Guide to the Human Genome
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Name: ACSS3 Sequence: fasta or formatted (686aa) NCBI GI: 13375727
Description:

acyl-CoA synthetase short-chain family member 3

Referenced in:

Fatty Acid Synthesis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         59           2
 C cysteine            1.6         11           1
 D aspartate           3.9         27           2
 E glutamate           5.5         38           2
 F phenylalanine       2.8         19           1
 G glycine             9.9         68           2
 H histidine           2.9         20           1
 I isoleucine          5.5         38           2
 K lysine              6.6         45           2
 L leucine             8.0         55           2
 M methionine          2.3         16           1
 N asparagine          2.8         19           1
 P proline             6.7         46           3
 Q glutamine           2.6         18           2
 R arginine            4.4         30           2
 S serine              6.3         43           2
 T threonine           5.1         35           2
 V valine              8.6         59           3
 W tryptophan          2.0         14           2
 Y tyrosine            3.8         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-CoA synthetase short-chain family member 3 [Hom... 
ACSS1                 0.250   acyl-CoA synthetase short-chain family member 1 [Hom...
ACSS2                 0.245   acyl-CoA synthetase short-chain family member 2 isofo...
ACSS2                 0.242   acyl-CoA synthetase short-chain family member 2 iso...
ACSM1                 0.103   acyl-CoA synthetase medium-chain family member 1 [H...
ACSM5                 0.102   acyl-CoA synthetase medium-chain family member 5 [Ho...
ACSM3                 0.099   SA hypertension-associated homolog isoform 1 
ACSM4                 0.098   acyl-CoA synthetase medium-chain family member 4 [H...
ACSM2A                0.097   acyl-CoA synthetase medium-chain family member 2A [H...
ACSM2B                0.096   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2B                0.096   acyl-CoA synthetase medium-chain family member 2B [...
LOC100291873          0.082   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
LOC100291873          0.082   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
AACS                  0.068   acetoacetyl-CoA synthetase 
C10orf129             0.048   acyl-coenzyme A synthetase ACSM6, mitochondrial [Ho...
ACSM3                 0.036   SA hypertension-associated homolog isoform 2 
ACSF3                 0.033   acyl-CoA synthetase family member 3 
ACSF3                 0.033   acyl-CoA synthetase family member 3 
ACSF2                 0.032   acyl-CoA synthetase family member 2 
SLC27A6               0.024   solute carrier family 27 (fatty acid transporter), m...
SLC27A6               0.024   solute carrier family 27 (fatty acid transporter), m...
SLC27A4               0.022   solute carrier family 27 (fatty acid transporter), m...
ACSBG1                0.012   lipidosin 
SLC27A2               0.010   solute carrier family 27 (fatty acid transporter), ...
SLC27A1               0.008   solute carrier family 27, member 1 
SMARCD2               0.008   SWI/SNF-related matrix-associated actin-dependent r...
AASDH                 0.007   aminoadipate-semialdehyde dehydrogenase 
SLC27A5               0.007   solute carrier family 27 (fatty acid transporter), m...
KRT19                 0.006   keratin 19 
OAT                   0.006   ornithine aminotransferase precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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