Guide to the Human Genome
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Name: TXNDC11 Sequence: fasta or formatted (958aa) NCBI GI: 54633317
Description:

thioredoxin domain containing 11

Referenced in:

Glutathione Pathways
Thyroid and Thyroid Hormone Receptor

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         69           3
 C cysteine            2.5         24           2
 D aspartate           3.7         35           1
 E glutamate           7.2         69           2
 F phenylalanine       5.2         50           2
 G glycine             4.9         47           6
 H histidine           2.9         28           2
 I isoleucine          3.5         34           2
 K lysine              4.0         38           2
 L leucine            12.2        117           3
 M methionine          1.1         11           1
 N asparagine          3.7         35           2
 P proline             6.4         61           3
 Q glutamine           5.0         48           3
 R arginine            5.5         53           2
 S serine              9.6         92           4
 T threonine           4.6         44           2
 V valine              6.5         62           2
 W tryptophan          1.1         11           2
 Y tyrosine            3.1         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin domain containing 11 
PDIA3                 0.020   protein disulfide-isomerase A3 precursor 
PDIA4                 0.019   protein disulfide isomerase A4 
LOC653720             0.013   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC100133220          0.012   PREDICTED: hypothetical protein 
PDILT                 0.012   protein disulfide isomerase-like, testis expressed [...
LOC647042             0.012   PREDICTED: hypothetical protein isoform 1 
LOC653073             0.012   PREDICTED: Golgin subfamily A member 8-like protein...
EPS15                 0.012   epidermal growth factor receptor pathway substrate ...
EPS15                 0.012   epidermal growth factor receptor pathway substrate 15...
LOC728080             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
DNAJC10               0.011   DnaJ (Hsp40) homolog, subfamily C, member 10 
LOC643699             0.011   PREDICTED: similar to golgi autoantigen, golgin sub...
NUMA1                 0.011   nuclear mitotic apparatus protein 1 
HOOK2                 0.011   hook homolog 2 isoform 2 
HOOK2                 0.011   hook homolog 2 isoform 1 
LOC653125             0.010   PREDICTED: similar to Golgin subfamily A member 8-l...
ERC2                  0.010   cytomatrix protein p110 
TMEM57                0.010   transmembrane protein 57 
P4HB                  0.010   prolyl 4-hydroxylase, beta subunit precursor 
MYH7                  0.010   myosin, heavy chain 7, cardiac muscle, beta 
LOC728047             0.010   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.010   PREDICTED: similar to Golgin subfamily A member 8-l...
MYH6                  0.010   myosin heavy chain 6 
MYO18A                0.010   myosin 18A isoform b 
MYO18A                0.010   myosin 18A isoform a 
GOLGA8E               0.010   golgi autoantigen, golgin subfamily a, 8E 
LOC653720             0.010   PREDICTED: similar to Golgin subfamily A member 8-l...
MYH3                  0.010   myosin, heavy chain 3, skeletal muscle, embryonic [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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