Guide to the Human Genome
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Name: C10orf129 Sequence: fasta or formatted (480aa) NCBI GI: 195947378
Description:

acyl-coenzyme A synthetase ACSM6, mitochondrial

Referenced in:

Xenobiotic Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         34           2
 C cysteine            3.3         16           2
 D aspartate           4.8         23           2
 E glutamate           4.2         20           2
 F phenylalanine       4.2         20           2
 G glycine             7.1         34           2
 H histidine           1.0          5           1
 I isoleucine          4.6         22           2
 K lysine              6.2         30           2
 L leucine            10.4         50           2
 M methionine          3.1         15           1
 N asparagine          2.5         12           1
 P proline             6.7         32           2
 Q glutamine           5.2         25           1
 R arginine            4.6         22           2
 S serine              7.9         38           2
 T threonine           5.6         27           2
 V valine              5.4         26           2
 W tryptophan          2.5         12           2
 Y tyrosine            3.5         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-coenzyme A synthetase ACSM6, mitochondrial [Ho... 
ACSM4                 0.440   acyl-CoA synthetase medium-chain family member 4 [H...
ACSM3                 0.417   SA hypertension-associated homolog isoform 1 
ACSM5                 0.408   acyl-CoA synthetase medium-chain family member 5 [Ho...
ACSM1                 0.366   acyl-CoA synthetase medium-chain family member 1 [H...
ACSM2B                0.366   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2B                0.366   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2A                0.365   acyl-CoA synthetase medium-chain family member 2A [H...
ACSM3                 0.341   SA hypertension-associated homolog isoform 2 
LOC100291873          0.330   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
LOC100291873          0.330   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
ACSS1                 0.068   acyl-CoA synthetase short-chain family member 1 [Hom...
ACSS3                 0.068   acyl-CoA synthetase short-chain family member 3 [Hom...
ACSS2                 0.055   acyl-CoA synthetase short-chain family member 2 isofo...
ACSF2                 0.054   acyl-CoA synthetase family member 2 
ACSS2                 0.053   acyl-CoA synthetase short-chain family member 2 iso...
ACSF3                 0.038   acyl-CoA synthetase family member 3 
ACSF3                 0.038   acyl-CoA synthetase family member 3 
SLC27A2               0.036   solute carrier family 27 (fatty acid transporter), ...
SLC27A1               0.027   solute carrier family 27, member 1 
DIP2A                 0.021   disco-interacting protein 2A isoform g 
DIP2A                 0.021   disco-interacting protein 2A isoform a 
ACSL1                 0.020   acyl-CoA synthetase long-chain family member 1 [Homo...
DIP2A                 0.019   disco-interacting protein 2A isoform e 
SLC27A4               0.018   solute carrier family 27 (fatty acid transporter), m...
SLC27A6               0.018   solute carrier family 27 (fatty acid transporter), m...
SLC27A6               0.018   solute carrier family 27 (fatty acid transporter), m...
ACSL6                 0.018   acyl-CoA synthetase long-chain family member 6 isofo...
ACSL6                 0.018   acyl-CoA synthetase long-chain family member 6 isofo...
SLC27A3               0.015   solute carrier family 27 member 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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