Guide to the Human Genome
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Name: STAG3 Sequence: fasta or formatted (1225aa) NCBI GI: 57863310
Description:

stromal antigen 3

Referenced in:

Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         74           2
 C cysteine            1.9         23           2
 D aspartate           6.3         77           2
 E glutamate           8.2        101           4
 F phenylalanine       4.7         57           2
 G glycine             5.0         61           2
 H histidine           2.9         35           1
 I isoleucine          2.9         36           2
 K lysine              4.6         56           2
 L leucine            13.9        170           3
 M methionine          2.1         26           2
 N asparagine          2.5         31           2
 P proline             4.7         58           2
 Q glutamine           6.2         76           2
 R arginine            6.0         73           3
 S serine              8.9        109           5
 T threonine           4.5         55           2
 V valine              5.3         65           3
 W tryptophan          0.9         11           1
 Y tyrosine            2.5         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   stromal antigen 3 
STAG2                 0.449   stromal antigen 2 isoform b 
STAG2                 0.449   stromal antigen 2 isoform b 
STAG2                 0.448   stromal antigen 2 isoform a 
STAG2                 0.448   stromal antigen 2 isoform a 
STAG1                 0.447   stromal antigen 1 
STAG3L1               0.122   stromal antigen 3-like 1 isoform 1 
STAG3L1               0.085   stromal antigen 3-like 1 isoform 2 
STAG3L2               0.084   STAG3-like 
STAG3L3               0.083   stromal antigen 3-like 3 
STAG3L4               0.076   stromal antigen 3-like 4 
MYST4                 0.006   MYST histone acetyltransferase (monocytic leukemia)...
PPP1R12C              0.005   protein phosphatase 1, regulatory subunit 12C 
C6orf132              0.005   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.005   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.005   PREDICTED: hypothetical protein LOC647024 
KRCC1                 0.005   lysine-rich coiled-coil 1 
NOLC1                 0.004   nucleolar and coiled-body phosphoprotein 1 
NAP5                  0.004   Nck-associated protein 5 isoform 1 
MLL3                  0.004   myeloid/lymphoid or mixed-lineage leukemia 3 
INTS4                 0.004   integrator complex subunit 4 
DMP1                  0.004   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
MUC16                 0.004   mucin 16 
DMP1                  0.004   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
SRCAP                 0.004   Snf2-related CBP activator protein 
CDC2L2                0.003   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.003   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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