Guide to the Human Genome
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Name: IZUMO1 Sequence: fasta or formatted (350aa) NCBI GI: 194097475
Description:

izumo sperm-egg fusion 1

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         25           2
 C cysteine            3.7         13           1
 D aspartate           4.9         17           1
 E glutamate           7.7         27           2
 F phenylalanine       3.4         12           1
 G glycine             6.3         22           1
 H histidine           2.3          8           2
 I isoleucine          4.0         14           2
 K lysine              8.0         28           2
 L leucine            11.7         41           2
 M methionine          3.1         11           2
 N asparagine          3.1         11           2
 P proline             4.6         16           1
 Q glutamine           3.7         13           2
 R arginine            3.4         12           3
 S serine              6.9         24           2
 T threonine           5.7         20           2
 V valine              6.6         23           2
 W tryptophan          1.4          5           1
 Y tyrosine            2.3          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   izumo sperm-egg fusion 1 
C19orf41              0.020   hypothetical protein LOC126123 
OBSCN                 0.017   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.017   obscurin, cytoskeletal calmodulin and titin-interac...
OBSL1                 0.017   obscurin-like 1 
TTN                   0.013   titin isoform N2-A 
CD22                  0.012   CD22 molecule 
MXRA5                 0.010   adlican 
INTS4                 0.010   integrator complex subunit 4 
MYBPC3                0.010   myosin binding protein C, cardiac 
KIRREL2               0.010   kin of IRRE-like 2 isoform c 
KIRREL2               0.010   kin of IRRE-like 2 isoform b 
KIRREL2               0.010   kin of IRRE-like 2 isoform a 
AMIGO1                0.010   AMIGO protein 
TTN                   0.009   titin isoform novex-2 
TTN                   0.009   titin isoform novex-1 
TTN                   0.009   titin isoform N2-B 
TEK                   0.009   TEK tyrosine kinase, endothelial precursor 
TREM2                 0.009   triggering receptor expressed on myeloid cells 2 prec...
C19orf36              0.009   hypothetical protein LOC113177 isoform 3 
HSPG2                 0.007   heparan sulfate proteoglycan 2 
MDGA1                 0.007   MAM domain containing glycosylphosphatidylinositol a...
C19orf36              0.007   hypothetical protein LOC113177 isoform 1 
L1CAM                 0.007   L1 cell adhesion molecule isoform 3 precursor [Homo...
L1CAM                 0.007   L1 cell adhesion molecule isoform 2 precursor 
L1CAM                 0.007   L1 cell adhesion molecule isoform 1 precursor 
HMCN1                 0.007   hemicentin 1 
MAG                   0.007   myelin associated glycoprotein isoform a precursor [...
MAG                   0.007   myelin associated glycoprotein isoform b precursor [...
ZNF840                0.006   PREDICTED: zinc finger protein 840 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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