Guide to the Human Genome
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Name: SCYL1 Sequence: fasta or formatted (791aa) NCBI GI: 115430243
Description:

SCY1-like 1 isoform B

Not currently referenced in the text

Other entries for this name:
alt prot {808aa} SCY1-like 1 isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         69           3
 C cysteine            1.4         11           1
 D aspartate           5.1         40           2
 E glutamate           8.5         67           2
 F phenylalanine       4.2         33           2
 G glycine             7.0         55           3
 H histidine           2.0         16           1
 I isoleucine          3.2         25           2
 K lysine              6.1         48           2
 L leucine             8.6         68           3
 M methionine          1.8         14           1
 N asparagine          3.2         25           2
 P proline             7.2         57           3
 Q glutamine           4.4         35           2
 R arginine            6.1         48           3
 S serine              7.6         60           2
 T threonine           4.8         38           2
 V valine              6.3         50           3
 W tryptophan          2.5         20           1
 Y tyrosine            1.5         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SCY1-like 1 isoform B 
SCYL1                 0.993   SCY1-like 1 isoform A 
SCYL3                 0.064   SCY1-like 3 isoform 2 
SCYL3                 0.064   SCY1-like 3 isoform 1 
SCYL2                 0.061   SCY1-like 2 protein 
STK36                 0.019   serine/threonine kinase 36 
MARK4                 0.019   MAP/microtubule affinity-regulating kinase 4 
MARK1                 0.019   MAP/microtubule affinity-regulating kinase 1 
MARK2                 0.018   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.018   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.018   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.018   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.018   MAP/microtubule affinity-regulating kinase 2 isoform...
MARK3                 0.018   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.018   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.018   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.018   MAP/microtubule affinity-regulating kinase 3 isoform...
NEK9                  0.016   NIMA-related kinase 9 
MAP3K5                0.016   mitogen-activated protein kinase kinase kinase 5 [Hom...
HUNK                  0.015   hormonally upregulated Neu-associated kinase 
CDKL3                 0.015   cyclin-dependent kinase-like 3 isoform 1 
CDKL3                 0.015   cyclin-dependent kinase-like 3 isoform 2 
PLK2                  0.014   polo-like kinase 2 
BRSK1                 0.014   BR serine/threonine kinase 1 
CDKL2                 0.013   cyclin-dependent kinase-like 2 
MAP3K6                0.013   mitogen-activated protein kinase kinase kinase 6 [Ho...
BAT2                  0.013   HLA-B associated transcript-2 
MAP3K15               0.013   mitogen-activated protein kinase kinase kinase 15 [...
NEK1                  0.013   NIMA-related kinase 1 
MAPK15                0.012   mitogen-activated protein kinase 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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