Guide to the Human Genome
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Name: INTS4 Sequence: fasta or formatted (963aa) NCBI GI: 50086624
Description:

integrator complex subunit 4

Referenced in:

Polyadenylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         81           3
 C cysteine            1.8         17           2
 D aspartate           5.9         57           2
 E glutamate           6.9         66           2
 F phenylalanine       3.2         31           2
 G glycine             3.8         37           2
 H histidine           3.1         30           2
 I isoleucine          5.0         48           2
 K lysine              5.9         57           2
 L leucine            13.2        127           3
 M methionine          2.6         25           1
 N asparagine          2.2         21           2
 P proline             5.2         50           1
 Q glutamine           5.7         55           2
 R arginine            5.1         49           2
 S serine              7.1         68           2
 T threonine           4.7         45           2
 V valine              7.1         68           2
 W tryptophan          0.7          7           1
 Y tyrosine            2.5         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   integrator complex subunit 4 
CEP350                0.006   centrosome-associated protein 350 
POLG                  0.005   DNA-directed DNA polymerase gamma 
POLG                  0.005   DNA-directed DNA polymerase gamma 
TMCO7                 0.005   transmembrane and coiled-coil domains 7 
STAG3                 0.005   stromal antigen 3 
ODF2L                 0.005   outer dense fiber of sperm tails 2-like isoform b [H...
ODF2L                 0.005   outer dense fiber of sperm tails 2-like isoform a [H...
PIK3R4                0.005   phosphoinositide-3-kinase, regulatory subunit 4 [Hom...
PPP2R1A               0.005   alpha isoform of regulatory subunit A, protein phosp...
TXNDC11               0.004   thioredoxin domain containing 11 
THEM4                 0.004   thioesterase superfamily member 4 
IZUMO1                0.004   izumo sperm-egg fusion 1 
GSDMA                 0.004   gasdermin 1 
EP400                 0.004   E1A binding protein p400 
RAP1GDS1              0.003   RAP1, GTP-GDP dissociation stimulator 1 isoform 5 [...
RAP1GDS1              0.003   RAP1, GTP-GDP dissociation stimulator 1 isoform 4 [...
MYBBP1A               0.003   MYB binding protein 1a isoform 1 
MYBBP1A               0.003   MYB binding protein 1a isoform 2 
C11orf2               0.003   chromosome 11 open reading frame2 
LRRK1                 0.003   leucine-rich repeat kinase 1 
GCN1L1                0.003   GCN1 general control of amino-acid synthesis 1-like ...
COPG2                 0.003   coatomer protein complex, subunit gamma 2 
AP1B1                 0.003   adaptor-related protein complex 1 beta 1 subunit iso...
AP1B1                 0.003   adaptor-related protein complex 1 beta 1 subunit iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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