Guide to the Human Genome
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Name: TPD52L2 Sequence: fasta or formatted (186aa) NCBI GI: 40805862
Description:

tumor protein D52-like 2 isoform f

Referenced in:

B cells

Other entries for this name:
alt prot [206aa] tumor protein D52-like 2 isoform e
alt prot [229aa] tumor protein D52-like 2 isoform a
alt prot [209aa] tumor protein D52-like 2 isoform b
alt prot [220aa] tumor protein D52-like 2 isoform c
alt prot [200aa] tumor protein D52-like 2 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         16           2
 C cysteine            0.5          1           1
 D aspartate           6.5         12           1
 E glutamate           8.6         16           4
 F phenylalanine       1.6          3           1
 G glycine             8.1         15           1
 H histidine           1.1          2           1
 I isoleucine          2.2          4           1
 K lysine              7.0         13           2
 L leucine            10.2         19           2
 M methionine          1.6          3           1
 N asparagine          3.8          7           1
 P proline             3.8          7           1
 Q glutamine           3.8          7           1
 R arginine            5.9         11           2
 S serine             11.8         22           2
 T threonine           7.0         13           1
 V valine              7.0         13           2
 W tryptophan          0.5          1           1
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor protein D52-like 2 isoform f 
TPD52L2               0.973   tumor protein D52-like 2 isoform d 
TPD52L2               0.964   tumor protein D52-like 2 isoform e 
TPD52L2               0.961   tumor protein D52-like 2 isoform b 
TPD52L2               0.937   tumor protein D52-like 2 isoform c 
TPD52L2               0.925   tumor protein D52-like 2 isoform a 
TPD52                 0.436   tumor protein D52 isoform 3 
TPD52                 0.436   tumor protein D52 isoform 1 
TPD52                 0.403   tumor protein D52 isoform 2 
TPD52L1               0.379   tumor protein D52-like 1 isoform 2 
TPD52L1               0.379   tumor protein D52-like 1 isoform 1 
TPD52L3               0.358   protein kinase NYD-SP25 isoform 1 
TPD52L1               0.328   tumor protein D52-like 1 isoform 4 
TPD52L1               0.322   tumor protein D52-like 1 isoform 3 
TPD52L3               0.316   protein kinase NYD-SP25 isoform 3 
TPD52L3               0.316   protein kinase NYD-SP25 isoform 2 
DCTN1                 0.042   dynactin 1 isoform 4 
DCTN1                 0.042   dynactin 1 isoform 3 
DCTN1                 0.042   dynactin 1 isoform 2 
DCTN1                 0.042   dynactin 1 isoform 1 
TIMM44                0.036   translocase of inner mitochondrial membrane 44 [Homo...
LUZP2                 0.027   leucine zipper protein 2 
GOLGB1                0.024   golgi autoantigen, golgin subfamily b, macrogolgin ...
GOLGA3                0.024   Golgi autoantigen, golgin subfamily a, 3 
NPTX2                 0.024   neuronal pentraxin II 
NPTX1                 0.021   neuronal pentraxin I precursor 
CDK5RAP2              0.021   CDK5 regulatory subunit associated protein 2 isoform...
CDK5RAP2              0.021   CDK5 regulatory subunit associated protein 2 isoform...
MSN                   0.021   moesin 
DLC1                  0.021   deleted in liver cancer 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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