Guide to the Human Genome
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Name: TPD52L3 Sequence: fasta or formatted (132aa) NCBI GI: 49574216
Description:

protein kinase NYD-SP25 isoform 3

Referenced in:

B cells

Other entries for this name:
alt prot [136aa] protein kinase NYD-SP25 isoform 2
alt prot [140aa] protein kinase NYD-SP25 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1          8           2
 C cysteine            1.5          2           1
 D aspartate           1.5          2           1
 E glutamate           9.8         13           1
 F phenylalanine       0.8          1           1
 G glycine             7.6         10           2
 H histidine           2.3          3           1
 I isoleucine          2.3          3           1
 K lysine              9.8         13           2
 L leucine            13.6         18           1
 M methionine          1.5          2           1
 N asparagine          2.3          3           1
 P proline             2.3          3           1
 Q glutamine           3.0          4           1
 R arginine            7.6         10           2
 S serine              9.1         12           1
 T threonine          10.6         14           1
 V valine              6.1          8           1
 W tryptophan          0.8          1           1
 Y tyrosine            1.5          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase NYD-SP25 isoform 3 
TPD52L3               0.923   protein kinase NYD-SP25 isoform 1 
TPD52L3               0.923   protein kinase NYD-SP25 isoform 2 
TPD52L2               0.455   tumor protein D52-like 2 isoform f 
TPD52L2               0.429   tumor protein D52-like 2 isoform e 
TPD52L2               0.416   tumor protein D52-like 2 isoform d 
TPD52L2               0.408   tumor protein D52-like 2 isoform b 
TPD52L2               0.391   tumor protein D52-like 2 isoform c 
TPD52L2               0.386   tumor protein D52-like 2 isoform a 
TPD52                 0.318   tumor protein D52 isoform 3 
TPD52                 0.318   tumor protein D52 isoform 1 
TPD52                 0.288   tumor protein D52 isoform 2 
TPD52L1               0.262   tumor protein D52-like 1 isoform 2 
TPD52L1               0.262   tumor protein D52-like 1 isoform 4 
TPD52L1               0.262   tumor protein D52-like 1 isoform 1 
TPD52L1               0.258   tumor protein D52-like 1 isoform 3 
TRIM71                0.043   tripartite motif-containing 71 
TRIM39                0.034   tripartite motif-containing 39 isoform 2 
TRIM39                0.034   tripartite motif-containing 39 isoform 1 
GOLGA4                0.030   golgi autoantigen, golgin subfamily a, 4 
BIRC6                 0.021   baculoviral IAP repeat-containing 6 
GKAP1                 0.021   G kinase anchoring protein 1 isoform b 
JAKMIP3               0.021   Janus kinase and microtubule interacting protein 3 ...
UACA                  0.017   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.017   uveal autoantigen with coiled-coil domains and ankyr...
WWC1                  0.017   WW and C2 domain containing 1 isoform 3 
WWC1                  0.017   WW and C2 domain containing 1 isoform 2 
WWC1                  0.017   WW and C2 domain containing 1 isoform 1 
GABBR2                0.017   G protein-coupled receptor 51 
LOC100292974          0.013   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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