Guide to the Human Genome
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Name: PPP4R1 Sequence: fasta or formatted (933aa) NCBI GI: 4826934
Description:

protein phosphatase 4, regulatory subunit 1 isoform b

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [950aa] protein phosphatase 4, regulatory subunit 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         71           2
 C cysteine            2.7         25           2
 D aspartate           7.7         72           2
 E glutamate           8.7         81           3
 F phenylalanine       3.5         33           2
 G glycine             2.6         24           2
 H histidine           2.1         20           1
 I isoleucine          4.6         43           1
 K lysine              4.1         38           2
 L leucine            11.5        107           3
 M methionine          2.7         25           1
 N asparagine          3.9         36           2
 P proline             5.0         47           2
 Q glutamine           4.6         43           2
 R arginine            5.6         52           2
 S serine              8.9         83           3
 T threonine           4.6         43           2
 V valine              6.8         63           2
 W tryptophan          0.9          8           1
 Y tyrosine            2.0         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 4, regulatory subunit 1 isoform b... 
PPP4R1                0.993   protein phosphatase 4, regulatory subunit 1 isoform...
PPP2R1A               0.026   alpha isoform of regulatory subunit A, protein phosp...
PPP2R1B               0.022   beta isoform of regulatory subunit A, protein phosph...
PPP2R1B               0.022   beta isoform of regulatory subunit A, protein phosph...
PPP4R4                0.012   HEAT-like repeat-containing protein isoform 1 
CHD5                  0.009   chromodomain helicase DNA binding protein 5 
SCYL1                 0.008   SCY1-like 1 isoform B 
SCYL1                 0.008   SCY1-like 1 isoform A 
KIAA0586              0.007   talpid3 protein 
NUP98                 0.006   nucleoporin 98kD isoform 4 
NUP98                 0.006   nucleoporin 98kD isoform 1 
NOB1                  0.006   nin one binding protein 
KRT222P               0.006   truncated type I keratin KA21 
MRVI1                 0.005   JAW1-related protein isoform a 
MRVI1                 0.005   JAW1-related protein isoform c 
MRVI1                 0.005   JAW1-related protein isoform b 
MRVI1                 0.005   JAW1-related protein isoform b 
RP1L1                 0.005   retinitis pigmentosa 1-like 1 
TRIM44                0.005   DIPB protein 
ERBB2IP               0.005   ERBB2 interacting protein isoform 7 
ERBB2IP               0.005   ERBB2 interacting protein isoform 2 
USP37                 0.005   ubiquitin specific peptidase 37 
ADFP                  0.005   adipose differentiation-related protein 
PIK3R4                0.005   phosphoinositide-3-kinase, regulatory subunit 4 [Hom...
AFF1                  0.005   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
OGFRL1                0.005   opioid growth factor receptor-like 1 
DOPEY1                0.005   dopey family member 1 
G3BP1                 0.005   Ras-GTPase-activating protein SH3-domain-binding prot...
G3BP1                 0.005   Ras-GTPase-activating protein SH3-domain-binding pro...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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