Guide to the Human Genome
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Name: UTP14C Sequence: fasta or formatted (766aa) NCBI GI: 51871374
Description:

UTP14, U3 small nucleolar ribonucleoprotein, homolog C

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         59           3
 C cysteine            0.3          2           1
 D aspartate           3.4         26           2
 E glutamate          13.4        103           4
 F phenylalanine       2.0         15           1
 G glycine             3.4         26           2
 H histidine           2.2         17           2
 I isoleucine          3.8         29           2
 K lysine             10.7         82           2
 L leucine             9.7         74           3
 M methionine          1.7         13           2
 N asparagine          3.9         30           2
 P proline             6.0         46           2
 Q glutamine           7.0         54           2
 R arginine            5.7         44           2
 S serine              7.4         57           3
 T threonine           3.9         30           2
 V valine              5.9         45           2
 W tryptophan          0.9          7           1
 Y tyrosine            0.9          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UTP14, U3 small nucleolar ribonucleoprotein, homolog... 
UTP14A                0.901   UTP14, U3 small nucleolar ribonucleoprotein, homolog...
WDR87                 0.037   NYD-SP11 protein 
CENPE                 0.029   centromere protein E 
TRDN                  0.028   triadin 
LOC283767             0.027   golgi autoantigen, golgin subfamily a-like 
TCHH                  0.027   trichohyalin 
NEFH                  0.027   neurofilament, heavy polypeptide 200kDa 
FYCO1                 0.026   FYVE and coiled-coil domain containing 1 
PPL                   0.026   periplakin 
ITSN1                 0.025   intersectin 1 isoform ITSN-s 
ITSN1                 0.025   intersectin 1 isoform ITSN-l 
MYH10                 0.024   myosin, heavy polypeptide 10, non-muscle 
LOC727832             0.024   golgi autoantigen, golgin subfamily a-like 
MYH14                 0.024   myosin, heavy chain 14 isoform 1 
MYH14                 0.024   myosin, heavy chain 14 isoform 2 
MYH14                 0.024   myosin, heavy chain 14 isoform 3 
LOC440243             0.023   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC283685             0.023   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283685             0.023   PREDICTED: golgi autoantigen, golgin subfamily a-li...
NEFM                  0.023   neurofilament, medium polypeptide 150kDa isoform 1 ...
CALD1                 0.022   caldesmon 1 isoform 1 
PLEC1                 0.022   plectin 1 isoform 11 
PLEC1                 0.022   plectin 1 isoform 10 
PLEC1                 0.022   plectin 1 isoform 8 
PLEC1                 0.022   plectin 1 isoform 7 
PLEC1                 0.022   plectin 1 isoform 6 
PLEC1                 0.022   plectin 1 isoform 3 
PLEC1                 0.022   plectin 1 isoform 2 
PLEC1                 0.022   plectin 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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