C10orf71 31327

Name: C10orf71	Sequence: fasta or formatted (719aa)		NCBI GI: 49574498
Description: hypothetical protein LOC118461 isoform 2		Not currently referenced in the text
Other entries for this name: alt prot {1435aa} hypothetical protein LOC118461 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 44 2 C cysteine 1.8 13 1 D aspartate 4.6 33 2 E glutamate 8.1 58 2 F phenylalanine 2.9 21 1 G glycine 5.4 39 2 H histidine 3.8 27 2 I isoleucine 1.9 14 2 K lysine 7.0 50 2 L leucine 7.0 50 2 M methionine 0.7 5 2 N asparagine 4.0 29 2 P proline 10.3 74 3 Q glutamine 5.3 38 2 R arginine 5.6 40 2 S serine 11.8 85 3 T threonine 6.8 49 2 V valine 4.3 31 1 W tryptophan 0.8 6 1 Y tyrosine 1.8 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC118461 isoform 2 C10orf71 0.960 hypothetical protein LOC118461 isoform 1 NEFH 0.021 neurofilament, heavy polypeptide 200kDa AFF1 0.021 myeloid/lymphoid or mixed-lineage leukemia trithorax ... LOC100294236 0.016 PREDICTED: similar to diffuse panbronchiolitis crit... DPCR1 0.015 diffuse panbronchiolitis critical region 1 protein ... LOC100293262 0.014 PREDICTED: similar to Protein FAM27D1 LOC100289697 0.014 PREDICTED: hypothetical protein XP_002346920 SRRM2 0.014 splicing coactivator subunit SRm300 LOC100287633 0.013 PREDICTED: hypothetical protein XP_002342769 LOC100287633 0.013 PREDICTED: similar to Protein FAM27D1 SRRM1 0.012 serine/arginine repetitive matrix 1 LOC285556 0.012 PREDICTED: hypothetical protein LOC285556 LOC285556 0.012 PREDICTED: hypothetical protein LOC285556 LOC285556 0.012 PREDICTED: hypothetical protein LOC285556 LOC100288229 0.012 PREDICTED: hypothetical protein XP_002343606 AFF4 0.012 ALL1 fused gene from 5q31 SPEN 0.011 spen homolog, transcriptional regulator LRRC37A3 0.011 leucine rich repeat containing 37, member A3 PRG4 0.011 proteoglycan 4 isoform D PRG4 0.011 proteoglycan 4 isoform C LOC100133714 0.011 PREDICTED: similar to Mucin-12, partial LOC100292121 0.010 PREDICTED: similar to Protein FAM27D1 MUC12 0.010 PREDICTED: mucin 12 FBRSL1 0.010 fibrosin-like 1 C2orf55 0.010 hypothetical protein LOC343990 ARHGAP17 0.010 nadrin isoform 2 PRG4 0.009 proteoglycan 4 isoform B PRG4 0.009 proteoglycan 4 isoform A TGOLN2 0.009 trans-golgi network protein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.