Search of human proteins with 4826649

Search of human proteins with 4826649

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4826649 mitochondrial ribosomal protein L49 [Homo sapiens]
         (166 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4826649 mitochondrial ribosomal protein L49 [Homo sapiens]         353   4e-98
gi|125987593 leukocyte immunoglobulin-like receptor, subfamily B...    33   0.11 
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         33   0.15 
gi|4504421 hepatic leukemia factor [Homo sapiens]                      32   0.19 
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    32   0.33 
gi|166197696 hypothetical protein LOC128344 [Homo sapiens]             31   0.43 
gi|14602439 Williams Beuren syndrome chromosome region 14 isofor...    31   0.56 
gi|14602437 Williams Beuren syndrome chromosome region 14 isofor...    31   0.56 
gi|14602435 Williams Beuren syndrome chromosome region 14 isofor...    31   0.56 
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor...    31   0.56 
gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo s...    31   0.56 
gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo sa...    31   0.56 
gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]                      31   0.56 
gi|157412247 RUN and SH3 domain containing 1 isoform b [Homo sap...    30   0.73 
gi|157412245 RUN and SH3 domain containing 1 isoform a [Homo sap...    30   0.73 
gi|169172231 PREDICTED: hypothetical protein [Homo sapiens]            30   0.73 
gi|169170975 PREDICTED: hypothetical protein [Homo sapiens]            30   0.73 
gi|134288915 myosin IIIB isoform 1 [Homo sapiens]                      30   0.73 
gi|134288892 myosin IIIB isoform 2 [Homo sapiens]                      30   0.73 
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]    30   1.2  
gi|157041215 SPR1 protein [Homo sapiens]                               30   1.2  
gi|13654239 WW domain containing E3 ubiquitin protein ligase 1 [...    29   1.6  
gi|110624765 POU domain, class 3, transcription factor 1 [Homo s...    29   1.6  
gi|110349719 titin isoform N2-A [Homo sapiens]                         29   2.1  
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                     29   2.1  
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                     29   2.1  
gi|11386183 WAS protein family, member 2 [Homo sapiens]                29   2.1  
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H...    29   2.1  
gi|7706501 WW domain binding protein 11 [Homo sapiens]                 29   2.1  
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         29   2.1  

>gi|4826649 mitochondrial ribosomal protein L49 [Homo sapiens]
          Length = 166

 Score =  353 bits (906), Expect = 4e-98
 Identities = 166/166 (100%), Positives = 166/166 (100%)

Query: 1   MAATMFRATLRGWRTGVQRGCGLRLLSQTQGPPDYPRFVESVDEYQFVERLLPATRIPDP 60
           MAATMFRATLRGWRTGVQRGCGLRLLSQTQGPPDYPRFVESVDEYQFVERLLPATRIPDP
Sbjct: 1   MAATMFRATLRGWRTGVQRGCGLRLLSQTQGPPDYPRFVESVDEYQFVERLLPATRIPDP 60

Query: 61  PKHEHYPTPSGWQPPRDPPPNLPYFVRRSRMHNIPVYKDITHGNRQMTVIRKVEGDIWAL 120
           PKHEHYPTPSGWQPPRDPPPNLPYFVRRSRMHNIPVYKDITHGNRQMTVIRKVEGDIWAL
Sbjct: 61  PKHEHYPTPSGWQPPRDPPPNLPYFVRRSRMHNIPVYKDITHGNRQMTVIRKVEGDIWAL 120

Query: 121 QKDVEDFLSPLLGKTPVTQVNEVTGTLRIKGYFDQELKAWLLEKGF 166
           QKDVEDFLSPLLGKTPVTQVNEVTGTLRIKGYFDQELKAWLLEKGF
Sbjct: 121 QKDVEDFLSPLLGKTPVTQVNEVTGTLRIKGYFDQELKAWLLEKGF 166


>gi|125987593 leukocyte immunoglobulin-like receptor, subfamily B,
           member 5 isoform 3 [Homo sapiens]
          Length = 491

 Score = 33.1 bits (74), Expect = 0.11
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 1/84 (1%)

Query: 65  HYPTPSGWQPPRDPPPNLPYFVRRSRMHNIPVYKDITHGNRQMTVIRKVEG-DIWALQKD 123
           +Y TP+GW  P DP   +   V R     IP    +  G       R   G DI+ L K+
Sbjct: 99  YYETPAGWSEPSDPLELVATGVSRKPSLLIPQGSVVARGGSLTLQCRSDVGYDIFVLYKE 158

Query: 124 VEDFLSPLLGKTPVTQVNEVTGTL 147
            E  L    G+ P   +++   TL
Sbjct: 159 GEHDLVQGSGQQPQAGLSQANFTL 182


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 49  ERLLPATRIPDPPKHEHYPTPSGWQPPRDPPPN 81
           E   P   +P PP    +P PS  QPP  PPP+
Sbjct: 767 EEKKPPPALPPPPPLAKFPPPSQPQPPPPPPPS 799


>gi|4504421 hepatic leukemia factor [Homo sapiens]
          Length = 295

 Score = 32.3 bits (72), Expect = 0.19
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 44  EYQFVERLLPATRIP-DPPKHEHYPTPSGWQPPRDPPPNLPYFVRRSRMHNIPVYKDITH 102
           EY  +E  L    IP  P +H+H P P G QP     P++     R+   + P++  I  
Sbjct: 84  EYMDLEEFLSENGIPPSPSQHDHSPHPPGLQPASSAAPSVMDLSSRA---SAPLHPGIPS 140

Query: 103 GNRQMTVIR 111
            N   + IR
Sbjct: 141 PNCMQSPIR 149


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
          tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 53 PATRIPDPPKHEHYPTPSGWQ-PPRDPPPNLP 83
          P   IP PP H+    P   Q PP+ PPP+ P
Sbjct: 56 PKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQP 87


>gi|166197696 hypothetical protein LOC128344 [Homo sapiens]
          Length = 191

 Score = 31.2 bits (69), Expect = 0.43
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 56  RIPDPPKHEHYPTPSGWQPPRDPPPNLPY 84
           R  + PK  +YP+P  + P + PPP + +
Sbjct: 118 RFKNYPKDTYYPSPGAYNPEKKPPPKIAW 146


>gi|14602439 Williams Beuren syndrome chromosome region 14 isoform
           delta [Homo sapiens]
          Length = 831

 Score = 30.8 bits (68), Expect = 0.56
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 33  PDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYPTPSGWQPPRD 77
           PD      S+D++  +      +R+P PP   ++P P  + P  D
Sbjct: 284 PDLTPLQPSLDDFMDISDFFTNSRLPQPPMPSNFPEPPSFSPVVD 328


>gi|14602437 Williams Beuren syndrome chromosome region 14 isoform
           gamma [Homo sapiens]
          Length = 850

 Score = 30.8 bits (68), Expect = 0.56
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 33  PDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYPTPSGWQPPRD 77
           PD      S+D++  +      +R+P PP   ++P P  + P  D
Sbjct: 284 PDLTPLQPSLDDFMDISDFFTNSRLPQPPMPSNFPEPPSFSPVVD 328


>gi|14602435 Williams Beuren syndrome chromosome region 14 isoform
           beta [Homo sapiens]
          Length = 833

 Score = 30.8 bits (68), Expect = 0.56
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 33  PDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYPTPSGWQPPRD 77
           PD      S+D++  +      +R+P PP   ++P P  + P  D
Sbjct: 284 PDLTPLQPSLDDFMDISDFFTNSRLPQPPMPSNFPEPPSFSPVVD 328


>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
           alpha [Homo sapiens]
          Length = 852

 Score = 30.8 bits (68), Expect = 0.56
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 33  PDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYPTPSGWQPPRD 77
           PD      S+D++  +      +R+P PP   ++P P  + P  D
Sbjct: 284 PDLTPLQPSLDDFMDISDFFTNSRLPQPPMPSNFPEPPSFSPVVD 328


>gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo
           sapiens]
          Length = 468

 Score = 30.8 bits (68), Expect = 0.56
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 10/67 (14%)

Query: 24  RLLSQTQGPPDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYPTPSGW-------QPPR 76
           +LL+++  PP  PR   +        R LPA  +P+ P     P+P+         +P  
Sbjct: 189 QLLARSPPPPHRPRLPSAES---LSRRPLPALPVPEAPSPSPVPSPAPGRKGSIQDRPLP 245

Query: 77  DPPPNLP 83
            PPP LP
Sbjct: 246 PPPPRLP 252


>gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo
           sapiens]
          Length = 561

 Score = 30.8 bits (68), Expect = 0.56
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 10/67 (14%)

Query: 24  RLLSQTQGPPDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYPTPSGW-------QPPR 76
           +LL+++  PP  PR   +        R LPA  +P+ P     P+P+         +P  
Sbjct: 282 QLLARSPPPPHRPRLPSAES---LSRRPLPALPVPEAPSPSPVPSPAPGRKGSIQDRPLP 338

Query: 77  DPPPNLP 83
            PPP LP
Sbjct: 339 PPPPRLP 345


>gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]
          Length = 547

 Score = 30.8 bits (68), Expect = 0.56
 Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 15/116 (12%)

Query: 33  PDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYPTPSGWQPPRDPPPNLPYFVRRSRMH 92
           P  P+ V++V        L P    P PP     P PS  + P  PPP  P         
Sbjct: 401 PKLPKKVQTVRS----RPLSPVATPPPPPPPPPPPPPSSQRLPPPPPPPPP--------- 447

Query: 93  NIPVYKDITHGNRQMTVIRKVEGDIWALQKDVEDFLSPLLGKTPVTQVNEVTGTLR 148
            +P  K IT    +  VI++ E    ALQ   +      + K P + + E+  +LR
Sbjct: 448 PLPEKKLITRNIAE--VIKQQESAQRALQNGQKKKKGKKVKKQPNSILKEIKNSLR 501


>gi|157412247 RUN and SH3 domain containing 1 isoform b [Homo
           sapiens]
          Length = 796

 Score = 30.4 bits (67), Expect = 0.73
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 7/60 (11%)

Query: 49  ERLLPATRIPDPPKHEHYPTPSGWQ--PPRDPPPNLPYFVRRSRMHNIPVYKDITHGNRQ 106
           + L   +R P PP     P P GW   PPR PPP +P      R  N P  + I  G  +
Sbjct: 372 KELRSRSRAPAPPVPPRDP-PVGWALVPPRPPPPPVP----PRRKKNRPGLQPIAEGQSE 426


>gi|157412245 RUN and SH3 domain containing 1 isoform a [Homo
           sapiens]
          Length = 902

 Score = 30.4 bits (67), Expect = 0.73
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 7/60 (11%)

Query: 49  ERLLPATRIPDPPKHEHYPTPSGWQ--PPRDPPPNLPYFVRRSRMHNIPVYKDITHGNRQ 106
           + L   +R P PP     P P GW   PPR PPP +P      R  N P  + I  G  +
Sbjct: 372 KELRSRSRAPAPPVPPRDP-PVGWALVPPRPPPPPVP----PRRKKNRPGLQPIAEGQSE 426


>gi|169172231 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 30.4 bits (67), Expect = 0.73
 Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 1/81 (1%)

Query: 8   ATLRGWRTGVQRGCGLRLLSQTQGPPDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYP 67
           AT+RGW  G  RG G R +S++      P F+           +        PP HE  P
Sbjct: 129 ATVRGWAGGYFRGDGGRGVSESVAVGTGPDFLLLSPPPPPPAEVAELPLSSAPPLHEEAP 188

Query: 68  TPSGWQPPRDPPPNLPYFVRR 88
              G  P   PP   P  VRR
Sbjct: 189 GVRG-LPRLAPPLPSPLLVRR 208


>gi|169170975 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 30.4 bits (67), Expect = 0.73
 Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 1/81 (1%)

Query: 8   ATLRGWRTGVQRGCGLRLLSQTQGPPDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYP 67
           AT+RGW  G  RG G R +S++      P F+           +        PP HE  P
Sbjct: 129 ATVRGWAGGYFRGDGGRGVSESVAVGTGPDFLLLSPPPPPPAEVAELPLSSAPPLHEEAP 188

Query: 68  TPSGWQPPRDPPPNLPYFVRR 88
              G  P   PP   P  VRR
Sbjct: 189 GVRG-LPRLAPPLPSPLLVRR 208


>gi|134288915 myosin IIIB isoform 1 [Homo sapiens]
          Length = 1314

 Score = 30.4 bits (67), Expect = 0.73
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 11/91 (12%)

Query: 59  DPPKHEHYPTPSGWQPPRDPPPNL----------PYFVRRSRMHNIPVYKDITHGNRQMT 108
           DPP  + +P  + ++ PR+PPP L           +F+ +  + +      +TH      
Sbjct: 233 DPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCEEFNHFISQCLIKDFERRPSVTH-LLDHP 291

Query: 109 VIRKVEGDIWALQKDVEDFLSPLLGKTPVTQ 139
            I+ V G +  LQK +   L     + PV +
Sbjct: 292 FIKGVHGKVLFLQKQLAKVLQDQKHQNPVAK 322


>gi|134288892 myosin IIIB isoform 2 [Homo sapiens]
          Length = 1341

 Score = 30.4 bits (67), Expect = 0.73
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 11/91 (12%)

Query: 59  DPPKHEHYPTPSGWQPPRDPPPNL----------PYFVRRSRMHNIPVYKDITHGNRQMT 108
           DPP  + +P  + ++ PR+PPP L           +F+ +  + +      +TH      
Sbjct: 233 DPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCEEFNHFISQCLIKDFERRPSVTH-LLDHP 291

Query: 109 VIRKVEGDIWALQKDVEDFLSPLLGKTPVTQ 139
            I+ V G +  LQK +   L     + PV +
Sbjct: 292 FIKGVHGKVLFLQKQLAKVLQDQKHQNPVAK 322


>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
          Length = 1684

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 10/77 (12%)

Query: 88  RSRMHNIPVYKDITHGNRQMTVIRKVEGDIWALQKDVEDFLSPLLGKTPVTQVNEVTGTL 147
           +S++  +P    I    +QM +I+K +     L+K++E+     L   PVT+     GT 
Sbjct: 19  KSKLETLPKEDLIKFAKKQMMLIQKAKSRCTELEKEIEE-----LRSKPVTE-----GTG 68

Query: 148 RIKGYFDQELKAWLLEK 164
            I     + L A LLEK
Sbjct: 69  DIIKALTERLDALLLEK 85


>gi|157041215 SPR1 protein [Homo sapiens]
          Length = 136

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 53  PATRIPDPPKHEHYPTPSGWQPPRDPPPNLP 83
           P T  P PP+ +  P P+G QPP +P P  P
Sbjct: 87  PRTDPPQPPRPDD-PWPAGPQPPENPWPPAP 116


>gi|13654239 WW domain containing E3 ubiquitin protein ligase 1
           [Homo sapiens]
          Length = 922

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 6/80 (7%)

Query: 32  PPDYPRFVESVDEYQFVERLLPATRIPDPPK---HEHYPTPSGWQPPRDPPPNLPYFVRR 88
           PP + + V+S D   FV      T+  DP         P P GW+  R     + YFV  
Sbjct: 459 PPGWEKRVDSTDRVYFVNHNTKTTQWEDPRTQGLQNEEPLPEGWE-IRYTREGVRYFVDH 517

Query: 89  SRMHNIPVYKDITHGNRQMT 108
           +       +KD  +G   +T
Sbjct: 518 NT--RTTTFKDPRNGKSSVT 535


>gi|110624765 POU domain, class 3, transcription factor 1 [Homo
           sapiens]
          Length = 451

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 6/53 (11%)

Query: 49  ERLLPATRIPDPPKHEHY------PTPSGWQPPRDPPPNLPYFVRRSRMHNIP 95
           +R+ PA     PP  + Y      P   G  PP  PPP  P  +     H +P
Sbjct: 395 KRMTPAAGAGHPPMDDVYAPGELGPGGGGASPPSAPPPPPPAALHHHHHHTLP 447


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 49   ERLLPATRIPDP-PKHEHYPTPSGWQPPRDPPPNLPYFVRRSRMHNIPVYKDITHGNRQM 107
            ++++P  ++P P PK E  P P   + P+ P P      +  +M   P+   +T  + Q+
Sbjct: 9585 KKIVPEKKVPAPVPKKEKVPPPKVPEEPKKPVPEKKVPPKVIKMEE-PLPAKVTERHMQI 9643

Query: 108  TVIRKV 113
            T   KV
Sbjct: 9644 TQEEKV 9649


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 17/41 (41%), Positives = 19/41 (46%)

Query: 55  TRIPDPPKHEHYPTPSGWQPPRDPPPNLPYFVRRSRMHNIP 95
           T IP PP      TP    PP  PPP LP  V  S   ++P
Sbjct: 585 TIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLP 625


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 17/41 (41%), Positives = 19/41 (46%)

Query: 55  TRIPDPPKHEHYPTPSGWQPPRDPPPNLPYFVRRSRMHNIP 95
           T IP PP      TP    PP  PPP LP  V  S   ++P
Sbjct: 594 TIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLP 634


>gi|11386183 WAS protein family, member 2 [Homo sapiens]
          Length = 498

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 16/63 (25%)

Query: 29  TQGPPDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYPT--------PSGWQPPRDPPP 80
           T  PP  P F    D          A   P PP    YPT        P+G  PP  PPP
Sbjct: 346 TPPPPSPPSFPPHPD--------FAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPP 397

Query: 81  NLP 83
             P
Sbjct: 398 PPP 400


>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
           sapiens]
          Length = 309

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 27  SQTQGPPDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYPTPSGWQPPRDPPPNLP 83
           +Q+QGPP  P   E        +   P    P P K +  P   G +P R PPP  P
Sbjct: 213 NQSQGPPPRPGKPEGPPSQGGNK---PQGPPPHPGKPQGPPPQEGNKPQRPPPPGRP 266


>gi|7706501 WW domain binding protein 11 [Homo sapiens]
          Length = 641

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 53  PATRIPDPPKHEHYPTPSGWQPPRDPPPNLP 83
           P  R P PP       P G  PPR PPP LP
Sbjct: 463 PPGRPPGPPPGPPPGLPPG-PPPRGPPPRLP 492


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)

Query: 27  SQTQGPPDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYPTPSGWQPPRDPPPNLPYFV 86
           S+++ PP  P    S    +   RL P+     PP+  H P+P    PP+      P   
Sbjct: 365 SRSRSPPKKPPKRTSSPPRK-TRRLSPSA---SPPRRRHRPSPPATPPPKTRHSPTPQQS 420

Query: 87  RRSRMHNIPVYKDITHG 103
            R+R   + V    T G
Sbjct: 421 NRTRKSRVSVSPGRTSG 437


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.140    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,244,963
Number of Sequences: 37866
Number of extensions: 466697
Number of successful extensions: 2431
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 2185
Number of HSP's gapped (non-prelim): 294
length of query: 166
length of database: 18,247,518
effective HSP length: 95
effective length of query: 71
effective length of database: 14,650,248
effective search space: 1040167608
effective search space used: 1040167608
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.