Guide to the Human Genome
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Name: TPD52L2 Sequence: fasta or formatted (200aa) NCBI GI: 40805870
Description:

tumor protein D52-like 2 isoform d

Referenced in:

B cells

Other entries for this name:
alt prot [206aa] tumor protein D52-like 2 isoform e
alt prot [186aa] tumor protein D52-like 2 isoform f
alt prot [229aa] tumor protein D52-like 2 isoform a
alt prot [209aa] tumor protein D52-like 2 isoform b
alt prot [220aa] tumor protein D52-like 2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         17           2
 C cysteine            0.5          1           1
 D aspartate           6.0         12           1
 E glutamate           8.0         16           4
 F phenylalanine       1.5          3           1
 G glycine             7.5         15           1
 H histidine           1.5          3           1
 I isoleucine          3.0          6           1
 K lysine              6.5         13           2
 L leucine             9.5         19           2
 M methionine          2.5          5           1
 N asparagine          3.5          7           1
 P proline             4.0          8           1
 Q glutamine           3.5          7           1
 R arginine            6.0         12           2
 S serine             13.5         27           2
 T threonine           6.5         13           1
 V valine              6.5         13           2
 W tryptophan          0.5          1           1
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor protein D52-like 2 isoform d 
TPD52L2               0.978   tumor protein D52-like 2 isoform b 
TPD52L2               0.967   tumor protein D52-like 2 isoform c 
TPD52L2               0.945   tumor protein D52-like 2 isoform a 
TPD52L2               0.901   tumor protein D52-like 2 isoform f 
TPD52L2               0.867   tumor protein D52-like 2 isoform e 
TPD52                 0.439   tumor protein D52 isoform 2 
TPD52L1               0.434   tumor protein D52-like 1 isoform 2 
TPD52L1               0.434   tumor protein D52-like 1 isoform 1 
TPD52                 0.376   tumor protein D52 isoform 3 
TPD52                 0.376   tumor protein D52 isoform 1 
TPD52L1               0.359   tumor protein D52-like 1 isoform 3 
TPD52L3               0.304   protein kinase NYD-SP25 isoform 1 
TPD52L1               0.298   tumor protein D52-like 1 isoform 4 
TPD52L3               0.268   protein kinase NYD-SP25 isoform 3 
TPD52L3               0.268   protein kinase NYD-SP25 isoform 2 
DCTN1                 0.036   dynactin 1 isoform 4 
DCTN1                 0.036   dynactin 1 isoform 3 
DCTN1                 0.036   dynactin 1 isoform 2 
DCTN1                 0.036   dynactin 1 isoform 1 
LUZP2                 0.028   leucine zipper protein 2 
GOLGB1                0.022   golgi autoantigen, golgin subfamily b, macrogolgin ...
MYH8                  0.022   myosin, heavy chain 8, skeletal muscle, perinatal [...
NPTX1                 0.022   neuronal pentraxin I precursor 
LOC100130363          0.022   PREDICTED: hypothetical protein 
LOC100130363          0.022   PREDICTED: hypothetical protein 
LOC100130363          0.022   PREDICTED: hypothetical protein 
NPTX2                 0.019   neuronal pentraxin II 
TIMM44                0.019   translocase of inner mitochondrial membrane 44 [Homo...
MSN                   0.019   moesin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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