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Search of human proteins with 49574216
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|49574216 protein kinase NYD-SP25 isoform 3 [Homo sapiens]
(132 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|49574216 protein kinase NYD-SP25 isoform 3 [Homo sapiens] 258 7e-70
gi|49574214 protein kinase NYD-SP25 isoform 1 [Homo sapiens] 240 3e-64
gi|49574212 protein kinase NYD-SP25 isoform 2 [Homo sapiens] 240 3e-64
gi|40805862 tumor protein D52-like 2 isoform f [Homo sapiens] 131 2e-31
gi|40805860 tumor protein D52-like 2 isoform e [Homo sapiens] 125 7e-30
gi|40805870 tumor protein D52-like 2 isoform d [Homo sapiens] 122 1e-28
gi|40805866 tumor protein D52-like 2 isoform b [Homo sapiens] 120 2e-28
gi|40805868 tumor protein D52-like 2 isoform c [Homo sapiens] 116 4e-27
gi|40805864 tumor protein D52-like 2 isoform a [Homo sapiens] 115 1e-26
gi|4827038 tumor protein D52 isoform 3 [Homo sapiens] 99 1e-21
gi|70608172 tumor protein D52 isoform 1 [Homo sapiens] 99 1e-21
gi|70608174 tumor protein D52 isoform 2 [Homo sapiens] 92 2e-19
gi|51173744 tumor protein D52-like 1 isoform 2 [Homo sapiens] 86 1e-17
gi|51173748 tumor protein D52-like 1 isoform 4 [Homo sapiens] 86 1e-17
gi|4507641 tumor protein D52-like 1 isoform 1 [Homo sapiens] 86 1e-17
gi|51173746 tumor protein D52-like 1 isoform 3 [Homo sapiens] 85 2e-17
gi|84993742 tripartite motif-containing 71 [Homo sapiens] 35 0.017
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 33 0.065
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 33 0.065
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 32 0.15
gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens] 30 0.55
gi|209915617 G kinase anchoring protein 1 isoform b [Homo sapiens] 30 0.55
gi|157502225 Janus kinase and microtubule interacting protein 3 ... 30 0.72
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 29 0.94
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 29 0.94
gi|29789058 WW and C2 domain containing 1 isoform 3 [Homo sapiens] 29 1.2
gi|242247257 WW and C2 domain containing 1 isoform 2 [Homo sapiens] 29 1.2
gi|242247251 WW and C2 domain containing 1 isoform 1 [Homo sapiens] 29 1.2
gi|40255245 G protein-coupled receptor 51 [Homo sapiens] 29 1.2
gi|239753712 PREDICTED: hypothetical protein [Homo sapiens] 28 1.6
>gi|49574216 protein kinase NYD-SP25 isoform 3 [Homo sapiens]
Length = 132
Score = 258 bits (660), Expect = 7e-70
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MPHARTETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGEL 60
MPHARTETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGEL
Sbjct: 1 MPHARTETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGEL 60
Query: 61 KRKLGLTALVGLRQNLSKSWLDVQVSNTYVKQKTSAALSTMGTLICRKLGGVKKSATLRS 120
KRKLGLTALVGLRQNLSKSWLDVQVSNTYVKQKTSAALSTMGTLICRKLGGVKKSATLRS
Sbjct: 61 KRKLGLTALVGLRQNLSKSWLDVQVSNTYVKQKTSAALSTMGTLICRKLGGVKKSATLRS 120
Query: 121 FEGNPKGEGSRI 132
FEGNPKGEGSRI
Sbjct: 121 FEGNPKGEGSRI 132
>gi|49574214 protein kinase NYD-SP25 isoform 1 [Homo sapiens]
Length = 140
Score = 240 bits (612), Expect = 3e-64
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MPHARTETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGEL 60
MPHARTETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGEL
Sbjct: 1 MPHARTETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGEL 60
Query: 61 KRKLGLTALVGLRQNLSKSWLDVQVSNTYVKQKTSAALSTMGTLICRKLGGVKKSATLRS 120
KRKLGLTALVGLRQNLSKSWLDVQVSNTYVKQKTSAALSTMGTLICRKLGGVKKSATLRS
Sbjct: 61 KRKLGLTALVGLRQNLSKSWLDVQVSNTYVKQKTSAALSTMGTLICRKLGGVKKSATLRS 120
Query: 121 FEG 123
FEG
Sbjct: 121 FEG 123
>gi|49574212 protein kinase NYD-SP25 isoform 2 [Homo sapiens]
Length = 136
Score = 240 bits (612), Expect = 3e-64
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MPHARTETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGEL 60
MPHARTETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGEL
Sbjct: 1 MPHARTETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGEL 60
Query: 61 KRKLGLTALVGLRQNLSKSWLDVQVSNTYVKQKTSAALSTMGTLICRKLGGVKKSATLRS 120
KRKLGLTALVGLRQNLSKSWLDVQVSNTYVKQKTSAALSTMGTLICRKLGGVKKSATLRS
Sbjct: 61 KRKLGLTALVGLRQNLSKSWLDVQVSNTYVKQKTSAALSTMGTLICRKLGGVKKSATLRS 120
Query: 121 FEG 123
FEG
Sbjct: 121 FEG 123
>gi|40805862 tumor protein D52-like 2 isoform f [Homo sapiens]
Length = 186
Score = 131 bits (329), Expect = 2e-31
Identities = 73/126 (57%), Positives = 90/126 (71%), Gaps = 9/126 (7%)
Query: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
Query: 66 LTALVGLRQNLSKSWLDVQVSNTYVK---------QKTSAALSTMGTLICRKLGGVKKSA 116
L+ L L+QNLS+SW DVQVS+ Y K QKTSAALST+G+ I RKLG ++ SA
Sbjct: 83 LSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSA 142
Query: 117 TLRSFE 122
T +SFE
Sbjct: 143 TFKSFE 148
>gi|40805860 tumor protein D52-like 2 isoform e [Homo sapiens]
Length = 206
Score = 125 bits (315), Expect = 7e-30
Identities = 74/146 (50%), Positives = 91/146 (62%), Gaps = 29/146 (19%)
Query: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
Query: 66 LTALVGLRQNLSKSWLDVQVSNTYVK-----------------------------QKTSA 96
L+ L L+QNLS+SW DVQVS+ YVK QKTSA
Sbjct: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSA 142
Query: 97 ALSTMGTLICRKLGGVKKSATLRSFE 122
ALST+G+ I RKLG ++ SAT +SFE
Sbjct: 143 ALSTVGSAISRKLGDMRNSATFKSFE 168
>gi|40805870 tumor protein D52-like 2 isoform d [Homo sapiens]
Length = 200
Score = 122 bits (305), Expect = 1e-28
Identities = 73/140 (52%), Positives = 90/140 (64%), Gaps = 23/140 (16%)
Query: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
Query: 66 LTALVGLRQNLSKSWLDVQVSNTYVK---------QKTSAALSTMGTLICRKLG------ 110
L+ L L+QNLS+SW DVQVS+ Y K QKTSAALST+G+ I RKLG
Sbjct: 83 LSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMSSYS 142
Query: 111 --------GVKKSATLRSFE 122
++ SAT +SFE
Sbjct: 143 IRHSISMPAMRNSATFKSFE 162
>gi|40805866 tumor protein D52-like 2 isoform b [Homo sapiens]
Length = 209
Score = 120 bits (302), Expect = 2e-28
Identities = 69/125 (55%), Positives = 85/125 (68%), Gaps = 9/125 (7%)
Query: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
Query: 66 LTALVGLRQNLSKSWLDVQVSNTYVK---------QKTSAALSTMGTLICRKLGGVKKSA 116
L+ L L+QNLS+SW DVQVS+ Y K QKTSAALST+G+ I RKLG ++
Sbjct: 83 LSTLGELKQNLSRSWHDVQVSSAYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRAHP 142
Query: 117 TLRSF 121
SF
Sbjct: 143 FSHSF 147
>gi|40805868 tumor protein D52-like 2 isoform c [Homo sapiens]
Length = 220
Score = 116 bits (291), Expect = 4e-27
Identities = 74/160 (46%), Positives = 91/160 (56%), Gaps = 43/160 (26%)
Query: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
Query: 66 LTALVGLRQNLSKSWLDVQVSNTYVK-----------------------------QKTSA 96
L+ L L+QNLS+SW DVQVS+ YVK QKTSA
Sbjct: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSA 142
Query: 97 ALSTMGTLICRKLG--------------GVKKSATLRSFE 122
ALST+G+ I RKLG ++ SAT +SFE
Sbjct: 143 ALSTVGSAISRKLGDMSSYSIRHSISMPAMRNSATFKSFE 182
>gi|40805864 tumor protein D52-like 2 isoform a [Homo sapiens]
Length = 229
Score = 115 bits (288), Expect = 1e-26
Identities = 70/145 (48%), Positives = 86/145 (59%), Gaps = 29/145 (20%)
Query: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG 65
T+ V T + T +E LTE E+ EL+ +LTK+E EIVTLR VLAAKER CGELKR+LG
Sbjct: 23 TDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLG 82
Query: 66 LTALVGLRQNLSKSWLDVQVSNTYVK-----------------------------QKTSA 96
L+ L L+QNLS+SW DVQVS+ YVK QKTSA
Sbjct: 83 LSTLGELKQNLSRSWHDVQVSSAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSA 142
Query: 97 ALSTMGTLICRKLGGVKKSATLRSF 121
ALST+G+ I RKLG ++ SF
Sbjct: 143 ALSTVGSAISRKLGDMRAHPFSHSF 167
>gi|4827038 tumor protein D52 isoform 3 [Homo sapiens]
Length = 184
Score = 98.6 bits (244), Expect = 1e-21
Identities = 55/123 (44%), Positives = 77/123 (62%), Gaps = 9/123 (7%)
Query: 19 SELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLGLTALVGLRQNLSK 78
S E L+E EQ EL+ +L K+E EI TL VLAAKE+ E+KRKLG+ +L L+QN++K
Sbjct: 26 SATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAK 85
Query: 79 SWLDVQVSNTYVK---------QKTSAALSTMGTLICRKLGGVKKSATLRSFEGNPKGEG 129
W DV ++ Y K QK SAA S++G++I +KL VK S T +SFE +
Sbjct: 86 GWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFKSFEEKVENLK 145
Query: 130 SRI 132
S++
Sbjct: 146 SKV 148
>gi|70608172 tumor protein D52 isoform 1 [Homo sapiens]
Length = 224
Score = 98.6 bits (244), Expect = 1e-21
Identities = 55/123 (44%), Positives = 77/123 (62%), Gaps = 9/123 (7%)
Query: 19 SELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLGLTALVGLRQNLSK 78
S E L+E EQ EL+ +L K+E EI TL VLAAKE+ E+KRKLG+ +L L+QN++K
Sbjct: 66 SATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAK 125
Query: 79 SWLDVQVSNTYVK---------QKTSAALSTMGTLICRKLGGVKKSATLRSFEGNPKGEG 129
W DV ++ Y K QK SAA S++G++I +KL VK S T +SFE +
Sbjct: 126 GWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFKSFEEKVENLK 185
Query: 130 SRI 132
S++
Sbjct: 186 SKV 188
>gi|70608174 tumor protein D52 isoform 2 [Homo sapiens]
Length = 207
Score = 91.7 bits (226), Expect = 2e-19
Identities = 52/112 (46%), Positives = 70/112 (62%), Gaps = 9/112 (8%)
Query: 19 SELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLGLTALVGLRQNLSK 78
S E L+E EQ EL+ +L K+E EI TL VLAAKE+ E+KRKLG+ +L L+QN++K
Sbjct: 26 SATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAK 85
Query: 79 SWLDVQVSNTYVK---------QKTSAALSTMGTLICRKLGGVKKSATLRSF 121
W DV ++ Y K QK SAA S++G++I +KL VK A SF
Sbjct: 86 GWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKLQAFSHSF 137
>gi|51173744 tumor protein D52-like 1 isoform 2 [Homo sapiens]
Length = 175
Score = 85.5 bits (210), Expect = 1e-17
Identities = 51/121 (42%), Positives = 69/121 (57%), Gaps = 22/121 (18%)
Query: 24 LTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLGLTALVGLRQNLSKSWLDV 83
L+E E+ ELK +L +LE EI TLR VL+AKER E+K+KLG+ + L+QN SKSW D+
Sbjct: 2 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 61
Query: 84 QVSNTYVK---------QKTSAALSTMGTLICRKLG-------------GVKKSATLRSF 121
Q + Y K QK +AA S +GT I +K G ++ S T +SF
Sbjct: 62 QTTTAYKKTHETLSHAGQKATAAFSNVGTAISKKFGDMSYSIRHSISMPAMRNSPTFKSF 121
Query: 122 E 122
E
Sbjct: 122 E 122
>gi|51173748 tumor protein D52-like 1 isoform 4 [Homo sapiens]
Length = 131
Score = 85.5 bits (210), Expect = 1e-17
Identities = 46/100 (46%), Positives = 64/100 (64%), Gaps = 9/100 (9%)
Query: 24 LTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLGLTALVGLRQNLSKSWLDV 83
L+E E+ ELK +L +LE EI TLR VL+AKER E+K+KLG+ + L+QN SKSW D+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 84 QVSNTYVK---------QKTSAALSTMGTLICRKLGGVKK 114
Q + Y K QK +AA S +GT I +K G +++
Sbjct: 91 QTTTAYKKTHETLSHAGQKATAAFSNVGTAISKKFGDMRR 130
>gi|4507641 tumor protein D52-like 1 isoform 1 [Homo sapiens]
Length = 204
Score = 85.5 bits (210), Expect = 1e-17
Identities = 51/121 (42%), Positives = 69/121 (57%), Gaps = 22/121 (18%)
Query: 24 LTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLGLTALVGLRQNLSKSWLDV 83
L+E E+ ELK +L +LE EI TLR VL+AKER E+K+KLG+ + L+QN SKSW D+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 84 QVSNTYVK---------QKTSAALSTMGTLICRKLG-------------GVKKSATLRSF 121
Q + Y K QK +AA S +GT I +K G ++ S T +SF
Sbjct: 91 QTTTAYKKTHETLSHAGQKATAAFSNVGTAISKKFGDMSYSIRHSISMPAMRNSPTFKSF 150
Query: 122 E 122
E
Sbjct: 151 E 151
>gi|51173746 tumor protein D52-like 1 isoform 3 [Homo sapiens]
Length = 144
Score = 84.7 bits (208), Expect = 2e-17
Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 9/101 (8%)
Query: 24 LTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLGLTALVGLRQNLSKSWLDV 83
L+E E+ ELK +L +LE EI TLR VL+AKER E+K+KLG+ + L+QN SKSW D+
Sbjct: 31 LSEEEKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDM 90
Query: 84 QVSNTYVK---------QKTSAALSTMGTLICRKLGGVKKS 115
Q + Y K QK +AA S +GT I +K G + S
Sbjct: 91 QTTTAYKKTHETLSHAGQKATAAFSNVGTAISKKFGDMSYS 131
>gi|84993742 tripartite motif-containing 71 [Homo sapiens]
Length = 868
Score = 35.0 bits (79), Expect = 0.017
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 25 TEPEQRELKTKLTKLEAEIVTLRHVLAAKERRC---------GELKRKLGLTALVGLRQN 75
T EQ E+K K+ + E + VT RH A +ER C ++K K + LRQN
Sbjct: 348 TVAEQVEMKAKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQN 407
Query: 76 LSK 78
L+K
Sbjct: 408 LNK 410
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 33.1 bits (74), Expect = 0.065
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 12 TYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKR 62
T+ +H+ L+D T+ + +L+ L LE ++ + +++E++ GELKR
Sbjct: 134 THRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKR 184
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 33.1 bits (74), Expect = 0.065
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 12 TYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKR 62
T+ +H+ L+D T+ + +L+ L LE ++ + +++E++ GELKR
Sbjct: 134 THRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKR 184
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 32.0 bits (71), Expect = 0.15
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 9 SVGTYESHSTSELEDLTEPEQREL-------KTKLTKLEAEIVTLRHV-LAAKERRCGEL 60
+V E++ ++E LTE +REL + KL + E+ + + L KE+ EL
Sbjct: 1017 AVSRLETNQKEQIESLTEVHRRELNDVISIWEKKLNQQAEELQEIHEIQLQEKEQEVAEL 1076
Query: 61 KRKLGLTALVGLRQNLSKSWL 81
K+K+ L N +WL
Sbjct: 1077 KQKILLFGCEKEEMNKEITWL 1097
>gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]
Length = 4857
Score = 30.0 bits (66), Expect = 0.55
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 9 SVGTYESHSTSELEDLTEPEQRELK------------TKLTKLEAEIVTLRHVLAAKERR 56
SV +ES + + + +PEQR + T++ LE E + ++H+ ++
Sbjct: 797 SVIQHESPADVQTPLIIQPEQRNVSGGYLVLYKMNYATRIVTLEEEPIKIQHIKDPQDTI 856
Query: 57 CGELKRKLGLTALVGLRQNLSKSWLDVQVS--NTYVKQKTSAALSTMGTLICRKLGGVKK 114
+ L L + + D+Q++ N + ++KTS +ST+G L+ GG K
Sbjct: 857 TSLIL--LPPDILDNREDDCEEPIEDMQLTSKNGFEREKTSD-ISTLGHLVITTQGGYVK 913
Query: 115 SATLRSFE-----GNPKGEGS 130
L +FE PK EG+
Sbjct: 914 ILDLSNFEILAKVEPPKKEGT 934
>gi|209915617 G kinase anchoring protein 1 isoform b [Homo sapiens]
Length = 315
Score = 30.0 bits (66), Expect = 0.55
Identities = 28/120 (23%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 14 ESHSTSELEDLTEPEQR--ELKTKLTKLEAEIVTLRHVLAAKERRCGELK-RKLGLTALV 70
E H + + E++ + R LK +L + +AEI L++V+ E + E+K R L ++
Sbjct: 187 EDHISKKTEEVVLKDGRIERLKLELERKDAEIQKLKNVITQWEAKYKEVKARNAQLLKML 246
Query: 71 GLRQNLSKSWLDVQVSNTY-VKQKTSAALSTMGTLICRKLGGVK-KSATLRSFEGNPKGE 128
+ K+ + +QV + +K + + ++++ + ++ VK A L ++G KG+
Sbjct: 247 QEGEMKDKAEILLQVDESQSIKNELTIQVTSLHAALEQERSKVKVLQAELAKYQGGRKGK 306
>gi|157502225 Janus kinase and microtubule interacting protein 3
[Homo sapiens]
Length = 844
Score = 29.6 bits (65), Expect = 0.72
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 19 SELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLGLTALVGLRQNLSK 78
+E+ + Q E+ + E EI L + K+R L+R+LG+ A R L K
Sbjct: 184 AEIRSVYHLHQEEITRIKKECEREIRRLMEEIKFKDRAVFVLERELGVQAGHAQRLQLQK 243
Query: 79 SWLDVQVS 86
LD Q+S
Sbjct: 244 EALDEQLS 251
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 29.3 bits (64), Expect = 0.94
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 18/85 (21%)
Query: 15 SHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG-----LTAL 69
S S LE + P ++ E EI+ L+ + +++ ELK+K G + AL
Sbjct: 780 SKDVSRLETVFVPPEKH--------EKEIIALKSNIVELKKQLSELKKKCGEDQEKIHAL 831
Query: 70 VGLRQNLSKSWLDVQVSNTYVKQKT 94
NL K +SN YV KT
Sbjct: 832 TSENTNLKK-----MMSNQYVPVKT 851
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 29.3 bits (64), Expect = 0.94
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 18/85 (21%)
Query: 15 SHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKRKLG-----LTAL 69
S S LE + P ++ E EI+ L+ + +++ ELK+K G + AL
Sbjct: 793 SKDVSRLETVFVPPEKH--------EKEIIALKSNIVELKKQLSELKKKCGEDQEKIHAL 844
Query: 70 VGLRQNLSKSWLDVQVSNTYVKQKT 94
NL K +SN YV KT
Sbjct: 845 TSENTNLKK-----MMSNQYVPVKT 864
>gi|29789058 WW and C2 domain containing 1 isoform 3 [Homo sapiens]
Length = 1113
Score = 28.9 bits (63), Expect = 1.2
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKR 62
++ S+ + S S+ ++ + E K+++ KL+ E+V L+H L KER LK+
Sbjct: 141 SQVSLVSGSSSSSKYDPEILKAEIATAKSRVNKLKREMVHLQHELQFKERGFQTLKK 197
>gi|242247257 WW and C2 domain containing 1 isoform 2 [Homo sapiens]
Length = 1118
Score = 28.9 bits (63), Expect = 1.2
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKR 62
++ S+ + S S+ ++ + E K+++ KL+ E+V L+H L KER LK+
Sbjct: 141 SQVSLVSGSSSSSKYDPEILKAEIATAKSRVNKLKREMVHLQHELQFKERGFQTLKK 197
>gi|242247251 WW and C2 domain containing 1 isoform 1 [Homo sapiens]
Length = 1119
Score = 28.9 bits (63), Expect = 1.2
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 6 TETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEIVTLRHVLAAKERRCGELKR 62
++ S+ + S S+ ++ + E K+++ KL+ E+V L+H L KER LK+
Sbjct: 141 SQVSLVSGSSSSSKYDPEILKAEIATAKSRVNKLKREMVHLQHELQFKERGFQTLKK 197
>gi|40255245 G protein-coupled receptor 51 [Homo sapiens]
Length = 941
Score = 28.9 bits (63), Expect = 1.2
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 4 ARTETSVGTYESHSTSELEDLTEPEQRELKTKLTKLEAEI 43
++T TSV + STS LE L + E L+ K+T+L+ ++
Sbjct: 771 SKTSTSVTSVNQASTSRLEGL-QSENHRLRMKITELDKDL 809
>gi|239753712 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 28.5 bits (62), Expect = 1.6
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 67 TALVGLRQNLSKSWLDVQVSNTYVKQKT--SAALSTMGTLICRKLGGVKKSATLRSFEGN 124
TA++ + N K W + + +Y +K AA G ++C +G VK++ + + EG
Sbjct: 52 TAVILFQPNEDKCWQEHLQATSYDARKEPHEAAEVVFGGILCFPIGKVKQNISRDAQEGE 111
Query: 125 P 125
P
Sbjct: 112 P 112
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.126 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,371,901
Number of Sequences: 37866
Number of extensions: 146509
Number of successful extensions: 697
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 617
Number of HSP's gapped (non-prelim): 100
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.