Guide to the Human Genome
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Name: SLC27A5 Sequence: fasta or formatted (690aa) NCBI GI: 13325057
Description:

solute carrier family 27 (fatty acid transporter), member 5

Referenced in:

Bile Acids and Other Cholesterol Derivatives
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         64           4
 C cysteine            2.8         19           2
 D aspartate           4.2         29           2
 E glutamate           4.3         30           2
 F phenylalanine       3.5         24           1
 G glycine             9.4         65           1
 H histidine           1.9         13           1
 I isoleucine          2.6         18           1
 K lysine              2.3         16           1
 L leucine            14.9        103           9
 M methionine          2.5         17           1
 N asparagine          1.9         13           1
 P proline             6.8         47           2
 Q glutamine           4.1         28           2
 R arginine            6.5         45           2
 S serine              4.2         29           2
 T threonine           5.1         35           2
 V valine              9.0         62           2
 W tryptophan          2.5         17           1
 Y tyrosine            2.3         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 27 (fatty acid transporter), m... 
SLC27A2               0.386   solute carrier family 27 (fatty acid transporter), ...
SLC27A6               0.341   solute carrier family 27 (fatty acid transporter), m...
SLC27A6               0.341   solute carrier family 27 (fatty acid transporter), m...
SLC27A3               0.337   solute carrier family 27 member 3 
SLC27A2               0.332   solute carrier family 27 (fatty acid transporter), ...
SLC27A1               0.254   solute carrier family 27, member 1 
SLC27A4               0.251   solute carrier family 27 (fatty acid transporter), m...
ACSF3                 0.045   acyl-CoA synthetase family member 3 
ACSF3                 0.045   acyl-CoA synthetase family member 3 
ACSF2                 0.040   acyl-CoA synthetase family member 2 
ACSM1                 0.027   acyl-CoA synthetase medium-chain family member 1 [H...
ACSM2B                0.025   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2B                0.025   acyl-CoA synthetase medium-chain family member 2B [...
ACSM4                 0.023   acyl-CoA synthetase medium-chain family member 4 [H...
ACSS2                 0.023   acyl-CoA synthetase short-chain family member 2 iso...
ACSS2                 0.023   acyl-CoA synthetase short-chain family member 2 isofo...
ACSM5                 0.022   acyl-CoA synthetase medium-chain family member 5 [Ho...
ACSM2A                0.022   acyl-CoA synthetase medium-chain family member 2A [H...
ACSM3                 0.020   SA hypertension-associated homolog isoform 1 
LOC100291873          0.020   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
LOC100291873          0.020   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
AASDH                 0.016   aminoadipate-semialdehyde dehydrogenase 
ACSS1                 0.015   acyl-CoA synthetase short-chain family member 1 [Hom...
ACSBG2                0.013   bubblegum-related acyl-CoA synthetase 2 
ACSL3                 0.013   acyl-CoA synthetase long-chain family member 3 [Homo...
ACSL3                 0.013   acyl-CoA synthetase long-chain family member 3 [Homo...
ACSL1                 0.012   acyl-CoA synthetase long-chain family member 1 [Homo...
ACSL4                 0.011   acyl-CoA synthetase long-chain family member 4 isofor...
ACSL4                 0.011   acyl-CoA synthetase long-chain family member 4 isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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