Guide to the Human Genome
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Name: AACS Sequence: fasta or formatted (672aa) NCBI GI: 31982927
Description:

acetoacetyl-CoA synthetase

Referenced in:

Cholesterol Biosynthesis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         45           3
 C cysteine            1.5         10           1
 D aspartate           4.3         29           2
 E glutamate           7.7         52           2
 F phenylalanine       4.2         28           1
 G glycine             7.9         53           2
 H histidine           2.5         17           1
 I isoleucine          5.7         38           2
 K lysine              6.1         41           2
 L leucine             8.9         60           2
 M methionine          3.1         21           2
 N asparagine          3.9         26           1
 P proline             4.6         31           1
 Q glutamine           3.0         20           2
 R arginine            4.2         28           1
 S serine              7.7         52           2
 T threonine           4.0         27           2
 V valine              8.3         56           3
 W tryptophan          2.2         15           1
 Y tyrosine            3.4         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acetoacetyl-CoA synthetase 
ACSS2                 0.135   acyl-CoA synthetase short-chain family member 2 isofo...
ACSS2                 0.131   acyl-CoA synthetase short-chain family member 2 iso...
ACSS1                 0.110   acyl-CoA synthetase short-chain family member 1 [Hom...
ACSS3                 0.070   acyl-CoA synthetase short-chain family member 3 [Hom...
ACSM4                 0.030   acyl-CoA synthetase medium-chain family member 4 [H...
ACSF2                 0.030   acyl-CoA synthetase family member 2 
ACSM5                 0.028   acyl-CoA synthetase medium-chain family member 5 [Ho...
ACSM2B                0.023   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2B                0.023   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2A                0.023   acyl-CoA synthetase medium-chain family member 2A [H...
LOC100291873          0.019   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
LOC100291873          0.019   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
ACSM1                 0.017   acyl-CoA synthetase medium-chain family member 1 [H...
ACSM3                 0.016   SA hypertension-associated homolog isoform 1 
AASDH                 0.012   aminoadipate-semialdehyde dehydrogenase 
C10orf129             0.010   acyl-coenzyme A synthetase ACSM6, mitochondrial [Ho...
SLC27A2               0.009   solute carrier family 27 (fatty acid transporter), ...
ACSBG1                0.009   lipidosin 
ARAP1                 0.007   ArfGAP with RhoGAP domain, ankyrin repeat and PH do...
ARAP1                 0.007   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
SLC27A2               0.007   solute carrier family 27 (fatty acid transporter), ...
SLC27A6               0.007   solute carrier family 27 (fatty acid transporter), m...
SLC27A6               0.007   solute carrier family 27 (fatty acid transporter), m...
ACSM3                 0.005   SA hypertension-associated homolog isoform 2 
ARAP1                 0.005   ArfGAP with RhoGAP domain, ankyrin repeat and PH do...
KIAA0020              0.005   KIAA0020 protein 
APPBP2                0.005   amyloid beta precursor protein-binding protein 2 [Ho...
TDRKH                 0.005   tudor and KH domain containing isoform a 
TDRKH                 0.005   tudor and KH domain containing isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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