CGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPV----AQLVPIVPLEKA 178
P PP +A+ I P GV Q PP L P PP + VP P
Sbjct: 619 M-----PLPPLSSATPPPGIPPP---GVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPAL 670
Query: 179 WPGP 182
P P
Sbjct: 671 LPTP 674
Score = 35.4 bits (80), Expect = 0.31
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 10 PGPDMSMKPSAALSPS--PALPFLPPTSDP-PDHPPREPPPQPIMPSVFSP 57
P P M P + + PS PA +P T P P PP PPP P P V P
Sbjct: 1514 PPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPPPPPVIKP 1564
Score = 34.7 bits (78), Expect = 0.53
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 12 PDMSMKPSAALSPSPALP--FLPPTSDPPDHPPREPPPQPIMPS 53
P M PS + P P P + PPTS P PP +P P PS
Sbjct: 154 PGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPS 197
Score = 33.1 bits (74), Expect = 1.5
Identities = 27/82 (32%), Positives = 32/82 (39%), Gaps = 15/82 (18%)
Query: 131 PPFVTASNVKTILPSKAVGVSQEGPPGLPPQ----------PPP--PVAQLVPIVPLEKA 178
PPFV S + LP+ V PP LPP PPP P + P +P
Sbjct: 518 PPFVPYSQMPPPLPTMPPPVL---PPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVP 574
Query: 179 WPGPHGTTGEGGPVATLSKPSL 200
PG + GP L PSL
Sbjct: 575 PPGMPPSLSSAGPPPVLPPPSL 596
Score = 30.8 bits (68), Expect = 7.6
Identities = 44/156 (28%), Positives = 58/156 (37%), Gaps = 27/156 (17%)
Query: 22 LSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSP--DNPLMLSAFPSSLLVTGDGGPC 79
L P P +PP S P PPPQP PS + P P + A PS P
Sbjct: 143 LESPPESPPVPPGSYMPPSQSYMPPPQP-PPSYYPPTSSQPYLPPAQPS---------PS 192
Query: 80 LSGAGAGKVIVKVKTEGGSAEPSQTQNFIL-TQTALNST--APGTPCGG-----LEGPAP 131
S + T S+ S +Q+++ +Q+ L S+ +P P G L P P
Sbjct: 193 QSPPSQSYL---APTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPP 249
Query: 132 PFVTASNVKTI----LPSKAVGVSQEGPPGLPPQPP 163
P N T+ L S A S E P P
Sbjct: 250 PSAPPGNKTTVQQEPLESGAKNKSTEQQQAAPEPDP 285
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 48.9 bits (115), Expect = 3e-05
Identities = 56/194 (28%), Positives = 69/194 (35%), Gaps = 31/194 (15%)
Query: 5 GASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLS 64
GA P P + P AA+ P P LP PP PPP P+ + P PL +
Sbjct: 939 GAGIPPPPPL---PGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 995
Query: 65 AFPSSLLVTGDG---GPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGT 121
P + G G P L GAG I G+ P P
Sbjct: 996 GIPPPPPLPGAGIPPPPPLPGAG----IPPPPPLPGAGIP-----------------PPP 1034
Query: 122 PCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGP---PGLPPQPPPPVAQLVPIVPLEKA 178
P G P PP + + + P G+ P G+PP PP P A + P PL A
Sbjct: 1035 PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1094
Query: 179 W-PGPHGTTGEGGP 191
P P G G P
Sbjct: 1095 GIPPPPPLPGVGIP 1108
Score = 48.5 bits (114), Expect = 4e-05
Identities = 55/194 (28%), Positives = 68/194 (35%), Gaps = 29/194 (14%)
Query: 5 GASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLS 64
G LP P + P A + P P LP PP PPP P+ + P PL +
Sbjct: 904 GTEMLPPPPPPL-PGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGA 962
Query: 65 AFPSSLLVTGDG---GPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGT 121
P + G G P L GAG I G+ P P
Sbjct: 963 GIPLPPPLPGAGIPPPPPLPGAG----IPPPPPLPGAGIP-----------------PPP 1001
Query: 122 PCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGP---PGLPPQPPPPVAQLVPIVPLEKA 178
P G P PP + + + P G+ P G+PP PP P A + P PL A
Sbjct: 1002 PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1061
Query: 179 W-PGPHGTTGEGGP 191
P P G G P
Sbjct: 1062 GIPPPPPLPGAGIP 1075
Score = 48.1 bits (113), Expect = 5e-05
Identities = 54/194 (27%), Positives = 68/194 (35%), Gaps = 20/194 (10%)
Query: 5 GASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLS 64
GA P P + P A + P P LP PP PPP P+ + P PL +
Sbjct: 1005 GAGIPPPPPL---PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1061
Query: 65 AFPSSLLVTGDG---GPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGT 121
P + G G P L GAG + G P + P
Sbjct: 1062 GIPPPPPLPGAGIPPPPPLPGAG---IPPPPPLPGAGIPPPPPLPGV-------GIPPPP 1111
Query: 122 PCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGP---PGLPPQPPPPVAQLVPIVPLEKA 178
P G P PP + + + P G+ P G+PP PP P A + P PL A
Sbjct: 1112 PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGA 1171
Query: 179 W-PGPHGTTGEGGP 191
P P G G P
Sbjct: 1172 GIPPPPPLPGVGIP 1185
Score = 46.2 bits (108), Expect = 2e-04
Identities = 49/177 (27%), Positives = 62/177 (35%), Gaps = 19/177 (10%)
Query: 5 GASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLS 64
GA P P + P A + P P LP PP PPP P+ + P PL
Sbjct: 1049 GAGIPPPPPL---PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGV 1105
Query: 65 AFPSSLLVTGDG---GPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGT 121
P + G G P L GAG + G P + P
Sbjct: 1106 GIPPPPPLPGAGIPPPPPLPGAG---IPPPPPLPGAGIPPPPPLPRV-------GIPPPP 1155
Query: 122 PCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGP---PGLPPQPPPPVAQLVPIVPL 175
P G P PP + + + P VG+ P G+PP PP P A + P PL
Sbjct: 1156 PLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPL 1212
Score = 45.8 bits (107), Expect = 2e-04
Identities = 58/211 (27%), Positives = 77/211 (36%), Gaps = 32/211 (15%)
Query: 3 SDGASALPGPDMSMKPSAALS-------PSPALPFLPPTSD----PPDHPPRE----PPP 47
++ +S++PG M P L PS A+P PP PP PP PPP
Sbjct: 864 TESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPP 923
Query: 48 QPIMPSVFSPDNPLMLSAFPSSLLVTGDG---GPCLSGAGAGKVIVKVKTEGGSAEPSQT 104
P+ + P PL + P + G P L GAG + + G P
Sbjct: 924 PPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAG---IPLPPPLPGAGIPPPPP 980
Query: 105 QNFILTQTALNSTAPGTPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGP---PGLPPQ 161
L + P P G P PP + + + P G+ P G+PP
Sbjct: 981 ----LPGAGI---PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP 1033
Query: 162 PPPPVAQLVPIVPLEKAW-PGPHGTTGEGGP 191
PP P A + P PL A P P G G P
Sbjct: 1034 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1064
Score = 43.5 bits (101), Expect = 0.001
Identities = 55/196 (28%), Positives = 69/196 (35%), Gaps = 20/196 (10%)
Query: 5 GASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLS 64
GA P P + P A + P P LP PP PPP P+ + P PL +
Sbjct: 1038 GAGIPPPPPL---PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1094
Query: 65 AFPSSLLVTGDG---GPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGT 121
P + G G P L GAG + G P A P
Sbjct: 1095 GIPPPPPLPGVGIPPPPPLPGAG---IPPPPPLPGAGIPPPPP-----LPGAGIPPPPPL 1146
Query: 122 PCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGP---PGLPPQPPPPVAQLVPIVPLEKA 178
P G+ P PP + + + P G+ P G+PP PP P + P PL A
Sbjct: 1147 PRVGI--PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGA 1204
Query: 179 W-PGPHGTTGEGGPVA 193
P P G G P A
Sbjct: 1205 GIPPPPPLPGMGIPPA 1220
Score = 39.7 bits (91), Expect = 0.016
Identities = 55/194 (28%), Positives = 70/194 (36%), Gaps = 27/194 (13%)
Query: 15 SMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPI-------MPSVFSPDNP-----LM 62
+ K S + P LP +S P PPP P+ +PS P P M
Sbjct: 848 AFKNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEM 907
Query: 63 LSAFPSSLLVTG-DGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGT 121
L P L G P L GAG I+ + G+ P L A+ P
Sbjct: 908 LPPPPPPLPGAGIPPPPPLPGAG----ILPLPPLPGAGIPPPPP---LPGAAI---PPPP 957
Query: 122 PCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGP---PGLPPQPPPPVAQLVPIVPLEKA 178
P G P PP + + + P G+ P G+PP PP P A + P PL A
Sbjct: 958 PLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1017
Query: 179 W-PGPHGTTGEGGP 191
P P G G P
Sbjct: 1018 GIPPPPPLPGAGIP 1031
Score = 39.7 bits (91), Expect = 0.016
Identities = 48/181 (26%), Positives = 63/181 (34%), Gaps = 50/181 (27%)
Query: 9 LPG---PDMSMKPSAALSPSPALP--FLPPTSDPPDHPPREPPPQPIMPSV-FSPDNPLM 62
LPG P P A + P P LP +PP PP P PP P +P V P PL
Sbjct: 1102 LPGVGIPPPPPLPGAGIPPPPPLPGAGIPP---PPPLPGAGIPPPPPLPRVGIPPPPPLP 1158
Query: 63 LSAFPSSLLVTGDG---GPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAP 119
+ P + G G P L G G P
Sbjct: 1159 GAGIPPPPPLPGAGIPPPPPLPGVG--------------------------------IPP 1186
Query: 120 GTPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQ----PPPPVAQL--VPIV 173
P G+ P PP + + + P +G+ P LPP PPPP+ + P++
Sbjct: 1187 PPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLPVSGPPLL 1246
Query: 174 P 174
P
Sbjct: 1247 P 1247
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 47.8 bits (112), Expect = 6e-05
Identities = 50/179 (27%), Positives = 68/179 (37%), Gaps = 33/179 (18%)
Query: 19 SAALSPSPALPF-----LPPTSDPPDHPPREP-----PPQPIMPSVF----SPDNPLMLS 64
S+ LS PA P+ PP+ PPD PR+P P + P+ + P M
Sbjct: 148 SSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQ 207
Query: 65 AFPSS------LLVTGDG----GPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTAL 114
A P + L G G GP + G G GG P T ++ +
Sbjct: 208 APPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGA 267
Query: 115 N----STAPGTPCGGLEGP-APPFVTASNVKTILPS----KAVGVSQEGPPGLPPQPPP 164
+ + P TP GG P APP +V LP + + + PPGL QP P
Sbjct: 268 SGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLP 326
Score = 35.8 bits (81), Expect = 0.24
Identities = 47/174 (27%), Positives = 56/174 (32%), Gaps = 19/174 (10%)
Query: 10 PGPDMSMKPSAALSPSPALPFLPPTSDPPD---------HPPREPPPQPIMPSVFSPDNP 60
PGP P + +S S A P PP S + +P P P P P
Sbjct: 544 PGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPP 603
Query: 61 LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAP- 119
+ S+ L T S AG G PS T +P
Sbjct: 604 VPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPP 663
Query: 120 ----GTPCG--GLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVA 167
GTP G G PA P T+ P + GP GLP PPPP A
Sbjct: 664 SFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGP---LPPAGPSGLPSLPPPPAA 714
Score = 30.8 bits (68), Expect = 7.6
Identities = 48/177 (27%), Positives = 61/177 (34%), Gaps = 37/177 (20%)
Query: 25 SPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPSSLLVTGDGGPCLSGA- 83
SP+L L P P H PP + S P+ P + S+ SS + PC +
Sbjct: 533 SPSLGSLRPYPPGPAH--LPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSP 590
Query: 84 -----GAGKVIVKVKT-EGGSAEPSQTQNFILTQTALNSTA--PGTPCGGLEGPAP-PFV 134
GA V T SA S + + A TA PG P G P+P +
Sbjct: 591 SQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYK 650
Query: 135 TASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPLEKAWPGPHGTTGEGGP 191
TA+ PPG P PP P PG GT+ GP
Sbjct: 651 TAT-----------------PPGYKPGSPPSFRTGTP--------PGYRGTSPPAGP 682
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 47.8 bits (112), Expect = 6e-05
Identities = 50/179 (27%), Positives = 68/179 (37%), Gaps = 33/179 (18%)
Query: 19 SAALSPSPALPF-----LPPTSDPPDHPPREP-----PPQPIMPSVF----SPDNPLMLS 64
S+ LS PA P+ PP+ PPD PR+P P + P+ + P M
Sbjct: 148 SSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQ 207
Query: 65 AFPSS------LLVTGDG----GPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTAL 114
A P + L G G GP + G G GG P T ++ +
Sbjct: 208 APPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGA 267
Query: 115 N----STAPGTPCGGLEGP-APPFVTASNVKTILPS----KAVGVSQEGPPGLPPQPPP 164
+ + P TP GG P APP +V LP + + + PPGL QP P
Sbjct: 268 SGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLP 326
Score = 35.8 bits (81), Expect = 0.24
Identities = 47/174 (27%), Positives = 56/174 (32%), Gaps = 19/174 (10%)
Query: 10 PGPDMSMKPSAALSPSPALPFLPPTSDPPD---------HPPREPPPQPIMPSVFSPDNP 60
PGP P + +S S A P PP S + +P P P P P
Sbjct: 544 PGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPP 603
Query: 61 LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAP- 119
+ S+ L T S AG G PS T +P
Sbjct: 604 VPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPP 663
Query: 120 ----GTPCG--GLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVA 167
GTP G G PA P T+ P + GP GLP PPPP A
Sbjct: 664 SFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGP---LPPAGPSGLPSLPPPPAA 714
Score = 30.8 bits (68), Expect = 7.6
Identities = 48/177 (27%), Positives = 61/177 (34%), Gaps = 37/177 (20%)
Query: 25 SPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPSSLLVTGDGGPCLSGA- 83
SP+L L P P H PP + S P+ P + S+ SS + PC +
Sbjct: 533 SPSLGSLRPYPPGPAH--LPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSP 590
Query: 84 -----GAGKVIVKVKT-EGGSAEPSQTQNFILTQTALNSTA--PGTPCGGLEGPAP-PFV 134
GA V T SA S + + A TA PG P G P+P +
Sbjct: 591 SQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYK 650
Query: 135 TASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPLEKAWPGPHGTTGEGGP 191
TA+ PPG P PP P PG GT+ GP
Sbjct: 651 TAT-----------------PPGYKPGSPPSFRTGTP--------PGYRGTSPPAGP 682
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 47.8 bits (112), Expect = 6e-05
Identities = 45/157 (28%), Positives = 55/157 (35%), Gaps = 47/157 (29%)
Query: 18 PSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPSSLLVTGDGG 77
P A PSP LP PP PP PP PPP P +PS +P
Sbjct: 618 PYTASQPSPPLP--PPPPPPPPPPPPPPPPPPPLPSQSAP-------------------- 655
Query: 78 PCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGTPCGGLEGPAPPFVTAS 137
S A + VK T SQ + + P PP + +
Sbjct: 656 ---SAGSAAPMFVKYSTITRLQNASQHSGAL-----------------FKPPTPPVMQSQ 695
Query: 138 NVKTILPSKAVGVSQEGPPGLPPQPPPP---VAQLVP 171
+VK + GV PP PP PP P +AQL P
Sbjct: 696 SVKPQILVPPNGVVPPPPP--PPPPPTPGSAMAQLKP 730
Score = 42.7 bits (99), Expect = 0.002
Identities = 51/168 (30%), Positives = 62/168 (36%), Gaps = 26/168 (15%)
Query: 10 PGPDMSMKPSAALSPSPA--LPFLPPT---------SDPPDHPPREPPPQPIMPSVFSPD 58
P P S L P PA P PP S P P PPP P VF P
Sbjct: 871 PPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPP 930
Query: 59 NPLMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTA 118
P + A P T P SG+ GK K + GG P Q NS+
Sbjct: 931 PPSPVPAPPPPPPPTASPTPDKSGS-PGKKTSKTSSPGGKKPPPTPQR--------NSSI 981
Query: 119 PGTPCGGLEGPAP--PFVTASNVKTILPSKAVGVSQE--GPPGLPPQP 162
+ G E P P P V + K P+++ S+E PP PP+P
Sbjct: 982 KSS--SGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKP 1027
Score = 38.9 bits (89), Expect = 0.028
Identities = 49/196 (25%), Positives = 69/196 (35%), Gaps = 39/196 (19%)
Query: 10 PGPDMSMKPSAALSPSPALPFLPPTSDPPD-------------HPPREPPPQPIMPSVFS 56
P P A L P+P P LP S PP PP PPP PI P+
Sbjct: 716 PPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPI-PAPLP 774
Query: 57 PDNPLMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNS 116
P P P L+ + + K + V T+ P+ Q A +
Sbjct: 775 PQAP------PKPLVT-------IPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPA 821
Query: 117 T----APGTPCGGLEGPAPPFVTASNVK------TILPSKAVGVSQEGPPGLPPQPPPPV 166
+ +P TP + P P + K + +PS ++ + PP PP PP
Sbjct: 822 SYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFPP--PPTPPAME 879
Query: 167 AQLVPIVPLEKAWPGP 182
+Q + VP A P
Sbjct: 880 SQPLKPVPANVAPQSP 895
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 47.8 bits (112), Expect = 6e-05
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 20/144 (13%)
Query: 41 PPREPP-PQPIMPS-VFSPDNPLMLSAFPSSLLVTGDGGPCLSGAGAGKV--IVKVKTEG 96
PP PP QPI P+ P L+ P+S++ P SGA G + ++ G
Sbjct: 962 PPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPA----PAGSGAPPGSLGPSEQIGQAG 1017
Query: 97 GSAEPSQTQNFILTQTALNSTAPGTPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEG-- 154
+A P Q Q Q + PG P G GP+P F +++P G G
Sbjct: 1018 STAGPQQQQPAGAPQPG--AVPPGVPPPGPHGPSP-FPNQQTPPSMMPGAVPGSGHPGVA 1074
Query: 155 -------PPGLPPQPPPPVAQLVP 171
P G+PP PPPP ++P
Sbjct: 1075 GNAPLGLPFGMPPPPPPPAPSIIP 1098
Score = 34.3 bits (77), Expect = 0.69
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 6 ASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDH-----------PPREPPPQPIMPSV 54
AS +P P S P +L PS + T+ P PP PPP P PS
Sbjct: 991 ASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP 1050
Query: 55 FSPDNPLMLSAFPSSLLVTGDGGPCLSG 82
F P+ S P + V G G P ++G
Sbjct: 1051 F-PNQQTPPSMMPGA--VPGSGHPGVAG 1075
>gi|55749779 DENN/MADD domain containing 1A isoform 1 [Homo sapiens]
Length = 1009
Score = 47.8 bits (112), Expect = 6e-05
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 27/168 (16%)
Query: 15 SMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPSSLLVTG 74
S PS +P+ A PF P S PP P P P+ P V P M +A P+ LV+
Sbjct: 796 STLPSRPATPNVATPFTPQFSFPPAGTPTPFPQPPLNPFV-----PSMPAAPPTLPLVST 850
Query: 75 DGGP------CLSGAGAGKVIVKVKTEGGSAEPSQTQNFI--LTQTALNSTAP-GTPCGG 125
GP L A A +++ + G P ++Q + L+ L P GT
Sbjct: 851 PAGPFGAPPASLGPAFASGLLL---SSAGFCAPHRSQPNLSALSMPNLFGQMPMGTHTSP 907
Query: 126 LEGPAPPFVTASNVKTILPSKAVGVSQE----------GPPGLPPQPP 163
L+ PP V S ++T+ +++ + E PP LPP+PP
Sbjct: 908 LQPLGPPAVAPSRIRTLPLARSSARAAETKQGLALRPGDPPLLPPRPP 955
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 47.4 bits (111), Expect = 8e-05
Identities = 89/384 (23%), Positives = 138/384 (35%), Gaps = 68/384 (17%)
Query: 2 ASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPL 61
A + + +P P P+ + P P +P P P +EP P +P V P P+
Sbjct: 9296 APEEVAPVPIPKKVEPPAPKVPEVPKKP-VPEEKKPVPVPKKEPAAPPKVPEV--PKKPV 9352
Query: 62 MLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGT 121
P V V K E A+ + Q ++T+ +
Sbjct: 9353 PEEKIP--------------------VPVAKKKEAPPAKVPEVQKGVVTEEKITIVTQRE 9392
Query: 122 PCGGLEGPAPPFVTASNVKTILPSKAVGVSQEG---PPGLPPQPPPPVAQLVPIVPLEKA 178
E P P K K V +E PP +P P PV + VP+ A
Sbjct: 9393 -----ESPPPAVPEIPKKKVPEERKPVPRKEEEVPPPPKVPALPKKPVPEEKVAVPVPVA 9447
Query: 179 WPGPHGTTGEGGPVATLSKPSLGDRSKISKDVYENFRQWQR-----YKALARRHLSQSPD 233
P P A +SK ++ + + + +F QR ++ A S S +
Sbjct: 9448 KKAPP-------PRAEVSKKTVVEEKRFVAEEKLSFAVPQRVEVTRHEVSAEEEWSYSEE 9500
Query: 234 TEALSCFLIPVLRSLARLKPTMTLEEGLPLAVQEWEHTSNFDRMIFYEMAERFME-FEAE 292
E +S I V R R EE V E+E + + E + EAE
Sbjct: 9501 EEGVS---ISVYREEER-------EEEEEAEVTEYEVMEEPEEYVVEEKLHIISKRVEAE 9550
Query: 293 EMQIQNTQLMNGSQGLSPATPLKLDPLGPLASEVCQQPVYI-PKKAASKTRAPRRRQRKA 351
++ T+ L P P K++ P ++V + P I P+K K AP ++ K
Sbjct: 9551 PAEV--TERQEKKIVLKPKIPAKIEE--PPPAKVPEAPKKIVPEK---KVPAPVPKKEKV 9603
Query: 352 QRPPAPEAPK------EIPPEAVK 369
P PE PK ++PP+ +K
Sbjct: 9604 PPPKVPEEPKKPVPEKKVPPKVIK 9627
Score = 35.0 bits (79), Expect = 0.40
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 266 QEWEHTSNFDRMIFYEMAERFMEFEAEEMQIQNTQLMNGSQGLSPATPLKLDPLGPLASE 325
+E+E T +D+ YE E + +E E I + P+K P P+ ++
Sbjct: 9757 EEYEPTEEYDQYEEYEERE-YERYEEHEEYITEPE---------KPIPVKPVPEEPVPTK 9806
Query: 326 VCQQPVYIPKKAASKTRAPRRRQRKAQRPP--APEAPKEIPPEAVK 369
P + KKA + + P +K + PP PE PK++ E ++
Sbjct: 9807 PKAPPAKVLKKAVPEEKVPVPIPKKLKPPPPKVPEEPKKVFEEKIR 9852
Score = 35.0 bits (79), Expect = 0.40
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 14/137 (10%)
Query: 334 PKKAASKTRAPRRRQRKAQRPPAPEAPKEIPPEAVKEYVDIMEWLVGTHLATGESDGKQE 393
PK+ ++ + P R+ A PE PKE+ PE V E V TH+ E +E
Sbjct: 9874 PKRVVAEEKVPVPRKEVAPPVRVPEVPKELEPEEV-----AFEEEVVTHV---EEYLVEE 9925
Query: 394 EEGQQQEEEGMYPDPGLLSYINELCSQKVFVSKVEAVIHPQFLADLLSPEKQRDPLALIE 453
EE EEE + ++ I V V +V P+ + P+K+ P A +
Sbjct: 9926 EEEYIHEEEEFITEEEVVPVI------PVKVPEVPRKPVPEEKKPVPVPKKKEAPPAKVP 9979
Query: 454 ELEQEEGLTLAQLVQKR 470
E+ ++ + L+ K+
Sbjct: 9980 EVPKKPEEKVPVLIPKK 9996
Score = 32.7 bits (73), Expect = 2.0
Identities = 40/182 (21%), Positives = 59/182 (32%), Gaps = 29/182 (15%)
Query: 17 KPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPSSLLVTGDG 76
KP A P P +P P P P PP +P +P P+ P +A P +
Sbjct: 10517 KPEA---PPPKVPEAPKEVVPEKKVPVPPPKKPEVPPTKVPEVP--KAAVPEKKVPEA-- 10569
Query: 77 GPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPGTPCGGLEGPAPPFVTA 136
+ K E E + ++ + + + P P P
Sbjct: 10570 -------------IPPKPESPPPEVPEAPKEVVPEKKVPAAPPKKP------EVTPVKVP 10610
Query: 137 SNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPLEKAWPGPHGTTGEGGPVATLS 196
K ++P K V V PP P PP V ++ + EK P E P
Sbjct: 10611 EAPKEVVPEKKVPVP---PPKKPEVPPTKVPEVPKVAVPEKKVPEAIPPKPESPPPEVFE 10667
Query: 197 KP 198
+P
Sbjct: 10668 EP 10669
Score = 32.0 bits (71), Expect = 3.4
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 333 IPKKAASKTRAPRRRQRKAQRPPA--PEAPKEIPPEAVK 369
+PKK + + P +K + PPA PE PK++ PE K
Sbjct: 10035 VPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKK 10073
Score = 32.0 bits (71), Expect = 3.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 333 IPKKAASKTRAPRRRQRKAQRPP--APEAPKEIPPE 366
+PK A + + P K + PP PEAPKE+ PE
Sbjct: 10556 VPKAAVPEKKVPEAIPPKPESPPPEVPEAPKEVVPE 10591
Score = 31.2 bits (69), Expect = 5.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 334 PKKAASKTRAPRRRQRKAQRPPA--PEAPKEIPPE 366
PKK + +AP +K + PP PE PKE+ PE
Sbjct: 10697 PKKPVPEKKAPAVVAKKPELPPVKVPEVPKEVVPE 10731
Score = 31.2 bits (69), Expect = 5.8
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 333 IPKKAASKTRAPRRRQRKAQRPPA--PEAPKEIPPE 366
+PK+ + + P +K + PPA PE PKE+ PE
Sbjct: 10724 VPKEVVPEKKVPLVVPKKPEAPPAKVPEVPKEVVPE 10759
Score = 30.8 bits (68), Expect = 7.6
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 333 IPKKAASKTRAPRRRQRKAQRPPAPEAPKEIPPEAVKEYVDIMEWLVGTHLATGESDGKQ 392
+PKK + + P +K + PP P+ PK+ P V + E ++ E +
Sbjct: 10063 VPKKLIPEEKKPTPVPKKVEAPP-PKVPKKREPVPVPVALPQEEEVLFEEEIVPEEEVLP 10121
Query: 393 EEEGQQQEEEGMYPD 407
EEE EEE + P+
Sbjct: 10122 EEEEVLPEEEEVLPE 10136
Score = 30.4 bits (67), Expect = 9.9
Identities = 55/229 (24%), Positives = 88/229 (38%), Gaps = 32/229 (13%)
Query: 158 LPPQPPPPVAQLVPIVPLEKAWPGPHGTTGEGGPVATLSKPSLGDRSKISKDVYENFRQW 217
+P +P P + P L+KA P P+ KP + K V+E
Sbjct: 9798 VPEEPVPTKPKAPPAKVLKKAVPEEKVPV----PIPKKLKPPPPKVPEEPKKVFEE---- 9849
Query: 218 QRYKALARRHLSQSPDTEALSCFLIPVLRSLARLK-PTMTLEEGLPLAVQEWEHTSNFDR 276
+ ++ +R Q TE + + R +A K P E P+ V E +
Sbjct: 9850 KIRISITKREKEQV--TEPAAKVPMKPKRVVAEEKVPVPRKEVAPPVRVPEVPKELEPEE 9907
Query: 277 MIFYEMAERFME---FEAEEMQIQNTQLMNGSQGLSPATPLKLD--PLGPLASEVCQQPV 331
+ F E +E E EE I + + + P P+K+ P P+ E ++PV
Sbjct: 9908 VAFEEEVVTHVEEYLVEEEEEYIHEEEEFITEEEVVPVIPVKVPEVPRKPVPEE--KKPV 9965
Query: 332 YIPKKA----ASKTRAPRRRQRKA-------QRPP---APEAPKEIPPE 366
+PKK A P++ + K ++PP PE PK+ PE
Sbjct: 9966 PVPKKKEAPPAKVPEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPE 10014
Score = 30.4 bits (67), Expect = 9.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 334 PKKAASKTRAPRRRQRKAQRPP--APEAPKEIPPE 366
PK+ + + P +K + PP PEAPKE+ PE
Sbjct: 10501 PKEVVPEKKVPVPPAKKPEAPPPKVPEAPKEVVPE 10535
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 47.4 bits (111), Expect = 8e-05
Identities = 57/202 (28%), Positives = 71/202 (35%), Gaps = 28/202 (13%)
Query: 1 MASDGASALPGPDMSMKPSAALSPSPALP-----FLPP--------TSDPPDHPPREPPP 47
MAS A+A+ P S+ A + P+P LP +PP T PP PP PPP
Sbjct: 553 MASLSAAAITVPP-SVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPP 611
Query: 48 ---------QPIMP--SVFSPDNPLMLSAF--PSSLLVTGDGGPCLSGAGAGKVIVKVKT 94
P +P + SP PL A P L G G P S G I
Sbjct: 612 LPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPP 671
Query: 95 EGGSAEPSQTQNFILTQTALNSTAPGTPC-GGLEGPAPPFVTASNVKTILPSKAVGVSQE 153
GSA + + P P G+ P PP + P
Sbjct: 672 LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPP 731
Query: 154 GPPGLPPQPPPPVAQLVPIVPL 175
PPG+ PPPP VP P+
Sbjct: 732 PPPGMGMPPPPPFGFGVPAAPV 753
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 47.4 bits (111), Expect = 8e-05
Identities = 57/202 (28%), Positives = 71/202 (35%), Gaps = 28/202 (13%)
Query: 1 MASDGASALPGPDMSMKPSAALSPSPALP-----FLPP--------TSDPPDHPPREPPP 47
MAS A+A+ P S+ A + P+P LP +PP T PP PP PPP
Sbjct: 562 MASLSAAAITVPP-SVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPP 620
Query: 48 ---------QPIMP--SVFSPDNPLMLSAF--PSSLLVTGDGGPCLSGAGAGKVIVKVKT 94
P +P + SP PL A P L G G P S G I
Sbjct: 621 LPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPP 680
Query: 95 EGGSAEPSQTQNFILTQTALNSTAPGTPC-GGLEGPAPPFVTASNVKTILPSKAVGVSQE 153
GSA + + P P G+ P PP + P
Sbjct: 681 LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPP 740
Query: 154 GPPGLPPQPPPPVAQLVPIVPL 175
PPG+ PPPP VP P+
Sbjct: 741 PPPGMGMPPPPPFGFGVPAAPV 762
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 47.4 bits (111), Expect = 8e-05
Identities = 54/209 (25%), Positives = 75/209 (35%), Gaps = 37/209 (17%)
Query: 10 PGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPSS 69
PG + P L P P P PP S PP H P P + + + P
Sbjct: 712 PGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIP 771
Query: 70 LLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNF----ILTQTALNST---APGTP 122
+V+G G SG VK G + P+ N + +L T APG P
Sbjct: 772 TVVSGARGNAESGD-------SVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPG-P 823
Query: 123 CGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPP--------QPPPPVAQLV---- 170
GL+ P+ +L ++ + + PPG+PP PP P+ +
Sbjct: 824 VIGLQAPS---------TGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRG 874
Query: 171 -PIVPLEKAWPGPHGTTGEGGPVATLSKP 198
P P A P PHG G P +P
Sbjct: 875 PPPGPGGFAMPPPHGMKGPFPPHGPFVRP 903
Score = 33.9 bits (76), Expect = 0.90
Identities = 50/180 (27%), Positives = 60/180 (33%), Gaps = 35/180 (19%)
Query: 10 PGPDMSMKPSAALSPSPALPFLPPTS-DPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPS 68
PGP + AL P PA F PP PP P PPP P P + NP+ L P
Sbjct: 672 PGPPVV----GALQP-PA--FTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHL---PP 721
Query: 69 SLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG-----TPC 123
L G P T S P T + NST G T
Sbjct: 722 GFLPPGPPPPI--------------TPPVSIPPPHTPPISIP----NSTIAGINEDTTKD 763
Query: 124 GGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQ-PPPPVAQLVPIVPLEKAWPGP 182
+ P P V+ + PP P P PPV Q V ++ + PGP
Sbjct: 764 LSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGP 823
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 47.4 bits (111), Expect = 8e-05
Identities = 54/209 (25%), Positives = 75/209 (35%), Gaps = 37/209 (17%)
Query: 10 PGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPSS 69
PG + P L P P P PP S PP H P P + + + P
Sbjct: 727 PGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIP 786
Query: 70 LLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNF----ILTQTALNST---APGTP 122
+V+G G SG VK G + P+ N + +L T APG P
Sbjct: 787 TVVSGARGNAESGD-------SVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPG-P 838
Query: 123 CGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPP--------QPPPPVAQLV---- 170
GL+ P+ +L ++ + + PPG+PP PP P+ +
Sbjct: 839 VIGLQAPS---------TGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRG 889
Query: 171 -PIVPLEKAWPGPHGTTGEGGPVATLSKP 198
P P A P PHG G P +P
Sbjct: 890 PPPGPGGFAMPPPHGMKGPFPPHGPFVRP 918
Score = 33.9 bits (76), Expect = 0.90
Identities = 50/180 (27%), Positives = 60/180 (33%), Gaps = 35/180 (19%)
Query: 10 PGPDMSMKPSAALSPSPALPFLPPTS-DPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPS 68
PGP + AL P PA F PP PP P PPP P P + NP+ L P
Sbjct: 687 PGPPVV----GALQP-PA--FTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHL---PP 736
Query: 69 SLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG-----TPC 123
L G P T S P T + NST G T
Sbjct: 737 GFLPPGPPPPI--------------TPPVSIPPPHTPPISIP----NSTIAGINEDTTKD 778
Query: 124 GGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQ-PPPPVAQLVPIVPLEKAWPGP 182
+ P P V+ + PP P P PPV Q V ++ + PGP
Sbjct: 779 LSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGP 838
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 47.0 bits (110), Expect = 1e-04
Identities = 32/83 (38%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 1 MASDGASALPGPDMSMKPSAAL-----SPSPALPFLPPTSDPPDHPPREPPPQPIMPSVF 55
MAS+ ALP P S+ P L S SPA P P ++ PP PP PPP PS
Sbjct: 637 MASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSA 696
Query: 56 SPDNPLMLSAFPSSLLVTGDGGP 78
P P P+S GGP
Sbjct: 697 GPPPPPPPPPLPNSPAPPNPGGP 719
Score = 33.9 bits (76), Expect = 0.90
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 10 PGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPSS 69
P P + SA P P P LP + PP+ P PPP P P + P P + SS
Sbjct: 686 PPPPLPPPSSAGPPPPPPPPPLPNSPAPPN--PGGPPPAPPPPGLAPPPPPGLFFGLGSS 743
Score = 32.7 bits (73), Expect = 2.0
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 131 PPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPLEKAWPGP 182
PP S + ++ P+ + GPP PP PPPP P+ P A P P
Sbjct: 654 PPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPP-----PLPPPSSAGPPP 700
Score = 31.6 bits (70), Expect = 4.5
Identities = 25/83 (30%), Positives = 28/83 (33%), Gaps = 11/83 (13%)
Query: 119 PGTPCG-GLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPLEK 177
P P G G PAPP +P + G PP PP PPP + P P
Sbjct: 656 PPLPSGLGSLSPAPP----------MPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPP 705
Query: 178 AWPGPHGTTGEGGPVATLSKPSL 200
P GGP P L
Sbjct: 706 PLPNSPAPPNPGGPPPAPPPPGL 728
>gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
isoform a [Homo sapiens]
Length = 1006
Score = 47.0 bits (110), Expect = 1e-04
Identities = 55/193 (28%), Positives = 74/193 (38%), Gaps = 49/193 (25%)
Query: 23 SPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPSSLLVTGDGGPCLSG 82
SP PA P P T+ P PPR + ++ ++L T
Sbjct: 770 SPPPAQPAAPSTTSAPPLPPRNV-------------GKVQTASSANTLWKTNS------- 809
Query: 83 AGAGKVIVKVKTEGGSAEPSQTQ----NFILTQTALNSTAPGTPCGGLEGPAPPFVTASN 138
V +GGS + S + + L + ST P TP P PP +
Sbjct: 810 ---------VSVDGGSRQRSSSDPPAVHPPLPPLRVTSTNPLTPT-----PPPPVAKTPS 855
Query: 139 VKTIL--PSKAV--GVSQEGPPGLPPQPPPPVAQLVPIVPLEKAWPGPHGTTGEG---GP 191
V L PSK G+SQ PP LPPQPP + Q P +K+ P T +G GP
Sbjct: 856 VMEALSQPSKPAPPGISQIRPPPLPPQPPSRLPQKKPAPGADKSTP----LTNKGQPRGP 911
Query: 192 VATLSKPSLGDRS 204
V + +LG S
Sbjct: 912 VDLSATEALGPLS 924
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 47.0 bits (110), Expect = 1e-04
Identities = 60/230 (26%), Positives = 81/230 (35%), Gaps = 38/230 (16%)
Query: 6 ASALPGPDMSMKPS----AALSPSPALPFLPPT-----------------SDPPDHPPRE 44
A+ L GP S PS A L SP LP PT S+PP HP
Sbjct: 765 AAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPP 824
Query: 45 PPPQPIMPSVFSPDNPLMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQT 104
P P +P +F N L + S+ T G P + PS T
Sbjct: 825 PQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSST 884
Query: 105 QNFILTQTALNSTAPGTPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPP 164
+ + + + +S P + PP + K+ P + + E P PP PPP
Sbjct: 885 SSAVASSSETSSRLPAPTPSDFQLQFPP--SQGPHKSPTPPPTLHLVPE--PAAPPPPPP 940
Query: 165 PVAQLV----PIVP-----LEKAWPGPHG----TTGEGGPVATLSKPSLG 201
Q+V P +P LE+ P G G P A + SLG
Sbjct: 941 RTFQMVTTPFPALPQPKALLERFHQVPSGIILQNKAGGAPAAPQTSTSLG 990
Score = 35.8 bits (81), Expect = 0.24
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 39/164 (23%)
Query: 2 ASDGASALPGPDMS---------MKPSAALSPSPALPFLPPTSDPPDHPPRE----PPPQ 48
+S+ +S LP P S P + +P P L +P + PP PPR P
Sbjct: 891 SSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPF 950
Query: 49 PIMPSVFSPDNPLMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNF- 107
P +P P +LL P SG +I++ K G A P + +
Sbjct: 951 PALPQ-------------PKALLERFHQVP--SG-----IILQNKAGGAPAAPQTSTSLG 990
Query: 108 ILTQTA----LNSTAP-GTPCGGLEGPAPPFVTASNVKTILPSK 146
LT A ++ AP GTP PAP + A+ + +LP++
Sbjct: 991 PLTSPAASVLVSGQAPSGTPTAPSHAPAPAPMAATGLPPLLPAE 1034
Score = 33.5 bits (75), Expect = 1.2
Identities = 37/143 (25%), Positives = 53/143 (37%), Gaps = 9/143 (6%)
Query: 295 QIQNTQLMNGSQGLSPATPLKLDPLGPLASEVCQQPVYIPKKAASKT-RAPRRRQRKAQR 353
Q+ + ++ G +PA P LGPL S V + +A S T AP
Sbjct: 965 QVPSGIILQNKAGGAPAAPQTSTSLGPLTSPAAS--VLVSGQAPSGTPTAPSHAP----- 1017
Query: 354 PPAPEAPKEIPPEAVKEYVDIMEWLVGTHLATGESDGKQEEEGQQQEEE-GMYPDPGLLS 412
PAP A +PP E L ++A S G + G Q E + P L
Sbjct: 1018 APAPMAATGLPPLLPAENKAFASNLPTLNVAKAASSGPGKPSGLQYESKLSGLKKPPTLQ 1077
Query: 413 YINELCSQKVFVSKVEAVIHPQF 435
E C + +V+HP +
Sbjct: 1078 PSKEACFLEHLHKHQGSVLHPDY 1100
Score = 32.7 bits (73), Expect = 2.0
Identities = 42/181 (23%), Positives = 63/181 (34%), Gaps = 15/181 (8%)
Query: 5 GASALPGPDMSMKPSAA---LSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPL 61
GA++ P S +P A L SP +P P P +P P ++P P
Sbjct: 311 GAASAPTGTPSGQPLAVAPGLGSSPLVP-APNVILHRTPTPIQPKPAGVLPPKLYQLTPK 369
Query: 62 MLSAFPSSLLVTGDGGPC---------LSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQT 112
+ ++L + G+ G L+ AGK V G A Q F
Sbjct: 370 PFAPAGATLTIQGEPGALPQQPKAPQNLTFMAAGKAGQNVVLSGFPAPALQANVFKQPPA 429
Query: 113 ALNSTAPGTPCGGLEGPAPPFVTASNVKTILPSKAV--GVSQEGPPGLPPQPPPPVAQLV 170
AP P G L P + ++P++ + G +Q PG P P +
Sbjct: 430 TTTGAAPPQPPGALSKPMSVHLLNQGSSIVIPAQHMLPGQNQFLLPGAPAVQLPQQLSAL 489
Query: 171 P 171
P
Sbjct: 490 P 490
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 47.0 bits (110), Expect = 1e-04
Identities = 52/193 (26%), Positives = 68/193 (35%), Gaps = 65/193 (33%)
Query: 1 MASDGASALP--GPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPD 58
+A GA + P G +PSA P P P LPPT PP PP PPP P +
Sbjct: 128 VAHPGAGSYPCGGGSSGAQPSA---PPPPAPPLPPTPSPPPPPP--PPPPPAL------- 175
Query: 59 NPLMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTA 118
S T GG GGS+ +++F+L + L++TA
Sbjct: 176 ---------SGYTTTNSGG------------------GGSSGKGHSRDFVLRRD-LSATA 207
Query: 119 PGTPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPLEKA 178
P G AP +G Q G P P PP +
Sbjct: 208 PAAAMHG----AP----------------LGGEQRSGTGSPQHPAPPPHSAGMFISASGT 247
Query: 179 WPGPHGTTGEGGP 191
+ GP G+ GGP
Sbjct: 248 YAGPDGS---GGP 257
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 46.6 bits (109), Expect = 1e-04
Identities = 99/431 (22%), Positives = 133/431 (30%), Gaps = 100/431 (23%)
Query: 5 GASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLS 64
G PGP +P P+P L P PP+ P P +V + P
Sbjct: 100 GGPQRPGPPSPRRPLVPAGPAPPAAKLRP---PPEGSAGSCAPVPAAAAVAAGPEPAPAG 156
Query: 65 ----AFPSSLLVTGDGGPCLS-GAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAP 119
A P++L GP G G G G A P Q + LNS
Sbjct: 157 PAKPAGPAALAARAGPGPGPGPGPGPGP------GPGKPAGPGAAQTLNGSAALLNSHHA 210
Query: 120 GTPCGGL--EGPA-----------------PPFV-TASNVKTILPSKAVGVSQEGPPGLP 159
P L GPA PPFV A+ PS + P P
Sbjct: 211 AAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAP 270
Query: 160 PQPPPPVAQLV-------------PIVPLEKAWP----------------GPHGTTGEGG 190
P PPP A L P VP A GP G +G+ G
Sbjct: 271 PPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPG 330
Query: 191 PVATLSKPSLGDRSKISKDVYENFRQWQRYKALARRHLSQSPDTEALSCFLIPVLRS--- 247
P A + P+ G +++ K V Q A+ + P + A S + P ++
Sbjct: 331 PGAAAAAPAPGVKAESPKRVV------QAAPPAAQTLAASGPASTAASMVIGPTMQGALP 384
Query: 248 --LARLKPTMTLEEGLP----------LAVQEWEHTSNFDRMIF-YEMAERFMEFEAEEM 294
A P GLP L+ TS + +A R +
Sbjct: 385 SPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNPT 444
Query: 295 QIQNTQLMNGSQGLSPATPLKLDPLGPLASEVCQQPVYIPKKAASKTRAPRRRQRKAQRP 354
IQN QL G L Q + IP++A ++ +A Q +
Sbjct: 445 NIQNFQLPPGM---------------VLVRSENGQLLMIPQQALAQMQAQAHAQPQTTMA 489
Query: 355 PAPEAPKEIPP 365
P P P PP
Sbjct: 490 PRPATPTSAPP 500
Score = 41.6 bits (96), Expect = 0.004
Identities = 47/163 (28%), Positives = 58/163 (35%), Gaps = 18/163 (11%)
Query: 2 ASDGASALPGPDMSMKPSAALSPSPALPFLPPT-SDPPDHPPREPPPQPIMPSVFSPDNP 60
A+ A A P P + P+A + P P P T + PP HP P P +P + N
Sbjct: 247 AAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNG 306
Query: 61 LMLSAFPSSLL-------VTGDGGPCLSGAGAGKVIVKVKTEGG----SAEPSQTQNFIL 109
A P+ V+G GP GA A VK E A P Q
Sbjct: 307 GSAGAAPAPAPAAGGPAGVSGQPGP---GAAAAAPAPGVKAESPKRVVQAAPPAAQTLAA 363
Query: 110 T---QTALNSTAPGTPCGGLEGPAPPFVTASNVKTILPSKAVG 149
+ TA + T G L PA A T LP A G
Sbjct: 364 SGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAG 406
Score = 33.5 bits (75), Expect = 1.2
Identities = 26/90 (28%), Positives = 31/90 (34%), Gaps = 3/90 (3%)
Query: 115 NSTAPGTPCGGL-EGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPP--PVAQLVP 171
N G+P G GPA P A P G P P P P P+ P
Sbjct: 60 NHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGP 119
Query: 172 IVPLEKAWPGPHGTTGEGGPVATLSKPSLG 201
P K P P G+ G PV + + G
Sbjct: 120 APPAAKLRPPPEGSAGSCAPVPAAAAVAAG 149
>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
Length = 1497
Score = 46.6 bits (109), Expect = 1e-04
Identities = 54/204 (26%), Positives = 69/204 (33%), Gaps = 34/204 (16%)
Query: 5 GASALPGP--DMSMKPSAALSPSPALPFLP-------------PTSDPPDHPPREPPPQP 49
G PGP D K L+ P + LP P PR
Sbjct: 701 GPMGPPGPKGDQGEKGPRGLTGEPGMRGLPGAVGEPGAKGAMGPAGPDGHQGPRGEQGLT 760
Query: 50 IMPSVFSPDNPLMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFIL 109
MP + P P S P +TG GP G+ +K EP +
Sbjct: 761 GMPGIRGPPGP---SGDPGKPGLTGPQGPQGLPGTPGRPGIK-------GEPGAPGKIVT 810
Query: 110 TQTALNSTAPGTPC--GGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVA 167
++ + T PG P G + P PP LP ++ +GPPG PP P
Sbjct: 811 SEGSSMLTVPGPPGPPGAMGPPGPPGAPGPAGPAGLPGHQEVLNLQGPPG----PPGPRG 866
Query: 168 QLVPIVPLEKAWPGPHGTTGEGGP 191
P +P PGP G GEG P
Sbjct: 867 PPGPSIP---GPPGPRGPPGEGLP 887
Score = 36.6 bits (83), Expect = 0.14
Identities = 41/146 (28%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 471 LMALEEEEDAEAPPSFSGAQLDSSPSGSVEDEDGDGRLRPSPGLQGAGGAACLGKVSSSG 530
L ++ ++ PP G Q + P G G+ +R PG G GA G + +G
Sbjct: 693 LPGVKGDKGPMGPPGPKGDQGEKGPRGLT----GEPGMRGLPGAVGEPGAK--GAMGPAG 746
Query: 531 KRAREVHGGQEQALDSPRGMHRDGNTLPSPSSWDLQPELAAPQ------GTPGPLGV--E 582
+ G EQ L G+ P PS +P L PQ GTPG G+ E
Sbjct: 747 PDGHQGPRG-EQGLTGMPGIRGP----PGPSGDPGKPGLTGPQGPQGLPGTPGRPGIKGE 801
Query: 583 RRGSGKVINQVSLHQDGHLGGAGPPG 608
GK++ G GPPG
Sbjct: 802 PGAPGKIVTSEGSSMLTVPGPPGPPG 827
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 45.8 bits (107), Expect = 2e-04
Identities = 59/208 (28%), Positives = 74/208 (35%), Gaps = 48/208 (23%)
Query: 1 MASDGASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPP-------REPPPQPIMPS 53
+A+ ALP P S A SPS +LP P + PP PP + PP P P+
Sbjct: 523 LATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPT 582
Query: 54 VFSPDNPLMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTA 113
+ +P P P+ T GP L+ A A G PS+
Sbjct: 583 LQAPRRP------PTPGPDTSVSGPRLTLALA---------PGPPPPPSR---------- 617
Query: 114 LNSTAPGTPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIV 173
+P L G P S+ T P + G GP G PPP A+L
Sbjct: 618 -------SPSSTLSG--PDLAGHSSSATSTPEELRGY-DSGPEGGAAASPPPDAELAACH 667
Query: 174 PLEKAW---PGPHGTTGEGGPVATLSKP 198
P AW P P G P A L P
Sbjct: 668 P--AAWSRGPAP-PLAFRGAPGAPLPWP 692
Score = 42.0 bits (97), Expect = 0.003
Identities = 67/266 (25%), Positives = 89/266 (33%), Gaps = 40/266 (15%)
Query: 8 ALPGPDMSMKPSAALSPSPALP-----------FLPPTSDPPDHPPREPPPQPIMPSVFS 56
A P P S S +PSP P F PP S P P P P+ PS
Sbjct: 407 APPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATP 466
Query: 57 PDN-PLMLSAFPSSLLVTGDGGPCLSGAGA--------------------GKVIVKVKTE 95
P P L+A P + + P +S + + + T
Sbjct: 467 PSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATP 526
Query: 96 GGSAEPSQTQNFILTQTALNSTAPGTPCGGLEGPAP--PFVTASNVKTILPSKAVGVSQE 153
A PS +F A S + P L P P P V A+ + + PS + +
Sbjct: 527 PLQALPSPPASF--PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQ 584
Query: 154 GPPGLPPQPPPPVAQLVPIVPLEKAWPGPHGTTGEGGPVATLSKPSLGDRSKISKDVYEN 213
P PP P P + P + L A PGP P +TLS P L S + E
Sbjct: 585 A-PRRPPTPGPDTSVSGPRLTLALA-PGPPPPPSR-SPSSTLSGPDLAGHSSSATSTPEE 641
Query: 214 FRQWQRYKALARRHLSQSPDTEALSC 239
R + S PD E +C
Sbjct: 642 LRGYDSGPE-GGAAASPPPDAELAAC 666
Score = 34.7 bits (78), Expect = 0.53
Identities = 52/202 (25%), Positives = 72/202 (35%), Gaps = 25/202 (12%)
Query: 3 SDGASALPGPDMSMKPSAALSP-SPALPFLP-PTSDPPDHPPREPPPQPIMPSVFSPDNP 60
S A+ L P S PSA +P +PA P P P PP+ PP+ P +
Sbjct: 243 SSSATPLSSPARS-GPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS 301
Query: 61 LMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
L+ S + P L T S+ Q + T L +P
Sbjct: 302 SPLATPSPSAALQSQAPPTLPA-----------TPHSSSLTCQ----LATPLPLAPPSPS 346
Query: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQE---GPPGLPPQPPPPVAQLVPIVPLEK 177
P P+PP S T L S + + PP P PPP A +P +
Sbjct: 347 APPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQ 406
Query: 178 AWPGPHGTTGEGGPVATLSKPS 199
A P P + P++ L+ PS
Sbjct: 407 APPSPPASP----PLSPLATPS 424
Score = 34.3 bits (77), Expect = 0.69
Identities = 47/181 (25%), Positives = 65/181 (35%), Gaps = 25/181 (13%)
Query: 7 SALPGPDMS--MKPSAALSPSPALPFLPPTSDPPDHPPREP--PPQPIMPSVFSPDNPLM 62
S LP P +S P P+ ALP L PP PP P P P P+ + L+
Sbjct: 379 SFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVH--LL 436
Query: 63 LSAF--PSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNSTAPG 120
+ F P S V P A + T A PS + + ++ P
Sbjct: 437 QAPFSPPPSPPVQAPFSP-----PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPM 491
Query: 121 TPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPLEKAWP 180
+P APP + A ++ P PP PP P Q +P P ++P
Sbjct: 492 SPSATPPPQAPPPLAAPPLQLAKP----------PPQAPPALATPPLQALPSPP--ASFP 539
Query: 181 G 181
G
Sbjct: 540 G 540
Score = 31.6 bits (70), Expect = 4.5
Identities = 50/196 (25%), Positives = 63/196 (32%), Gaps = 41/196 (20%)
Query: 2 ASDGASALPGPDMSMKPSAALS-PSPALPFLPPTSDPPDHPPREPPPQ---PIMPSVFSP 57
AS+ ++ P P +PSA PA L ++ P P R P P P+ S
Sbjct: 212 ASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQ 271
Query: 58 DNPLMLSAF--PSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALN 115
P L A P D P L + + A PS + AL
Sbjct: 272 PKPKGLQALRPPQVTPPRKDAAPALGPLSSSPL----------ATPSPS-------AALQ 314
Query: 116 STAPGTPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPIVPL 175
S AP T PA P ++ + P S PP L P PP
Sbjct: 315 SQAPPTL------PATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPP---------- 358
Query: 176 EKAWPGPHGTTGEGGP 191
A P TT G P
Sbjct: 359 --ATPPSQATTSLGSP 372
Score = 31.2 bits (69), Expect = 5.8
Identities = 44/190 (23%), Positives = 60/190 (31%), Gaps = 33/190 (17%)
Query: 10 PGPDMSMKPSAALS------PSPALPFLPPTSDP-------PDHPPREPPP----QPIMP 52
P P M+ + AA + P+P+ PPT P +H EP P +P
Sbjct: 172 PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAG 231
Query: 53 SVFSPDNPLMLSAFPSSLLVTGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQT 112
LS+ + L GP G T A PSQ +
Sbjct: 232 GGLQRPASRSLSSSATPLSSPARSGPSARG-----------TPRAPAHPSQPK-----PK 275
Query: 113 ALNSTAPGTPCGGLEGPAPPFVTASNVKTILPSKAVGVSQEGPPGLPPQPPPPVAQLVPI 172
L + P + AP S+ PS + + + PP LP P
Sbjct: 276 GLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLA 335
Query: 173 VPLEKAWPGP 182
PL A P P
Sbjct: 336 TPLPLAPPSP 345
Score = 30.8 bits (68), Expect = 7.6
Identities = 39/148 (26%), Positives = 54/148 (36%), Gaps = 26/148 (17%)
Query: 13 DMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMPSVFSPDNPLMLSAFPSSLLV 72
D + +AA +P+ P L T PP P R PPP P++L V
Sbjct: 6 DKAKAGAAARTPAARAPGLL-TPRPPGSP-RPPPP-----------------VTPAALRV 46
Query: 73 TGDGGPCLSGAGAGKVIVKVKTEGGSAEPSQTQNFILTQTALNST---APGTPCGGLEGP 129
G G G + + GG+ P T++A S+ A P G
Sbjct: 47 LGAAG----AVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGER 102
Query: 130 APPFVTASNVKTILPSKAVGVSQEGPPG 157
APP S P +A G ++ GP G
Sbjct: 103 APPAKNTSPGPVSSPGRASGTTRPGPLG 130
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.131 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,034,193
Number of Sequences: 37866
Number of extensions: 3682209
Number of successful extensions: 30701
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 761
Number of HSP's that attempted gapping in prelim test: 19073
Number of HSP's gapped (non-prelim): 8994
length of query: 1132
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1019
effective length of database: 13,968,660
effective search space: 14234064540
effective search space used: 14234064540
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.