Guide to the Human Genome
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Name: RPL3L Sequence: fasta or formatted (407aa) NCBI GI: 4826988
Description:

ribosomal protein L3-like

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         27           2
 C cysteine            1.5          6           1
 D aspartate           3.2         13           2
 E glutamate           4.9         20           2
 F phenylalanine       4.2         17           1
 G glycine             7.9         32           2
 H histidine           6.1         25           2
 I isoleucine          4.4         18           1
 K lysine             12.0         49           3
 L leucine             6.4         26           2
 M methionine          2.0          8           1
 N asparagine          1.7          7           2
 P proline             4.4         18           2
 Q glutamine           3.4         14           1
 R arginine            8.1         33           3
 S serine              4.9         20           1
 T threonine           6.6         27           2
 V valine              8.4         34           3
 W tryptophan          1.5          6           1
 Y tyrosine            1.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein L3-like 
RPL3                  0.788   ribosomal protein L3 isoform a 
RPL3                  0.658   ribosomal protein L3 isoform b 
LOC653881             0.196   PREDICTED: similar to ribosomal protein L3, partial...
MRPL3                 0.020   mitochondrial ribosomal protein L3 
CACHD1                0.015   cache domain containing 1 
C13orf38              0.007   hypothetical protein LOC728591 isoform b 
C13orf38              0.007   hypothetical protein LOC728591 isoform b 
ITIH5                 0.006   inter-alpha trypsin inhibitor heavy chain precursor ...
ITIH5                 0.006   inter-alpha trypsin inhibitor heavy chain precursor...
ITIH5                 0.006   inter-alpha trypsin inhibitor heavy chain precursor...
C13orf38              0.006   hypothetical protein LOC728591 isoform c 
CERK                  0.005   ceramide kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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