Guide to the Human Genome
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Name: ACSM2B Sequence: fasta or formatted (577aa) NCBI GI: 157311622
Description:

acyl-CoA synthetase medium-chain family member 2B

Referenced in:

Xenobiotic Pathways

Other entries for this name:
alt mRNA [577aa] acyl-CoA synthetase medium-chain family member 2B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         38           2
 C cysteine            1.7         10           1
 D aspartate           4.9         28           2
 E glutamate           5.4         31           1
 F phenylalanine       2.9         17           1
 G glycine             8.1         47           2
 H histidine           1.9         11           2
 I isoleucine          6.1         35           2
 K lysine              6.8         39           2
 L leucine            10.4         60           2
 M methionine          3.5         20           2
 N asparagine          2.9         17           1
 P proline             4.9         28           2
 Q glutamine           4.5         26           2
 R arginine            4.3         25           1
 S serine              7.8         45           2
 T threonine           5.5         32           2
 V valine              6.2         36           2
 W tryptophan          2.9         17           2
 Y tyrosine            2.6         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-CoA synthetase medium-chain family member 2B [... 
ACSM2B                1.000   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2A                0.978   acyl-CoA synthetase medium-chain family member 2A [H...
LOC100291873          0.937   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
LOC100291873          0.937   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
ACSM4                 0.574   acyl-CoA synthetase medium-chain family member 4 [H...
ACSM1                 0.555   acyl-CoA synthetase medium-chain family member 1 [H...
ACSM5                 0.540   acyl-CoA synthetase medium-chain family member 5 [Ho...
ACSM3                 0.538   SA hypertension-associated homolog isoform 1 
ACSM3                 0.321   SA hypertension-associated homolog isoform 2 
C10orf129             0.308   acyl-coenzyme A synthetase ACSM6, mitochondrial [Ho...
ACSS3                 0.115   acyl-CoA synthetase short-chain family member 3 [Hom...
ACSS1                 0.109   acyl-CoA synthetase short-chain family member 1 [Hom...
ACSS2                 0.101   acyl-CoA synthetase short-chain family member 2 isofo...
ACSS2                 0.100   acyl-CoA synthetase short-chain family member 2 iso...
ACSF3                 0.084   acyl-CoA synthetase family member 3 
ACSF3                 0.084   acyl-CoA synthetase family member 3 
ACSF2                 0.076   acyl-CoA synthetase family member 2 
SLC27A1               0.070   solute carrier family 27, member 1 
SLC27A4               0.053   solute carrier family 27 (fatty acid transporter), m...
SLC27A3               0.044   solute carrier family 27 member 3 
SLC27A2               0.036   solute carrier family 27 (fatty acid transporter), ...
SLC27A6               0.034   solute carrier family 27 (fatty acid transporter), m...
SLC27A6               0.034   solute carrier family 27 (fatty acid transporter), m...
ACSL1                 0.030   acyl-CoA synthetase long-chain family member 1 [Homo...
ACSL6                 0.030   acyl-CoA synthetase long-chain family member 6 isofo...
ACSL6                 0.030   acyl-CoA synthetase long-chain family member 6 isofo...
SLC27A5               0.030   solute carrier family 27 (fatty acid transporter), m...
LOC100132247          0.028   hypothetical protein LOC100132247 
LOC728888             0.028   PREDICTED: similar to acyl-CoA synthetase medium-ch...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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