Guide to the Human Genome
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Name: TPD52L2 Sequence: fasta or formatted (220aa) NCBI GI: 40805868
Description:

tumor protein D52-like 2 isoform c

Referenced in:

B cells

Other entries for this name:
alt prot [206aa] tumor protein D52-like 2 isoform e
alt prot [186aa] tumor protein D52-like 2 isoform f
alt prot [229aa] tumor protein D52-like 2 isoform a
alt prot [209aa] tumor protein D52-like 2 isoform b
alt prot [200aa] tumor protein D52-like 2 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         17           2
 C cysteine            0.5          1           1
 D aspartate           5.9         13           1
 E glutamate           8.6         19           4
 F phenylalanine       1.4          3           1
 G glycine             7.3         16           1
 H histidine           1.4          3           1
 I isoleucine          2.7          6           1
 K lysine              7.3         16           2
 L leucine             9.5         21           2
 M methionine          2.3          5           1
 N asparagine          3.6          8           1
 P proline             3.6          8           1
 Q glutamine           3.6          8           1
 R arginine            5.5         12           2
 S serine             13.2         29           2
 T threonine           6.8         15           1
 V valine              6.8         15           2
 W tryptophan          0.9          2           1
 Y tyrosine            1.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor protein D52-like 2 isoform c 
TPD52L2               0.983   tumor protein D52-like 2 isoform a 
TPD52L2               0.910   tumor protein D52-like 2 isoform e 
TPD52L2               0.871   tumor protein D52-like 2 isoform d 
TPD52L2               0.851   tumor protein D52-like 2 isoform b 
TPD52L2               0.781   tumor protein D52-like 2 isoform f 
TPD52                 0.366   tumor protein D52 isoform 2 
TPD52L1               0.361   tumor protein D52-like 1 isoform 2 
TPD52L1               0.361   tumor protein D52-like 1 isoform 1 
TPD52                 0.308   tumor protein D52 isoform 3 
TPD52                 0.308   tumor protein D52 isoform 1 
TPD52L1               0.294   tumor protein D52-like 1 isoform 3 
TPD52L3               0.261   protein kinase NYD-SP25 isoform 1 
TPD52L1               0.239   tumor protein D52-like 1 isoform 4 
TPD52L3               0.226   protein kinase NYD-SP25 isoform 3 
TPD52L3               0.226   protein kinase NYD-SP25 isoform 2 
DCTN1                 0.027   dynactin 1 isoform 4 
DCTN1                 0.027   dynactin 1 isoform 3 
DCTN1                 0.027   dynactin 1 isoform 2 
DCTN1                 0.027   dynactin 1 isoform 1 
GOLGB1                0.025   golgi autoantigen, golgin subfamily b, macrogolgin ...
NPTX1                 0.020   neuronal pentraxin I precursor 
SLMAP                 0.020   sarcolemma associated protein 
UACA                  0.017   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.017   uveal autoantigen with coiled-coil domains and ankyr...
MYH8                  0.017   myosin, heavy chain 8, skeletal muscle, perinatal [...
ERC1                  0.017   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.017   RAB6-interacting protein 2 isoform delta 
AIMP1                 0.017   small inducible cytokine subfamily E, member 1 isof...
AIMP1                 0.017   small inducible cytokine subfamily E, member 1 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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