Guide to the Human Genome
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Name: CCRL2 Sequence: fasta or formatted (344aa) NCBI GI: 68215224
Description:

chemokine (C-C motif) receptor-like 2 isoform 1

Referenced in:

Chemokines and Their Receptors

Other entries for this name:
alt prot [356aa] chemokine (C-C motif) receptor-like 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         22           1
 C cysteine            3.5         12           2
 D aspartate           3.8         13           1
 E glutamate           4.9         17           2
 F phenylalanine       8.1         28           2
 G glycine             3.5         12           2
 H histidine           2.3          8           1
 I isoleucine          4.7         16           2
 K lysine              5.2         18           1
 L leucine            14.8         51           2
 M methionine          2.0          7           1
 N asparagine          3.5         12           1
 P proline             4.4         15           1
 Q glutamine           3.2         11           1
 R arginine            4.1         14           3
 S serine              6.4         22           2
 T threonine           5.8         20           2
 V valine              7.6         26           2
 W tryptophan          1.2          4           1
 Y tyrosine            4.7         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chemokine (C-C motif) receptor-like 2 isoform 1 [Hom... 
CCRL2                 1.000   chemokine (C-C motif) receptor-like 2 isoform 2 [Ho...
CCR5                  0.344   chemokine (C-C motif) receptor 5 
CCR5                  0.344   chemokine (C-C motif) receptor 5 
CCR1                  0.341   chemokine (C-C motif) receptor 1 
CCR3                  0.338   CC chemokine receptor 3 
CCR3                  0.338   CC chemokine receptor 3 
CCR2                  0.332   chemokine (C-C motif) receptor 2 isoform B 
CCR2                  0.327   chemokine (C-C motif) receptor 2 isoform A 
CCR4                  0.265   chemokine (C-C motif) receptor 4 
CCR8                  0.236   chemokine (C-C motif) receptor 8 
CX3CR1                0.209   chemokine (C-X3-C motif) receptor 1 
CCBP2                 0.200   chemokine binding protein 2 
XCR1                  0.173   XC chemokine receptor 1 
XCR1                  0.173   XC chemokine receptor 1 
CXCR6                 0.169   G protein-coupled receptor TYMSTR 
AGTR1                 0.164   angiotensin II receptor, type 1 
AGTR1                 0.164   angiotensin II receptor, type 1 
AGTR1                 0.164   angiotensin II receptor, type 1 
AGTR1                 0.164   angiotensin II receptor, type 1 
AGTR1                 0.164   angiotensin II receptor, type 1 
CCR7                  0.156   chemokine (C-C motif) receptor 7 precursor 
CXCR4                 0.151   chemokine (C-X-C motif) receptor 4 isoform b 
CXCR4                 0.150   chemokine (C-X-C motif) receptor 4 isoform a 
CCR6                  0.148   chemokine (C-C motif) receptor 6 
CCR6                  0.148   chemokine (C-C motif) receptor 6 
CCR9                  0.148   chemokine (C-C motif) receptor 9 isoform B 
CCR9                  0.148   chemokine (C-C motif) receptor 9 isoform A 
CXCR5                 0.147   Burkitt lymphoma receptor 1 isoform 1 
CXCR5                 0.147   Burkitt lymphoma receptor 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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