Guide to the Human Genome
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Name: TPD52L2 Sequence: fasta or formatted (229aa) NCBI GI: 40805864
Description:

tumor protein D52-like 2 isoform a

Referenced in:

B cells

Other entries for this name:
alt prot [206aa] tumor protein D52-like 2 isoform e
alt prot [186aa] tumor protein D52-like 2 isoform f
alt prot [209aa] tumor protein D52-like 2 isoform b
alt prot [220aa] tumor protein D52-like 2 isoform c
alt prot [200aa] tumor protein D52-like 2 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         18           2
 C cysteine            0.4          1           1
 D aspartate           5.7         13           1
 E glutamate           8.3         19           4
 F phenylalanine       2.2          5           1
 G glycine             7.0         16           1
 H histidine           2.2          5           1
 I isoleucine          2.6          6           1
 K lysine              7.0         16           2
 L leucine             9.2         21           2
 M methionine          2.2          5           1
 N asparagine          3.5          8           1
 P proline             3.9          9           1
 Q glutamine           3.5          8           1
 R arginine            5.7         13           2
 S serine             13.5         31           2
 T threonine           6.6         15           1
 V valine              6.6         15           2
 W tryptophan          0.9          2           1
 Y tyrosine            1.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor protein D52-like 2 isoform a 
TPD52L2               0.936   tumor protein D52-like 2 isoform c 
TPD52L2               0.877   tumor protein D52-like 2 isoform b 
TPD52L2               0.860   tumor protein D52-like 2 isoform e 
TPD52L2               0.810   tumor protein D52-like 2 isoform d 
TPD52L2               0.735   tumor protein D52-like 2 isoform f 
TPD52                 0.391   tumor protein D52 isoform 2 
TPD52L1               0.334   tumor protein D52-like 1 isoform 2 
TPD52L1               0.334   tumor protein D52-like 1 isoform 1 
TPD52                 0.287   tumor protein D52 isoform 3 
TPD52                 0.287   tumor protein D52 isoform 1 
TPD52L1               0.273   tumor protein D52-like 1 isoform 3 
TPD52L3               0.242   protein kinase NYD-SP25 isoform 1 
TPD52L1               0.232   tumor protein D52-like 1 isoform 4 
TPD52L3               0.213   protein kinase NYD-SP25 isoform 3 
TPD52L3               0.213   protein kinase NYD-SP25 isoform 2 
LOC100291574          0.031   PREDICTED: hypothetical protein XP_002345618 
LOC100287418          0.028   PREDICTED: hypothetical protein XP_002342289 
DCTN1                 0.026   dynactin 1 isoform 4 
DCTN1                 0.026   dynactin 1 isoform 3 
DCTN1                 0.026   dynactin 1 isoform 2 
DCTN1                 0.026   dynactin 1 isoform 1 
CEP72                 0.021   centrosomal protein 72 kDa 
GOLGB1                0.021   golgi autoantigen, golgin subfamily b, macrogolgin ...
NPTX1                 0.017   neuronal pentraxin I precursor 
CDK5RAP2              0.017   CDK5 regulatory subunit associated protein 2 isoform...
CDK5RAP2              0.017   CDK5 regulatory subunit associated protein 2 isoform...
RGS17                 0.017   regulator of G-protein signalling 17 
ERC1                  0.017   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.017   RAB6-interacting protein 2 isoform delta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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