Guide to the Human Genome
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Name: VWA3B Sequence: fasta or formatted (1294aa) NCBI GI: 118918435
Description:

von Willebrand factor A domain containing 3B

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         95           2
 C cysteine            1.9         24           1
 D aspartate           5.3         69           2
 E glutamate           7.7        100           2
 F phenylalanine       3.2         42           1
 G glycine             4.5         58           2
 H histidine           2.3         30           1
 I isoleucine          5.1         66           2
 K lysine              8.4        109           3
 L leucine             9.2        119           3
 M methionine          1.5         19           1
 N asparagine          3.4         44           2
 P proline             4.9         64           3
 Q glutamine           5.5         71           2
 R arginine            4.5         58           3
 S serine              8.7        113           2
 T threonine           5.6         72           2
 V valine              6.5         84           2
 W tryptophan          1.7         22           2
 Y tyrosine            2.7         35           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   von Willebrand factor A domain containing 3B 
VWA3A                 0.059   von Willebrand factor A domain containing 3A 
ITIH3                 0.011   inter-alpha (globulin) inhibitor H3 preproprotein [...
ITIH4                 0.009   inter-alpha (globulin) inhibitor H4 
ITIH1                 0.008   inter-alpha (globulin) inhibitor H1 
ITIH5                 0.007   inter-alpha trypsin inhibitor heavy chain precursor ...
ITIH5                 0.007   inter-alpha trypsin inhibitor heavy chain precursor...
ITIH5                 0.007   inter-alpha trypsin inhibitor heavy chain precursor...
EXPH5                 0.005   exophilin 5 isoform c 
EXPH5                 0.005   exophilin 5 isoform b 
EXPH5                 0.005   exophilin 5 isoform a 
RNF219                0.005   ring finger protein 219 
SMARCE1               0.004   SWI/SNF-related matrix-associated actin-dependent re...
FHAD1                 0.004   forkhead-associated (FHA) phosphopeptide binding do...
MYO10                 0.004   myosin X 
KCTD1                 0.004   potassium channel tetramerisation domain containing...
CCDC63                0.003   coiled-coil domain containing 63 
ANKRD18A              0.003   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.003   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.003   PREDICTED: ankyrin repeat domain 18A 
LOC100170229          0.003   hypothetical protein LOC100170229 
MYH15                 0.003   myosin, heavy polypeptide 15 
TCOF1                 0.003   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.003   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.003   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.003   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.003   Treacher Collins-Franceschetti syndrome 1 isoform a ...
FAM171B               0.003   KIAA1946 
SFRS18                0.003   splicing factor, arginine/serine-rich 130 
SFRS18                0.003   splicing factor, arginine/serine-rich 130 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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