Guide to the Human Genome
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Name: ACSM3 Sequence: fasta or formatted (586aa) NCBI GI: 42544132
Description:

SA hypertension-associated homolog isoform 1

Referenced in:

Xenobiotic Pathways

Other entries for this name:
alt prot [438aa] SA hypertension-associated homolog isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         34           1
 C cysteine            1.7         10           1
 D aspartate           4.8         28           2
 E glutamate           5.5         32           2
 F phenylalanine       4.8         28           2
 G glycine             6.5         38           1
 H histidine           2.6         15           2
 I isoleucine          5.6         33           2
 K lysine              8.0         47           2
 L leucine             7.5         44           1
 M methionine          2.0         12           1
 N asparagine          4.9         29           1
 P proline             5.6         33           2
 Q glutamine           3.1         18           1
 R arginine            4.8         28           1
 S serine              7.8         46           2
 T threonine           6.7         39           2
 V valine              6.8         40           2
 W tryptophan          2.6         15           2
 Y tyrosine            2.9         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SA hypertension-associated homolog isoform 1 
ACSM3                 0.695   SA hypertension-associated homolog isoform 2 
ACSM4                 0.614   acyl-CoA synthetase medium-chain family member 4 [H...
ACSM5                 0.599   acyl-CoA synthetase medium-chain family member 5 [Ho...
ACSM2A                0.529   acyl-CoA synthetase medium-chain family member 2A [H...
ACSM2B                0.522   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2B                0.522   acyl-CoA synthetase medium-chain family member 2B [...
ACSM1                 0.509   acyl-CoA synthetase medium-chain family member 1 [H...
LOC100291873          0.478   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
LOC100291873          0.478   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
C10orf129             0.341   acyl-coenzyme A synthetase ACSM6, mitochondrial [Ho...
ACSS2                 0.136   acyl-CoA synthetase short-chain family member 2 isofo...
ACSS2                 0.132   acyl-CoA synthetase short-chain family member 2 iso...
ACSS1                 0.126   acyl-CoA synthetase short-chain family member 1 [Hom...
ACSS3                 0.116   acyl-CoA synthetase short-chain family member 3 [Hom...
ACSF3                 0.089   acyl-CoA synthetase family member 3 
ACSF3                 0.089   acyl-CoA synthetase family member 3 
ACSF2                 0.064   acyl-CoA synthetase family member 2 
SLC27A1               0.042   solute carrier family 27, member 1 
SLC27A4               0.041   solute carrier family 27 (fatty acid transporter), m...
SLC27A6               0.035   solute carrier family 27 (fatty acid transporter), m...
SLC27A6               0.035   solute carrier family 27 (fatty acid transporter), m...
ACSL1                 0.030   acyl-CoA synthetase long-chain family member 1 [Homo...
ACSL6                 0.029   acyl-CoA synthetase long-chain family member 6 isofo...
ACSL6                 0.029   acyl-CoA synthetase long-chain family member 6 isofo...
SLC27A3               0.028   solute carrier family 27 member 3 
SLC27A2               0.024   solute carrier family 27 (fatty acid transporter), ...
SLC27A5               0.024   solute carrier family 27 (fatty acid transporter), m...
ACSL5                 0.022   acyl-CoA synthetase long-chain family member 5 isofo...
ACSL5                 0.022   acyl-CoA synthetase long-chain family member 5 isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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