Guide to the Human Genome
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Name: ACSM2A Sequence: fasta or formatted (577aa) NCBI GI: 58082049
Description:

acyl-CoA synthetase medium-chain family member 2A

Referenced in:

Xenobiotic Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         39           2
 C cysteine            1.9         11           1
 D aspartate           5.0         29           2
 E glutamate           5.4         31           1
 F phenylalanine       2.8         16           1
 G glycine             7.8         45           1
 H histidine           1.9         11           2
 I isoleucine          5.9         34           2
 K lysine              6.6         38           2
 L leucine            10.1         58           2
 M methionine          3.5         20           2
 N asparagine          2.9         17           1
 P proline             5.0         29           2
 Q glutamine           4.5         26           2
 R arginine            4.3         25           1
 S serine              7.8         45           2
 T threonine           5.4         31           2
 V valine              6.9         40           2
 W tryptophan          2.9         17           2
 Y tyrosine            2.6         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-CoA synthetase medium-chain family member 2A [H... 
ACSM2B                0.978   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2B                0.978   acyl-CoA synthetase medium-chain family member 2B [...
LOC100291873          0.916   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
LOC100291873          0.916   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
ACSM4                 0.572   acyl-CoA synthetase medium-chain family member 4 [H...
ACSM1                 0.557   acyl-CoA synthetase medium-chain family member 1 [H...
ACSM3                 0.545   SA hypertension-associated homolog isoform 1 
ACSM5                 0.542   acyl-CoA synthetase medium-chain family member 5 [Ho...
ACSM3                 0.325   SA hypertension-associated homolog isoform 2 
C10orf129             0.307   acyl-coenzyme A synthetase ACSM6, mitochondrial [Ho...
ACSS1                 0.119   acyl-CoA synthetase short-chain family member 1 [Hom...
ACSS3                 0.116   acyl-CoA synthetase short-chain family member 3 [Hom...
ACSS2                 0.111   acyl-CoA synthetase short-chain family member 2 isofo...
ACSS2                 0.110   acyl-CoA synthetase short-chain family member 2 iso...
ACSF3                 0.085   acyl-CoA synthetase family member 3 
ACSF3                 0.085   acyl-CoA synthetase family member 3 
ACSF2                 0.076   acyl-CoA synthetase family member 2 
SLC27A1               0.064   solute carrier family 27, member 1 
SLC27A3               0.046   solute carrier family 27 member 3 
SLC27A4               0.045   solute carrier family 27 (fatty acid transporter), m...
SLC27A2               0.031   solute carrier family 27 (fatty acid transporter), ...
SLC27A6               0.030   solute carrier family 27 (fatty acid transporter), m...
SLC27A6               0.030   solute carrier family 27 (fatty acid transporter), m...
ACSL6                 0.030   acyl-CoA synthetase long-chain family member 6 isofo...
ACSL6                 0.030   acyl-CoA synthetase long-chain family member 6 isofo...
ACSL1                 0.030   acyl-CoA synthetase long-chain family member 1 [Homo...
LOC100132247          0.029   hypothetical protein LOC100132247 
LOC728888             0.029   PREDICTED: similar to acyl-CoA synthetase medium-ch...
LOC728741             0.029   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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