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Search of human proteins with 13376029
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform
2 [Homo sapiens]
(305 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform... 642 0.0
gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform ... 642 0.0
gi|209364600 acyl-Coenzyme A binding domain containing 4 isoform... 413 e-115
gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform... 369 e-102
gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform... 369 e-102
gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform... 150 2e-36
gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform... 150 2e-36
gi|120433590 diazepam binding inhibitor isoform 3 [Homo sapiens] 73 4e-13
gi|10140853 diazepam binding inhibitor isoform 1 [Homo sapiens] 73 4e-13
gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... 73 4e-13
gi|120433593 diazepam binding inhibitor isoform 2 [Homo sapiens] 71 1e-12
gi|14150169 acyl-coenzyme A binding domain containing 6 [Homo sa... 61 1e-09
gi|89886362 acyl-Coenzyme A binding domain containing 7 [Homo sa... 55 6e-08
gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo sa... 50 3e-06
gi|169208924 PREDICTED: similar to hCG1652800 [Homo sapiens] 41 0.001
gi|89039114 PREDICTED: similar to hCG1652800 [Homo sapiens] 41 0.001
gi|89038414 PREDICTED: similar to diazepam binding inhibitor [Ho... 41 0.001
gi|21735550 mitogen-activated protein kinase kinase kinase 10 [H... 40 0.002
gi|194239681 tubulin tyrosine ligase-like family, member 10 isof... 36 0.037
gi|238859651 pleckstrin homology domain containing family A memb... 36 0.048
gi|187171277 DNA-directed DNA polymerase gamma [Homo sapiens] 35 0.083
gi|4505937 DNA-directed DNA polymerase gamma [Homo sapiens] 35 0.083
gi|144226847 obscurin-like 1 [Homo sapiens] 35 0.083
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 35 0.083
gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens] 35 0.083
gi|33300670 hypothetical protein LOC84331 [Homo sapiens] 35 0.11
gi|28558977 mediator complex subunit 26 [Homo sapiens] 34 0.14
gi|54860079 nadrin isoform 1 [Homo sapiens] 34 0.14
gi|54860105 nadrin isoform 2 [Homo sapiens] 34 0.14
gi|41281612 zinc finger protein 828 [Homo sapiens] 34 0.18
>gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform 2
[Homo sapiens]
Length = 305
Score = 642 bits (1656), Expect = 0.0
Identities = 305/305 (100%), Positives = 305/305 (100%)
Query: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG
Sbjct: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
Query: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY
Sbjct: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
Query: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF 180
QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF
Sbjct: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF 180
Query: 181 CDSLEQLEPELVWTEQRAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRAL 240
CDSLEQLEPELVWTEQRAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRAL
Sbjct: 181 CDSLEQLEPELVWTEQRAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRAL 240
Query: 241 QESMQEVQARVQSLESMPRPPEQRPQPRPSARPWPLGLPGPALLFFLLWPFVVQWLFRMF 300
QESMQEVQARVQSLESMPRPPEQRPQPRPSARPWPLGLPGPALLFFLLWPFVVQWLFRMF
Sbjct: 241 QESMQEVQARVQSLESMPRPPEQRPQPRPSARPWPLGLPGPALLFFLLWPFVVQWLFRMF 300
Query: 301 RTQKR 305
RTQKR
Sbjct: 301 RTQKR 305
>gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform 2
[Homo sapiens]
Length = 305
Score = 642 bits (1656), Expect = 0.0
Identities = 305/305 (100%), Positives = 305/305 (100%)
Query: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG
Sbjct: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
Query: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY
Sbjct: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
Query: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF 180
QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF
Sbjct: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF 180
Query: 181 CDSLEQLEPELVWTEQRAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRAL 240
CDSLEQLEPELVWTEQRAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRAL
Sbjct: 181 CDSLEQLEPELVWTEQRAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRAL 240
Query: 241 QESMQEVQARVQSLESMPRPPEQRPQPRPSARPWPLGLPGPALLFFLLWPFVVQWLFRMF 300
QESMQEVQARVQSLESMPRPPEQRPQPRPSARPWPLGLPGPALLFFLLWPFVVQWLFRMF
Sbjct: 241 QESMQEVQARVQSLESMPRPPEQRPQPRPSARPWPLGLPGPALLFFLLWPFVVQWLFRMF 300
Query: 301 RTQKR 305
RTQKR
Sbjct: 301 RTQKR 305
>gi|209364600 acyl-Coenzyme A binding domain containing 4 isoform 3
[Homo sapiens]
Length = 268
Score = 413 bits (1061), Expect = e-115
Identities = 203/260 (78%), Positives = 215/260 (82%), Gaps = 3/260 (1%)
Query: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG
Sbjct: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
Query: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY
Sbjct: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
Query: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF 180
QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF
Sbjct: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVF 180
Query: 181 CDSLEQLEPELVWTEQRAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRAL 240
CDSLEQLEPEL + S P +P PP +K G + GP+ G
Sbjct: 181 CDSLEQLEPELSSGQHLEES---VIPGTAPCPPQRKRGCGAARRGPRSWTCGCWGQFEHY 237
Query: 241 QESMQEVQARVQSLESMPRP 260
+ + + + ++ + P P
Sbjct: 238 RRACRRCRRGCRAWRACPGP 257
>gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform 1
[Homo sapiens]
Length = 341
Score = 369 bits (948), Expect = e-102
Identities = 190/294 (64%), Positives = 208/294 (70%), Gaps = 13/294 (4%)
Query: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG
Sbjct: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
Query: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY
Sbjct: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
Query: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPES----HSPRDLD 176
QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSP S P
Sbjct: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPASLWAVTLPTPPQ 180
Query: 177 SEVFCDSLEQLEPELVWTEQRAASGGKRD---------PRNSPVPPTKKEGLRGSPPGPQ 227
S + + + W+ + G+ P +P PP +K G + GP+
Sbjct: 181 SPIHPGTWTPRFSVIPWSSWSLSWFGQSSGQHLEESVIPGTAPCPPQRKRGCGAARRGPR 240
Query: 228 ELDVWLLGTVRALQESMQEVQARVQSLESMPRPPEQRPQPRPSARPWPLGLPGP 281
G + + + + ++ + P P + P P PLG GP
Sbjct: 241 SWTCGCWGQFEHYRRACRRCRRGCRAWRACPGPLSRGRSPGPVLGHGPLGSRGP 294
>gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform 1
[Homo sapiens]
Length = 341
Score = 369 bits (948), Expect = e-102
Identities = 190/294 (64%), Positives = 208/294 (70%), Gaps = 13/294 (4%)
Query: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG
Sbjct: 1 MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPG 60
Query: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY
Sbjct: 61 FWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLY 120
Query: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPES----HSPRDLD 176
QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSP S P
Sbjct: 121 QVIPDMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPASLWAVTLPTPPQ 180
Query: 177 SEVFCDSLEQLEPELVWTEQRAASGGKRD---------PRNSPVPPTKKEGLRGSPPGPQ 227
S + + + W+ + G+ P +P PP +K G + GP+
Sbjct: 181 SPIHPGTWTPRFSVIPWSSWSLSWFGQSSGQHLEESVIPGTAPCPPQRKRGCGAARRGPR 240
Query: 228 ELDVWLLGTVRALQESMQEVQARVQSLESMPRPPEQRPQPRPSARPWPLGLPGP 281
G + + + + ++ + P P + P P PLG GP
Sbjct: 241 SWTCGCWGQFEHYRRACRRCRRGCRAWRACPGPLSRGRSPGPVLGHGPLGSRGP 294
>gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform 2
[Homo sapiens]
Length = 490
Score = 150 bits (378), Expect = 2e-36
Identities = 85/207 (41%), Positives = 120/207 (57%), Gaps = 20/207 (9%)
Query: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
+ +F+AAV VIQ+LPKNGS++P+ E ML+FYS+YKQAT GPC + RPGFWDPIGRYKWDA
Sbjct: 9 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 68
Query: 73 WNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLYQVIPDMPRPPET 132
W+SLG M++EEAM AY+ EMK K+I+T+P+ E E++ P Y+++ D +
Sbjct: 69 WSSLGDMTKEEAMIAYVEEMK----KIIETMPMTEKVEELLRVIGPFYEIVEDKKSGRSS 124
Query: 133 FLRRVTG------WKEQVVNG-----DVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVFC 181
+ G + VNG D GA SE +E A + D D ++
Sbjct: 125 DITSDLGNVLTSTPNAKTVNGKAESSDSGAESE-----EEEAQEEVKGAEQSDNDKKMMK 179
Query: 182 DSLEQLEPELVWTEQRAASGGKRDPRN 208
S + E++ T G +D +N
Sbjct: 180 KSADHKNLEVIVTNGYDKDGFVQDIQN 206
Score = 47.0 bits (110), Expect = 2e-05
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 21/81 (25%)
Query: 240 LQESMQEVQARVQSLESM---------------PRPPEQRPQPRPSARPWPLGLPGPALL 284
LQE MQ V R+Q LE++ P+P QRP WP + L
Sbjct: 412 LQEDMQNVLQRLQKLETLTALQAKSSTSTLQTAPQPTSQRPSW------WPFEMSPGVLT 465
Query: 285 FFLLWPFVVQWLFRMFRTQKR 305
F ++WPF+ QWL ++ ++R
Sbjct: 466 FAIIWPFIAQWLVYLYYQRRR 486
Score = 28.9 bits (63), Expect = 5.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 170 HSPRDLDSEVFCDSLEQLEPE 190
H D DSEV+CDS+EQ E
Sbjct: 256 HLTSDSDSEVYCDSMEQFGQE 276
>gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform 1
[Homo sapiens]
Length = 525
Score = 150 bits (378), Expect = 2e-36
Identities = 85/207 (41%), Positives = 120/207 (57%), Gaps = 20/207 (9%)
Query: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
+ +F+AAV VIQ+LPKNGS++P+ E ML+FYS+YKQAT GPC + RPGFWDPIGRYKWDA
Sbjct: 44 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 103
Query: 73 WNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLYQVIPDMPRPPET 132
W+SLG M++EEAM AY+ EMK K+I+T+P+ E E++ P Y+++ D +
Sbjct: 104 WSSLGDMTKEEAMIAYVEEMK----KIIETMPMTEKVEELLRVIGPFYEIVEDKKSGRSS 159
Query: 133 FLRRVTG------WKEQVVNG-----DVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVFC 181
+ G + VNG D GA SE +E A + D D ++
Sbjct: 160 DITSDLGNVLTSTPNAKTVNGKAESSDSGAESE-----EEEAQEEVKGAEQSDNDKKMMK 214
Query: 182 DSLEQLEPELVWTEQRAASGGKRDPRN 208
S + E++ T G +D +N
Sbjct: 215 KSADHKNLEVIVTNGYDKDGFVQDIQN 241
Score = 47.0 bits (110), Expect = 2e-05
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 21/81 (25%)
Query: 240 LQESMQEVQARVQSLESM---------------PRPPEQRPQPRPSARPWPLGLPGPALL 284
LQE MQ V R+Q LE++ P+P QRP WP + L
Sbjct: 447 LQEDMQNVLQRLQKLETLTALQAKSSTSTLQTAPQPTSQRPSW------WPFEMSPGVLT 500
Query: 285 FFLLWPFVVQWLFRMFRTQKR 305
F ++WPF+ QWL ++ ++R
Sbjct: 501 FAIIWPFIAQWLVYLYYQRRR 521
Score = 28.9 bits (63), Expect = 5.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 170 HSPRDLDSEVFCDSLEQLEPE 190
H D DSEV+CDS+EQ E
Sbjct: 291 HLTSDSDSEVYCDSMEQFGQE 311
>gi|120433590 diazepam binding inhibitor isoform 3 [Homo sapiens]
Length = 87
Score = 72.8 bits (177), Expect = 4e-13
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
Q +F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDA
Sbjct: 3 QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDA 58
Query: 73 WNSLGKMSREEAMSAYITEMKLVAQK 98
WN L S+E+AM AYI +++ + +K
Sbjct: 59 WNELKGTSKEDAMKAYINKVEELKKK 84
>gi|10140853 diazepam binding inhibitor isoform 1 [Homo sapiens]
Length = 104
Score = 72.8 bits (177), Expect = 4e-13
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 7 SPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIG 66
+P + +F+ A +++L +PS EEML Y +YKQAT+G RPG D G
Sbjct: 14 NPGTGTEAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTG 69
Query: 67 RYKWDAWNSLGKMSREEAMSAYITEMKLVAQK 98
+ KWDAWN L S+E+AM AYI +++ + +K
Sbjct: 70 KAKWDAWNELKGTSKEDAMKAYINKVEELKKK 101
>gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo
sapiens]
Length = 364
Score = 72.8 bits (177), Expect = 4e-13
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
QK F+ +++ ++ L K+ P E L+ Y+ YKQAT GPC +P+PG +D I + KWDA
Sbjct: 10 QKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDA 65
Query: 73 WNSLGKMSREEAMSAYI 89
WN+LG + +E A Y+
Sbjct: 66 WNALGSLPKEAARQNYV 82
>gi|120433593 diazepam binding inhibitor isoform 2 [Homo sapiens]
Length = 88
Score = 71.2 bits (173), Expect = 1e-12
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 15 QFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWN 74
+F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDAWN
Sbjct: 6 EFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWN 61
Query: 75 SLGKMSREEAMSAYITEMKLVAQK 98
L S+E+AM AYI +++ + +K
Sbjct: 62 ELKGTSKEDAMKAYINKVEELKKK 85
>gi|14150169 acyl-coenzyme A binding domain containing 6 [Homo
sapiens]
Length = 282
Score = 60.8 bits (146), Expect = 1e-09
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 6 ESPEPDCQKQ-FQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDP 64
E E C + F+ A + +Q L + S E++L Y+ YKQ +G C P+P F+D
Sbjct: 35 EIEETSCLAELFEKAAAHLQGLIQVASR----EQLLYLYARYKQVKVGNCNTPKPSFFDF 90
Query: 65 IGRYKWDAWNSLGKMSREEAMSAYITEMK 93
G+ KW+AW +LG S +AM YI +K
Sbjct: 91 EGKQKWEAWKALGDSSPSQAMQEYIAVVK 119
>gi|89886362 acyl-Coenzyme A binding domain containing 7 [Homo
sapiens]
Length = 88
Score = 55.5 bits (132), Expect = 6e-08
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
Q F A ++ L RP E+ Y YKQA +G + PG D G+ KW+A
Sbjct: 4 QADFDRAAEDVRKLKA----RPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEA 59
Query: 73 WNSLGKMSREEAMSAYITEMKLVAQK 98
WN +S E+A SAYI++ K + +K
Sbjct: 60 WNLKKGLSTEDATSAYISKAKELIEK 85
>gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo
sapiens]
Length = 528
Score = 49.7 bits (117), Expect = 3e-06
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 31 SYRPSYEEMLRFYSYYKQATMGPC---LVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSA 87
++ P+YEE L+ + +KQ MGP P GF+D +G + W +LG MS+E+AM
Sbjct: 101 AFHPTYEEKLKLVALHKQVLMGPYNPDTCPEVGFFDVLGNDRRREWAALGNMSKEDAMVE 160
Query: 88 YI 89
++
Sbjct: 161 FV 162
>gi|169208924 PREDICTED: similar to hCG1652800 [Homo sapiens]
Length = 88
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 33 RPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEM 92
RP EE+ Y YKQA +G + + G+ KW+A N +S E+ M A+I++
Sbjct: 20 RPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQKGLSEEDMMRAFISKA 79
Query: 93 KLVAQK 98
+ + +K
Sbjct: 80 EELIEK 85
>gi|89039114 PREDICTED: similar to hCG1652800 [Homo sapiens]
Length = 88
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 33 RPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEM 92
RP EE+ Y YKQA +G + + G+ KW+A N +S E+ M A+I++
Sbjct: 20 RPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQKGLSEEDMMRAFISKA 79
Query: 93 KLVAQK 98
+ + +K
Sbjct: 80 EELIEK 85
>gi|89038414 PREDICTED: similar to diazepam binding inhibitor
[Homo sapiens]
Length = 88
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 33 RPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEM 92
RP EE+ Y YKQA +G + + G+ KW+A N +S E+ M A+I++
Sbjct: 20 RPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQKGLSEEDMMRAFISKA 79
Query: 93 KLVAQK 98
+ + +K
Sbjct: 80 EELIEK 85
>gi|21735550 mitogen-activated protein kinase kinase kinase 10 [Homo
sapiens]
Length = 954
Score = 40.4 bits (93), Expect = 0.002
Identities = 42/133 (31%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 151 AVSEPPCLPKEPAP-PSPESHSPRDLDSEVF-CDSLEQLEPELVWTEQRAASGGKRDPRN 208
A PP P P P PSP ++ DL+ E F D + L P V + G +R P +
Sbjct: 772 AAPSPPPSPPAPTPTPSPSTNPLVDLELESFKKDPRQSLTPTHVTAACAVSRGHRRTPSD 831
Query: 209 SPVPPTKKEGLRGSPPGPQE-LDVWLLGTVRAL---QESMQEVQARVQSLESMPRPPEQR 264
+ G PGP++ LD L +AL + E R +L PRP R
Sbjct: 832 GALGQRGPPEPAGHGPGPRDLLDFPRLPDPQALFPARRRPPEFPGRPTTLTFAPRP---R 888
Query: 265 P-QPRPSARPWPL 276
P RP PW L
Sbjct: 889 PAASRPRLDPWKL 901
>gi|194239681 tubulin tyrosine ligase-like family, member 10 isoform
1 [Homo sapiens]
Length = 673
Score = 36.2 bits (82), Expect = 0.037
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 14/63 (22%)
Query: 155 PPCLPKEPAPPSPESHSPRDLDSEVFCDSLEQLEPELVWTEQRAASGGKRDPRNSPVPPT 214
PP +P+ P PP P+ DS EP+ TEQ + G R P P P T
Sbjct: 615 PPLVPQRPRPPGPD------------LDSAHDGEPQAPGTEQ--SGTGNRHPAQEPSPGT 660
Query: 215 KKE 217
KE
Sbjct: 661 AKE 663
>gi|238859651 pleckstrin homology domain containing family A member
4 isoform 1 [Homo sapiens]
Length = 779
Score = 35.8 bits (81), Expect = 0.048
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 5/133 (3%)
Query: 140 WKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVFCDSLEQLEPELVWTEQRAA 199
W + +G +PP EP PSP + E +SLE P T+
Sbjct: 485 WMVEDTLAGLGGPQKPPP-HTEPDSPSPVLQGEESSERESLPESLELSSPRSPETDWGRP 543
Query: 200 SGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRALQESMQEVQARVQSLESMPR 259
GG +D + + R S P + L LGT + Q + LE M R
Sbjct: 544 PGGDKDLASPHLGLGSPRVSRASSPEGRHLPSPQLGTKAPVARPRMSAQ---EQLERMRR 600
Query: 260 PPE-QRPQPRPSA 271
E RP PRP++
Sbjct: 601 NQECGRPFPRPTS 613
>gi|187171277 DNA-directed DNA polymerase gamma [Homo sapiens]
Length = 1239
Score = 35.0 bits (79), Expect = 0.083
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 17/113 (15%)
Query: 184 LEQLEPELVWTEQRAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRALQES 243
L LE +L +Q+ A K++P + P + G G P ++ LG +E
Sbjct: 485 LWDLEWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQED-----LGPCSEEEEF 539
Query: 244 MQEVQAR--VQSLESMPRPPEQRPQPRPSARPW----------PLGLPGPALL 284
Q+V AR +Q L+ +RPQ P W P PGP+LL
Sbjct: 540 QQDVMARACLQKLKGTTELLPKRPQHLPGHPGWYRKLCPRLDDPAWTPGPSLL 592
>gi|4505937 DNA-directed DNA polymerase gamma [Homo sapiens]
Length = 1239
Score = 35.0 bits (79), Expect = 0.083
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 17/113 (15%)
Query: 184 LEQLEPELVWTEQRAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRALQES 243
L LE +L +Q+ A K++P + P + G G P ++ LG +E
Sbjct: 485 LWDLEWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQED-----LGPCSEEEEF 539
Query: 244 MQEVQAR--VQSLESMPRPPEQRPQPRPSARPW----------PLGLPGPALL 284
Q+V AR +Q L+ +RPQ P W P PGP+LL
Sbjct: 540 QQDVMARACLQKLKGTTELLPKRPQHLPGHPGWYRKLCPRLDDPAWTPGPSLL 592
>gi|144226847 obscurin-like 1 [Homo sapiens]
Length = 1896
Score = 35.0 bits (79), Expect = 0.083
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 22/156 (14%)
Query: 146 NGDVGAVSEPPCLPKEPAPPSPESHSPRDLDSEVFCDSLEQLEPELVWT---EQRAASGG 202
+GD G+ PPC + P P S + ++E+ C L + P +VW +Q AAS
Sbjct: 5 SGDQGS---PPCFLRFPRPVRVVSGA----EAELKCVVLGEPPPVVVWEKGGQQLAASER 57
Query: 203 KRDPRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRALQESMQEVQARVQSLESMPRPPE 262
P + + GL + P + V++ A E+ A V LE PP
Sbjct: 58 LSFPADGA-----EHGLLLTAALPTDAGVYVCRARNAAGEAY--AAAAVTVLE----PPA 106
Query: 263 QRPQPRPSARPWPLGLPGPALLFFLLWPFVVQWLFR 298
P+ +P+ RP P G FL P QW+ R
Sbjct: 107 SDPELQPAERPLPSPGSGEGAPVFLTGP-RSQWVLR 141
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 35.0 bits (79), Expect = 0.083
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 210 PVPPTKKEGLRGSPPGPQELDVWLLGTVRALQESMQEV--QARVQSLESMPRPPEQRPQP 267
P P + L G PG LL + Q+S+QE Q + + L+ + Q+ QP
Sbjct: 3343 PYSPALSQALMGLSPGS------LLQQYQQYQQSLQEAIQQQQQRQLQQQQQQKVQQQQP 3396
Query: 268 RPSARPWPLGLPGP 281
+ S P P G P P
Sbjct: 3397 KASQTPVPPGAPSP 3410
Score = 28.9 bits (63), Expect = 5.9
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 245 QEVQARVQSLESMPRPPEQRPQPRPSARPWPLGLPGPALLFFL 287
Q+ ++ SL S+P+PP Q P P+ P P P P+ L L
Sbjct: 2468 QQKLPQLVSLPSLPQPPPQAPPPQ---CPLPQSSPSPSQLSHL 2507
>gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]
Length = 621
Score = 35.0 bits (79), Expect = 0.083
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 239 ALQESMQEVQARVQSLESMPRPPEQRPQPRP-----SARPWPLGLPGPAL 283
A + QE QA V+++E P PP Q P P P A P P + PAL
Sbjct: 288 AAYKDNQECQATVETVELDPAPPSQTPSPPPMATVDPASPAPASIEPPAL 337
>gi|33300670 hypothetical protein LOC84331 [Homo sapiens]
Length = 160
Score = 34.7 bits (78), Expect = 0.11
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 243 SMQEVQARVQSLES--MPRPP-EQRPQPRPSARP---WPLGLPGPALLF 285
+ Q+V+ R+ L P PP Q P+ +P A+P WPL PGP L+F
Sbjct: 20 TQQQVEGRLGELLKCRQPAPPTSQPPRAQPFAQPPGPWPLSSPGPRLVF 68
>gi|28558977 mediator complex subunit 26 [Homo sapiens]
Length = 600
Score = 34.3 bits (77), Expect = 0.14
Identities = 45/160 (28%), Positives = 61/160 (38%), Gaps = 27/160 (16%)
Query: 125 DMPRPPETFLRRVTGWKEQVVNGDVGAVSEPPCLPKEPAPPSPESHSPRDLDS-----EV 179
D+ R P L R+ K + D+G PP + K P + SP + E
Sbjct: 132 DLQRLPGQRLDRLGSRKRRGDQRDLGHPGPPPKVSKASHDPLVPNSSPLPTNGISGSPES 191
Query: 180 FCDSLE---QLEPE---LVWTEQRAASGGKRDPRNSPVPPTKKEGLRGSPPGPQELDVWL 233
F SL+ PE L E SG + P N+ P T GL G PPGP
Sbjct: 192 FASSLDGSGHAGPEGSRLERDENDKHSG--KIPVNAVRPHTSSPGL-GKPPGP------- 241
Query: 234 LGTVRALQESMQEVQARVQSLESMPRPPEQRPQPRPSARP 273
LQ +Q ++ ++ P PP + PR S P
Sbjct: 242 -----CLQPKASVLQ-QLDRVDETPGPPHPKGPPRCSFSP 275
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 34.3 bits (77), Expect = 0.14
Identities = 34/130 (26%), Positives = 44/130 (33%), Gaps = 25/130 (19%)
Query: 162 PAPPSPESHSPRDLDSEVFCDSLEQLEPELVWTEQRAASGGKRDPRNSPVPPTKKEGL-R 220
PAPP P + P + T Q S + P SP PPT+ G
Sbjct: 638 PAPPKPGNPPPGHPGGQSSSG-----------TSQHPPSLSPKPPTRSPSPPTQHTGQPP 686
Query: 221 GSPPGPQELDVWLLGTVRALQESMQEVQA--------RVQSLESMPRPPEQRPQPRPSAR 272
G P P + L R S+ +QA Q+ M P + P P A
Sbjct: 687 GQPSAPSQ-----LSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMAL 741
Query: 273 PWPLGLPGPA 282
P GL P+
Sbjct: 742 PSEHGLEQPS 751
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 34.3 bits (77), Expect = 0.14
Identities = 34/130 (26%), Positives = 44/130 (33%), Gaps = 25/130 (19%)
Query: 162 PAPPSPESHSPRDLDSEVFCDSLEQLEPELVWTEQRAASGGKRDPRNSPVPPTKKEGL-R 220
PAPP P + P + T Q S + P SP PPT+ G
Sbjct: 560 PAPPKPGNPPPGHPGGQSSSG-----------TSQHPPSLSPKPPTRSPSPPTQHTGQPP 608
Query: 221 GSPPGPQELDVWLLGTVRALQESMQEVQA--------RVQSLESMPRPPEQRPQPRPSAR 272
G P P + L R S+ +QA Q+ M P + P P A
Sbjct: 609 GQPSAPSQ-----LSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMAL 663
Query: 273 PWPLGLPGPA 282
P GL P+
Sbjct: 664 PSEHGLEQPS 673
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 33.9 bits (76), Expect = 0.18
Identities = 38/143 (26%), Positives = 57/143 (39%), Gaps = 39/143 (27%)
Query: 155 PPCLP--KEPAPP-SPESHSPR---DLDSEVFCDSLEQLEPELVWTE---------QRAA 199
PP P ++P PP SPE SP +L L +L P+ T Q+++
Sbjct: 413 PPVSPELRKPGPPLSPEIRSPAGSPELRKPSGSPDLWKLSPDQRKTSPASLDFPESQKSS 472
Query: 200 SGGKRD---------PRNSPVPPTKKEGLRGSPPGPQELDVWLLGTVRALQESMQEVQAR 250
GG D P+ P T+K G P GP E ++ ++
Sbjct: 473 RGGSPDLWKSSFFIEPQKPVFPETRKPG----PSGPSESP-----------KAASDIWKP 517
Query: 251 VQSLESMPRPPEQRPQPRPSARP 273
V S+++ PR P P+P +A P
Sbjct: 518 VLSIDTEPRKPALFPEPAKTAPP 540
Score = 28.9 bits (63), Expect = 5.9
Identities = 36/139 (25%), Positives = 52/139 (37%), Gaps = 16/139 (11%)
Query: 159 PKEPAPPSPES-----HSPRDLDSEVFCDSLEQLEPELVWTEQRAASGGKRDPRNSPVPP 213
P++PAP SPES +P+ F ++L + AAS P + P
Sbjct: 207 PQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPE 266
Query: 214 TKKEGLRGSP----PGPQEL-DVWLLGTVRALQESMQEVQARVQSLESMPRPP-EQRP-- 265
++K SP P P E + W A+ + V P PP RP
Sbjct: 267 SRKSARTTSPEPRKPSPSESPEPW--KPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWK 324
Query: 266 -QPRPSARPWPLGLPGPAL 283
P S+ PW P P++
Sbjct: 325 SNPSASSGPWKPAKPAPSV 343
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,926,576
Number of Sequences: 37866
Number of extensions: 936749
Number of successful extensions: 7858
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 257
Number of HSP's that attempted gapping in prelim test: 7049
Number of HSP's gapped (non-prelim): 1000
length of query: 305
length of database: 18,247,518
effective HSP length: 102
effective length of query: 203
effective length of database: 14,385,186
effective search space: 2920192758
effective search space used: 2920192758
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.