Guide to the Human Genome
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Name: TPD52L2 Sequence: fasta or formatted (209aa) NCBI GI: 40805866
Description:

tumor protein D52-like 2 isoform b

Referenced in:

B cells

Other entries for this name:
alt prot [206aa] tumor protein D52-like 2 isoform e
alt prot [186aa] tumor protein D52-like 2 isoform f
alt prot [229aa] tumor protein D52-like 2 isoform a
alt prot [220aa] tumor protein D52-like 2 isoform c
alt prot [200aa] tumor protein D52-like 2 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         18           2
 C cysteine            0.5          1           1
 D aspartate           5.7         12           1
 E glutamate           7.7         16           4
 F phenylalanine       2.4          5           1
 G glycine             7.2         15           1
 H histidine           2.4          5           1
 I isoleucine          2.9          6           1
 K lysine              6.2         13           2
 L leucine             9.1         19           2
 M methionine          2.4          5           1
 N asparagine          3.3          7           1
 P proline             4.3          9           1
 Q glutamine           3.3          7           1
 R arginine            6.2         13           2
 S serine             13.9         29           2
 T threonine           6.2         13           1
 V valine              6.2         13           2
 W tryptophan          0.5          1           1
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor protein D52-like 2 isoform b 
TPD52L2               0.969   tumor protein D52-like 2 isoform a 
TPD52L2               0.927   tumor protein D52-like 2 isoform d 
TPD52L2               0.895   tumor protein D52-like 2 isoform c 
TPD52L2               0.843   tumor protein D52-like 2 isoform f 
TPD52L2               0.812   tumor protein D52-like 2 isoform e 
TPD52                 0.463   tumor protein D52 isoform 2 
TPD52L1               0.401   tumor protein D52-like 1 isoform 2 
TPD52L1               0.401   tumor protein D52-like 1 isoform 1 
TPD52                 0.348   tumor protein D52 isoform 3 
TPD52                 0.348   tumor protein D52 isoform 1 
TPD52L1               0.332   tumor protein D52-like 1 isoform 3 
TPD52L1               0.288   tumor protein D52-like 1 isoform 4 
TPD52L3               0.280   protein kinase NYD-SP25 isoform 1 
TPD52L3               0.249   protein kinase NYD-SP25 isoform 3 
TPD52L3               0.249   protein kinase NYD-SP25 isoform 2 
LOC100291574          0.034   PREDICTED: hypothetical protein XP_002345618 
DCTN1                 0.031   dynactin 1 isoform 4 
DCTN1                 0.031   dynactin 1 isoform 3 
DCTN1                 0.031   dynactin 1 isoform 2 
DCTN1                 0.031   dynactin 1 isoform 1 
LOC100287418          0.031   PREDICTED: hypothetical protein XP_002342289 
CDC2L5                0.024   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.024   cell division cycle 2-like 5 isoform 2 
C6orf174              0.021   hypothetical protein LOC387104 
GOLGB1                0.021   golgi autoantigen, golgin subfamily b, macrogolgin ...
NPTX1                 0.018   neuronal pentraxin I precursor 
ZC3H18                0.018   zinc finger CCCH-type containing 18 
ZNF365                0.018   zinc finger protein 365 isoform A 
MSN                   0.018   moesin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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