Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TPD52L3 Sequence: fasta or formatted (136aa) NCBI GI: 49574212
Description:

protein kinase NYD-SP25 isoform 2

Referenced in:

B cells

Other entries for this name:
alt prot [140aa] protein kinase NYD-SP25 isoform 1
alt prot [132aa] protein kinase NYD-SP25 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9          8           2
 C cysteine            1.5          2           1
 D aspartate           1.5          2           1
 E glutamate           8.8         12           1
 F phenylalanine       1.5          2           1
 G glycine             6.6          9           2
 H histidine           2.2          3           1
 I isoleucine          2.2          3           1
 K lysine              9.6         13           2
 L leucine            14.7         20           1
 M methionine          1.5          2           1
 N asparagine          3.7          5           1
 P proline             1.5          2           1
 Q glutamine           3.7          5           1
 R arginine            7.4         10           2
 S serine              8.1         11           1
 T threonine          11.0         15           1
 V valine              5.9          8           1
 W tryptophan          0.7          1           1
 Y tyrosine            2.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase NYD-SP25 isoform 2 
TPD52L3               0.900   protein kinase NYD-SP25 isoform 1 
TPD52L3               0.892   protein kinase NYD-SP25 isoform 3 
TPD52L2               0.440   tumor protein D52-like 2 isoform f 
TPD52L2               0.415   tumor protein D52-like 2 isoform e 
TPD52L2               0.402   tumor protein D52-like 2 isoform d 
TPD52L2               0.394   tumor protein D52-like 2 isoform b 
TPD52L2               0.378   tumor protein D52-like 2 isoform c 
TPD52L2               0.373   tumor protein D52-like 2 isoform a 
TPD52                 0.307   tumor protein D52 isoform 3 
TPD52                 0.307   tumor protein D52 isoform 1 
TPD52                 0.278   tumor protein D52 isoform 2 
TPD52L1               0.253   tumor protein D52-like 1 isoform 2 
TPD52L1               0.253   tumor protein D52-like 1 isoform 4 
TPD52L1               0.253   tumor protein D52-like 1 isoform 1 
TPD52L1               0.249   tumor protein D52-like 1 isoform 3 
TRIM71                0.041   tripartite motif-containing 71 
TRIM39                0.033   tripartite motif-containing 39 isoform 2 
TRIM39                0.033   tripartite motif-containing 39 isoform 1 
GOLGA4                0.029   golgi autoantigen, golgin subfamily a, 4 
JAKMIP3               0.021   Janus kinase and microtubule interacting protein 3 ...
BIRC6                 0.017   baculoviral IAP repeat-containing 6 
UACA                  0.017   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.017   uveal autoantigen with coiled-coil domains and ankyr...
WWC1                  0.017   WW and C2 domain containing 1 isoform 3 
WWC1                  0.017   WW and C2 domain containing 1 isoform 2 
WWC1                  0.017   WW and C2 domain containing 1 isoform 1 
GABBR2                0.017   G protein-coupled receptor 51 
AKAP9                 0.012   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.012   A-kinase anchor protein 9 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press