| Name: GSDMA | Sequence: fasta or formatted (445aa) | NCBI GI: 150456463 | |
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Description: gasdermin 1
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Referenced in: Stomach, Small Intestine, and Colon
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.8 26 2 C cysteine 1.1 5 1 D aspartate 5.4 24 1 E glutamate 9.0 40 2 F phenylalanine 3.8 17 2 G glycine 6.7 30 1 H histidine 1.3 6 1 I isoleucine 2.0 9 1 K lysine 7.4 33 3 L leucine 15.3 68 2 M methionine 2.2 10 1 N asparagine 2.2 10 1 P proline 4.9 22 2 Q glutamine 5.6 25 2 R arginine 4.0 18 1 S serine 6.3 28 2 T threonine 6.1 27 1 V valine 8.5 38 2 W tryptophan 0.7 3 1 Y tyrosine 1.3 6 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 gasdermin 1 GSDMD 0.202 gasdermin D GSDMC 0.179 melanoma-derived leucine zipper, extra-nuclear facto... GSDMB 0.130 gasdermin-like isoform 1 GSDMB 0.125 gasdermin-like isoform 2 DFNB59 0.045 deafness, autosomal recessive 59 SYCP1 0.019 synaptonemal complex protein 1 GOLGA4 0.014 golgi autoantigen, golgin subfamily a, 4 SPTBN4 0.014 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... AKAP9 0.011 A-kinase anchor protein 9 isoform 2 AKAP9 0.011 A-kinase anchor protein 9 isoform 3 SPTBN4 0.011 spectrin, beta, non-erythrocytic 4 isoform sigma5 [... LOC100131031 0.009 PREDICTED: hypothetical protein LOC100131031 LOC100131031 0.009 PREDICTED: hypothetical protein LOC100131031 LOC100131031 0.009 PREDICTED: hypothetical protein LOC100131031 ABCA13 0.008 ATP binding cassette, sub-family A (ABC1), member 13... SLC12A2 0.008 solute carrier family 12 (sodium/potassium/chloride t... EVI5 0.008 ecotropic viral integration site 5 TPR 0.008 nuclear pore complex-associated protein TPR INTS4 0.008 integrator complex subunit 4 ST13 0.008 heat shock 70kD protein binding protein CCDC146 0.008 coiled-coil domain containing 146 KTN1 0.007 kinectin 1 isoform b KTN1 0.007 kinectin 1 isoform a KTN1 0.007 kinectin 1 isoform c KTN1 0.007 kinectin 1 isoform a PDE4DIP 0.007 phosphodiesterase 4D interacting protein isoform 1 ... MED4 0.007 mediator complex subunit 4 EXOSC2 0.007 exosome component 2 WDFY3 0.007 WD repeat and FYVE domain containing 3 isoform 1 [Ho...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
