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Search of human proteins with 47717098
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47717098 vacuolar H+ ATPase C2 isoform b [Homo sapiens]
(381 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47717098 vacuolar H+ ATPase C2 isoform b [Homo sapiens] 746 0.0
gi|87159812 vacuolar H+ ATPase C2 isoform a [Homo sapiens] 724 0.0
gi|4502315 ATPase, H+ transporting, lysosomal V1 subunit C1 [Hom... 490 e-138
gi|215982794 myosin VA isoform 2 [Homo sapiens] 40 0.005
gi|215982791 myosin VA isoform 1 [Homo sapiens] 40 0.005
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 34 0.25
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 34 0.25
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 33 0.43
gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens] 33 0.43
gi|166795254 ankyrin repeat domain 13C [Homo sapiens] 32 0.73
gi|20336214 glutaminase 2 [Homo sapiens] 32 1.2
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 32 1.2
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 32 1.2
gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo... 32 1.2
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 31 1.6
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 31 1.6
gi|57232746 nuclear receptor interacting protein 1 [Homo sapiens] 30 2.8
gi|120953300 leucine-rich repeats and IQ motif containing 1 isof... 30 2.8
gi|120953243 leucine-rich repeats and IQ motif containing 1 isof... 30 2.8
gi|110349721 titin isoform novex-3 [Homo sapiens] 30 3.6
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 30 3.6
gi|150170658 hypothetical protein LOC137392 [Homo sapiens] 30 3.6
gi|114688046 TBC1 domain family, member 4 [Homo sapiens] 30 3.6
gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo sa... 30 3.6
gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo sap... 30 3.6
gi|187960109 RNA binding motif protein 28 [Homo sapiens] 30 3.6
gi|91206462 secreted phosphoprotein 1 isoform a [Homo sapiens] 30 4.7
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 30 4.7
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 30 4.7
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 30 4.7
>gi|47717098 vacuolar H+ ATPase C2 isoform b [Homo sapiens]
Length = 381
Score = 746 bits (1926), Expect = 0.0
Identities = 381/381 (100%), Positives = 381/381 (100%)
Query: 1 MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKL 60
MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKL
Sbjct: 1 MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKL 60
Query: 61 DTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSV 120
DTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSV
Sbjct: 61 DTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSV 120
Query: 121 VDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY 180
VDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY
Sbjct: 121 VDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY 180
Query: 181 LVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKA 240
LVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKA
Sbjct: 181 LVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKA 240
Query: 241 KENKFTVREFYYDEKEIEREREEMARLLSDKKQQYGPLLRWLKVNFSEAFIAWIHIKALR 300
KENKFTVREFYYDEKEIEREREEMARLLSDKKQQYGPLLRWLKVNFSEAFIAWIHIKALR
Sbjct: 241 KENKFTVREFYYDEKEIEREREEMARLLSDKKQQYGPLLRWLKVNFSEAFIAWIHIKALR 300
Query: 301 VFVESVLRYGLPVNFQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGL 360
VFVESVLRYGLPVNFQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGL
Sbjct: 301 VFVESVLRYGLPVNFQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGL 360
Query: 361 QLNNQDYFPYVYFHIDLSLLD 381
QLNNQDYFPYVYFHIDLSLLD
Sbjct: 361 QLNNQDYFPYVYFHIDLSLLD 381
>gi|87159812 vacuolar H+ ATPase C2 isoform a [Homo sapiens]
Length = 427
Score = 724 bits (1869), Expect = 0.0
Identities = 381/427 (89%), Positives = 381/427 (89%), Gaps = 46/427 (10%)
Query: 1 MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKL 60
MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKL
Sbjct: 1 MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKL 60
Query: 61 DTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSV 120
DTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSV
Sbjct: 61 DTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSV 120
Query: 121 VDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY 180
VDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY
Sbjct: 121 VDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY 180
Query: 181 LVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKA 240
LVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKA
Sbjct: 181 LVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKA 240
Query: 241 KENKFTVREFYYDEKEIEREREEMARLLSDKKQQY------------------------- 275
KENKFTVREFYYDEKEIEREREEMARLLSDKKQQY
Sbjct: 241 KENKFTVREFYYDEKEIEREREEMARLLSDKKQQYQTSCVALKKGSSTFPDHKVKVTPLG 300
Query: 276 ---------------------GPLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVN 314
GPLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVN
Sbjct: 301 NPDRPAAGQTDRERESEGEGEGPLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVN 360
Query: 315 FQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGLQLNNQDYFPYVYFH 374
FQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGLQLNNQDYFPYVYFH
Sbjct: 361 FQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGLQLNNQDYFPYVYFH 420
Query: 375 IDLSLLD 381
IDLSLLD
Sbjct: 421 IDLSLLD 427
>gi|4502315 ATPase, H+ transporting, lysosomal V1 subunit C1 [Homo
sapiens]
Length = 382
Score = 490 bits (1261), Expect = e-138
Identities = 238/382 (62%), Positives = 320/382 (83%), Gaps = 3/382 (0%)
Query: 1 MSEFWLISAPGDKENLQALERMNTVTSKSN-LSYNTKFAIPDFKVGTLDSLVGLSDELGK 59
M+EFWLISAPG+K Q E+++ TSK+N L+ +KF IPD KVGTLD LVGLSDEL K
Sbjct: 1 MTEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAK 60
Query: 60 LDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVS 119
LD F E +++++AQ + +V+EDSK KVQE+LLANGVDL +++T F+WDMAKYP+KQ L +
Sbjct: 61 LDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKN 120
Query: 120 VVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSE 179
+ + IAK + QI+ DLKSR +AYN LK NL+NLE+K+ G+L TR+L++IV K+DFVLDSE
Sbjct: 121 ISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSE 180
Query: 180 YLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTK 239
YLVTLLV+VPK N++ W K YE+L++MVVPRS+ +++ED++ L VTLFRK ++DF+ K
Sbjct: 181 YLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHK 240
Query: 240 AKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYGPLLRWLKVNFSEAFIAWIHIKAL 299
A+ENKF VR+F Y+E+E++ ++EEM RL +DKK+Q+GPL+RWLKVNFSEAFIAWIH+KAL
Sbjct: 241 ARENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHVKAL 300
Query: 300 RVFVESVLRYGLPVNFQAVLLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPG 359
RVFVESVLRYGLPVNFQA+LLQP+KK + K+LREVL+ +++HLD AA +I+DA ++IPG
Sbjct: 301 RVFVESVLRYGLPVNFQAMLLQPNKK-TLKKLREVLHELYKHLDSSAA-AIIDAPMDIPG 358
Query: 360 LQLNNQDYFPYVYFHIDLSLLD 381
L L+ Q+Y+PYVY+ ID +LL+
Sbjct: 359 LNLSQQEYYPYVYYKIDCNLLE 380
>gi|215982794 myosin VA isoform 2 [Homo sapiens]
Length = 1828
Score = 39.7 bits (91), Expect = 0.005
Identities = 61/287 (21%), Positives = 125/287 (43%), Gaps = 50/287 (17%)
Query: 15 NLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIRRMAQS 74
NL+ + T +S+L + + + KV T ++ L +E+ KL E R +
Sbjct: 952 NLEGIYNSETEKLRSDLE-RLQLSEEEAKVAT-GRVLSLQEEIAKLRKDLEQT--RSEKK 1007
Query: 75 VVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSVVDTIAKQLA----Q 130
+E D + E L++N + + + E + + + Q + +T+ K+L Q
Sbjct: 1008 CIEEHADRYKQETEQLVSNLKEENTLLKQ-EKEALNHRIVQQAKEMTETMEKKLVEETKQ 1066
Query: 131 IEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEYLVTLLVIVPK 190
+E+DL Y L LE++ D + +E +TL+V VPK
Sbjct: 1067 LELDLNDERLRYQNLLNEFSRLEERY----------DDLKEE---------MTLMVHVPK 1107
Query: 191 PNYSQWQKTYES----------LSDMV-VPRSTKLITEDKEGGLFTVTLFRKVIEDFKTK 239
P + + T+ S +++M +P T+ +E K ++LF K ++ T+
Sbjct: 1108 PGHKRTDSTHSSNESEYIFSSEIAEMEDIPSRTEEPSEKKVP--LDMSLFLK-LQKRVTE 1164
Query: 240 AKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYGPLLRWLKVNF 286
++ K +++ E++R+ E++ R S K++ P +R ++ +
Sbjct: 1165 LEQEKQVMQD------ELDRKEEQVLR--SKAKEEERPQIRGAELEY 1203
>gi|215982791 myosin VA isoform 1 [Homo sapiens]
Length = 1855
Score = 39.7 bits (91), Expect = 0.005
Identities = 61/287 (21%), Positives = 125/287 (43%), Gaps = 50/287 (17%)
Query: 15 NLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIRRMAQS 74
NL+ + T +S+L + + + KV T ++ L +E+ KL E R +
Sbjct: 952 NLEGIYNSETEKLRSDLE-RLQLSEEEAKVAT-GRVLSLQEEIAKLRKDLEQT--RSEKK 1007
Query: 75 VVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSVVDTIAKQLA----Q 130
+E D + E L++N + + + E + + + Q + +T+ K+L Q
Sbjct: 1008 CIEEHADRYKQETEQLVSNLKEENTLLKQ-EKEALNHRIVQQAKEMTETMEKKLVEETKQ 1066
Query: 131 IEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEYLVTLLVIVPK 190
+E+DL Y L LE++ D + +E +TL+V VPK
Sbjct: 1067 LELDLNDERLRYQNLLNEFSRLEERY----------DDLKEE---------MTLMVHVPK 1107
Query: 191 PNYSQWQKTYES----------LSDMV-VPRSTKLITEDKEGGLFTVTLFRKVIEDFKTK 239
P + + T+ S +++M +P T+ +E K ++LF K ++ T+
Sbjct: 1108 PGHKRTDSTHSSNESEYIFSSEIAEMEDIPSRTEEPSEKKVP--LDMSLFLK-LQKRVTE 1164
Query: 240 AKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYGPLLRWLKVNF 286
++ K +++ E++R+ E++ R S K++ P +R ++ +
Sbjct: 1165 LEQEKQVMQD------ELDRKEEQVLR--SKAKEEERPQIRGAELEY 1203
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 33.9 bits (76), Expect = 0.25
Identities = 64/298 (21%), Positives = 126/298 (42%), Gaps = 43/298 (14%)
Query: 13 KENLQALE----RMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAESLI 68
KE L +E R+ + + + TK + D GT SD+L +L+ E+L
Sbjct: 333 KERLHDIEFYKARVEELKEDNQVLLETKTMLEDQLEGTR----ARSDKLHELEK--ENLQ 386
Query: 69 RRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVT-------HFEWDM---------AKYP 112
+ +E+ D K E L+ + L H W++ ++ P
Sbjct: 387 LKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQSMDESLHLGWELEQISRTSELSEAP 446
Query: 113 VKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKE 172
K V + + +L ++EM+ +S T L+T ++++E + L + +SK+
Sbjct: 447 QKSLGHEVNELTSSRLLKLEMENQSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKK 506
Query: 173 DFVLDSEYLVTLLVIVPKPNYS--------QWQKTYESLSDMVVPRSTKLITEDKEGGLF 224
+L++E + + N S Q +KT E+L + R K++ ++ E
Sbjct: 507 VEILENEIVQEKQSLQNCQNLSKDLMKEKAQLEKTIETLREN-SERQIKILEQENEHLNQ 565
Query: 225 TVTLFR---KVIEDFKTK--AKENKF---TVREFYYDEKEIEREREEMARLLSDKKQQ 274
TV+ R ++ + + K KENK +++E +IE E+ ++ + L K++
Sbjct: 566 TVSSLRQRSQISAEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEK 623
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 33.9 bits (76), Expect = 0.25
Identities = 64/298 (21%), Positives = 126/298 (42%), Gaps = 43/298 (14%)
Query: 13 KENLQALE----RMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAESLI 68
KE L +E R+ + + + TK + D GT SD+L +L+ E+L
Sbjct: 333 KERLHDIEFYKARVEELKEDNQVLLETKTMLEDQLEGTR----ARSDKLHELEK--ENLQ 386
Query: 69 RRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVT-------HFEWDM---------AKYP 112
+ +E+ D K E L+ + L H W++ ++ P
Sbjct: 387 LKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQSMDESLHLGWELEQISRTSELSEAP 446
Query: 113 VKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKE 172
K V + + +L ++EM+ +S T L+T ++++E + L + +SK+
Sbjct: 447 QKSLGHEVNELTSSRLLKLEMENQSLTKTVEELRTTVDSVEGNASKILKMEKENQRLSKK 506
Query: 173 DFVLDSEYLVTLLVIVPKPNYS--------QWQKTYESLSDMVVPRSTKLITEDKEGGLF 224
+L++E + + N S Q +KT E+L + R K++ ++ E
Sbjct: 507 VEILENEIVQEKQSLQNCQNLSKDLMKEKAQLEKTIETLREN-SERQIKILEQENEHLNQ 565
Query: 225 TVTLFR---KVIEDFKTK--AKENKF---TVREFYYDEKEIEREREEMARLLSDKKQQ 274
TV+ R ++ + + K KENK +++E +IE E+ ++ + L K++
Sbjct: 566 TVSSLRQRSQISAEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEK 623
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 33.1 bits (74), Expect = 0.43
Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 44/259 (16%)
Query: 41 DFKVGTLDSLVGLSDELGKLDTFAESLIRRMAQSVV--EVMEDSKGKVQEHLLANGVDLT 98
D +GT++SL + KL AE+L +R+ + + + +E +K ++Q+ L DLT
Sbjct: 1381 DDDLGTIESL---EEAKKKLLKDAEALSQRLEEKALAYDKLEKTKNRLQQEL----DDLT 1433
Query: 99 SFVTHFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDLKSRTAAY--NTLKTNLENLEKKS 156
+ H ++ + S ++ K+ Q+ + KS +A Y + E EK++
Sbjct: 1434 VDLDH----------QRQVASNLEKKQKKFDQLLAEEKSISARYAEERDRAEAEAREKET 1483
Query: 157 MGNLFTRTLSDIV-SKEDFV-------LDSEYLVTLLVIVPKPNYSQWQKTYESLSDMVV 208
R L + + +KE+F D E L++ V K N + +K+ +L V
Sbjct: 1484 KALSLARALEEALEAKEEFERQNKQLRADMEDLMSSKDDVGK-NVHELEKSKRALEQQVE 1542
Query: 209 PRSTKL--------ITEDKEGGL-FTVTLFRKVIE-DFKTKAKEN----KFTVREFYYDE 254
T+L TED + L + + E D +T+ ++N + +++ E
Sbjct: 1543 EMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLLIKQVRELE 1602
Query: 255 KEIEREREEMARLLSDKKQ 273
E+E ER++ A ++ KK+
Sbjct: 1603 AELEDERKQRALAVASKKK 1621
>gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens]
Length = 1257
Score = 33.1 bits (74), Expect = 0.43
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 25/136 (18%)
Query: 231 KVIEDF-KTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYGPLLRWLKVNFSEA 289
K+++ F +T + ++ YD KE+ER RE + D +L W ++
Sbjct: 1064 KMVDSFHRTSLQYGIMCLKRLNYDRKELERRREASQHEIKD-------VLVW----SNDR 1112
Query: 290 FIAWIHIKALRVFVESVLRYG-------LPVNFQ----AVLLQPHKKSSTKRLREVLNSV 338
I WI LR + ++L G L NF A+LLQ +++ + R++L
Sbjct: 1113 VIRWIQAIGLREYANNILESGVHGSLIALDENFDYSSLALLLQIPTQNT--QARQILERE 1170
Query: 339 FRHLDEVAATSILDAS 354
+ +L + LD S
Sbjct: 1171 YNNLLALGTERRLDES 1186
>gi|166795254 ankyrin repeat domain 13C [Homo sapiens]
Length = 541
Score = 32.3 bits (72), Expect = 0.73
Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 19/191 (9%)
Query: 132 EMDLKSRTAAYN-TLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEYLVTLLVIVPK 190
E+D+ + Y+ TL T + + G LF ++ V +F+ D YLV LV+
Sbjct: 316 EVDILMSSDIYSATLSTKSISFTRAQTGWLFREDKTERVG--NFLADF-YLVNGLVL--- 369
Query: 191 PNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKAKENKFTVREF 250
+ +K E LS+ + R+ ++ +GG F + T +N T E+
Sbjct: 370 ----ESRKRREHLSEEDILRNKAIMESLSKGGNIMEQNFEPIRRQSLTPPPQNTITWEEY 425
Query: 251 YYDE--------KEIEREREEMARLLSDKKQQYGPLLRWLKVNFSEAFIAWIHIKALRVF 302
E +E+ + + + Q PL L +N E + H LR F
Sbjct: 426 ISAENGKAPHLGRELVCKESKKTFKATIAMSQEFPLGIELLLNVLEVVAPFKHFNKLREF 485
Query: 303 VESVLRYGLPV 313
V+ L G PV
Sbjct: 486 VQMKLPPGFPV 496
>gi|20336214 glutaminase 2 [Homo sapiens]
Length = 602
Score = 31.6 bits (70), Expect = 1.2
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 213 KLITEDKEGGLFTVTLFRKVIED---FKTKAKENKFTVREFYYDEKEIEREREEMARLLS 269
+++ E GGL LFRK + T+A KF + +F ++R E++ L
Sbjct: 117 RVVQESSSGGLLDRDLFRKCVSSNIVLLTQAFRKKFVIPDFEEFTGHVDRIFEDVKELTG 176
Query: 270 DKKQQYGPLL 279
K Y P L
Sbjct: 177 GKVAAYIPQL 186
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 31.6 bits (70), Expect = 1.2
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 40/208 (19%)
Query: 13 KENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELG-KLDTFA---ESLI 68
KE+L+ R+N K NL + K I GL +E+ K++T ++LI
Sbjct: 641 KEDLEIEHRINIEKLKDNLGIHYKQQID-----------GLQNEMSQKIETMQFEKDNLI 689
Query: 69 RRMAQSVVEVMEDSKGKVQEHLLANGV--DLTSFVTHF--EWDMAKYPVK---------Q 115
+ Q ++E+ SK K + L N ++T + E ++ + K Q
Sbjct: 690 TKQNQLILEI---SKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEVQ 746
Query: 116 PLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFV 175
L + + KQ+ + E DL+ + A + L++ EKK TL D++ V
Sbjct: 747 ELQLKTELLEKQMKEKENDLQEKFAQLEAENSILKD-EKK--------TLEDMLKIHTPV 797
Query: 176 LDSEYLVTLLVIVPKPNYSQWQKTYESL 203
E L+ L I K S W+K E L
Sbjct: 798 SQEERLIFLDSIKSKSKDSVWEKEIEIL 825
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 31.6 bits (70), Expect = 1.2
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 40/208 (19%)
Query: 13 KENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELG-KLDTFA---ESLI 68
KE+L+ R+N K NL + K I GL +E+ K++T ++LI
Sbjct: 641 KEDLEIEHRINIEKLKDNLGIHYKQQID-----------GLQNEMSQKIETMQFEKDNLI 689
Query: 69 RRMAQSVVEVMEDSKGKVQEHLLANGV--DLTSFVTHF--EWDMAKYPVK---------Q 115
+ Q ++E+ SK K + L N ++T + E ++ + K Q
Sbjct: 690 TKQNQLILEI---SKLKDLQQSLVNSKSEEMTLQINELQKEIEILRQEEKEKGTLEQEVQ 746
Query: 116 PLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFV 175
L + + KQ+ + E DL+ + A + L++ EKK TL D++ V
Sbjct: 747 ELQLKTELLEKQMKEKENDLQEKFAQLEAENSILKD-EKK--------TLEDMLKIHTPV 797
Query: 176 LDSEYLVTLLVIVPKPNYSQWQKTYESL 203
E L+ L I K S W+K E L
Sbjct: 798 SQEERLIFLDSIKSKSKDSVWEKEIEIL 825
>gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo
sapiens]
Length = 423
Score = 31.6 bits (70), Expect = 1.2
Identities = 13/34 (38%), Positives = 25/34 (73%)
Query: 65 ESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLT 98
ES+I + + S VE+M +KG+ ++ +ANGV+++
Sbjct: 280 ESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEIS 313
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 31.2 bits (69), Expect = 1.6
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 252 YDEKEIEREREEMARLLSDKKQQYGPLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGL 311
+DE+ R L +DK + PLL + N + + + + F+ +++RYG+
Sbjct: 1377 FDERSEAPRRPSRKGLRNDKDKPLPPLLARVGGNIE---VLGFNARQRKAFLNAIMRYGM 1433
Query: 312 PVNFQAV---LLQPHKKSSTKRLREVLNSVFRHLDEVAATSILDASVEIPGLQLNNQ 365
P L++ + S K + ++ RHL E A + +P L+ Q
Sbjct: 1434 PPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQ 1490
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 31.2 bits (69), Expect = 1.6
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 46 TLDSLVGLSDELGKLDTFAESLIRRMA--QSVVEVMEDSKGKVQEHLLANGVDLTSF--- 100
TLDS+ L+ E+ +L+T E L + Q ++E SK ++ + L ++ F
Sbjct: 887 TLDSVTELASEVSQLNTIKEHLEEEIKHHQKIIEDQNQSKMQLLQSLQEQKKEMDEFRYQ 946
Query: 101 -----VTHFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDLKS-RTAAYNTLKTNLENLEK 154
TH + + K + L ++ I QL + D+++ + + K N+E
Sbjct: 947 HEQMNATHTQLFLEKDEEIKSLQKTIEQIKTQLHEERQDIQTDNSDIFQETKVQSLNIEN 1006
Query: 155 KS 156
S
Sbjct: 1007 GS 1008
>gi|57232746 nuclear receptor interacting protein 1 [Homo sapiens]
Length = 1158
Score = 30.4 bits (67), Expect = 2.8
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 53 LSDELGKLDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYP 112
LSD + L+ E+L+ M SV KGK LLA+ L SF + +
Sbjct: 101 LSDSIMNLNVKKEALLAGMVDSV------PKGKQDSTLLAS--LLQSFSSRLQTVALSQQ 152
Query: 113 VKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKK 155
++Q L ++ ++E DL+ A + LKT L+ + K
Sbjct: 153 IRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKVK 195
>gi|120953300 leucine-rich repeats and IQ motif containing 1 isoform
1 [Homo sapiens]
Length = 1722
Score = 30.4 bits (67), Expect = 2.8
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 6/167 (3%)
Query: 114 KQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDI-VSKE 172
KQ L + D KQ + E + K LEN++K+ + + + KE
Sbjct: 186 KQTLKAQRDREEKQFQEEEEKRHCWMKQFKVEKKKLENIQKQEQDKMNDELYKEEKIWKE 245
Query: 173 DFVLDSEYLVTLLVIVPKPNY---SQWQKTYESLSDMVVPRSTKLITEDKEGGLFTV--T 227
F EY+ L + + + Q +K SL + K+ + K +
Sbjct: 246 KFKQHEEYIRNLHLQMEEERTRFKDQQEKEKNSLLKQQNNAAVKIQAKYKAFVAYQKYGP 305
Query: 228 LFRKVIEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQ 274
+ ++ IE K KA+E K + E+E + EE R+ ++K+Q
Sbjct: 306 IIKEQIESKKRKAQEWKEKEAKIRQKEEENRKRLEEEQRIKEERKKQ 352
>gi|120953243 leucine-rich repeats and IQ motif containing 1 isoform
2 [Homo sapiens]
Length = 1336
Score = 30.4 bits (67), Expect = 2.8
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 6/167 (3%)
Query: 114 KQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDI-VSKE 172
KQ L + D KQ + E + K LEN++K+ + + + KE
Sbjct: 186 KQTLKAQRDREEKQFQEEEEKRHCWMKQFKVEKKKLENIQKQEQDKMNDELYKEEKIWKE 245
Query: 173 DFVLDSEYLVTLLVIVPKPNY---SQWQKTYESLSDMVVPRSTKLITEDKEGGLFTV--T 227
F EY+ L + + + Q +K SL + K+ + K +
Sbjct: 246 KFKQHEEYIRNLHLQMEEERTRFKDQQEKEKNSLLKQQNNAAVKIQAKYKAFVAYQKYGP 305
Query: 228 LFRKVIEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQ 274
+ ++ IE K KA+E K + E+E + EE R+ ++K+Q
Sbjct: 306 IIKEQIESKKRKAQEWKEKEAKIRQKEEENRKRLEEEQRIKEERKKQ 352
>gi|110349721 titin isoform novex-3 [Homo sapiens]
Length = 5604
Score = 30.0 bits (66), Expect = 3.6
Identities = 46/207 (22%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 130 QIEMDLKSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEYLVTLLVIVP 189
+I++DL+ + +N K ++E +K M + +T+S K D++ D EYL +
Sbjct: 3630 RIKVDLRFTGSPFNK-KQDVE--QKGMMRTIHFKTMSS-AKKTDYMYDEEYLES------ 3679
Query: 190 KPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKAKENKFTVRE 249
K + W ES D + + E ++ + +K + T ++ + T+R
Sbjct: 3680 KSDIRGWLNVGESFLDKETKVKLQRLREARK-----TLMEKKKLSLLDTSSEISSRTLRS 3734
Query: 250 FYYDEKEIEREREEM-ARLLSDKKQQYGPLLRWLKVNFSEAFIAWIHIKALRVFVESVLR 308
D K+I RE+M R +SD + Y KV+ S I +++
Sbjct: 3735 EASD-KDILFSREDMKIRSMSDLAESY-------KVDHSAESIVQNPHALSNQMDQNIES 3786
Query: 309 YGLPVNFQAVLLQPHKKSSTKRLREVL 335
LP +FQ ++ + ++ + +E L
Sbjct: 3787 EELPTSFQTIVDEEIFQTEIRMSQEAL 3813
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 30.0 bits (66), Expect = 3.6
Identities = 42/208 (20%), Positives = 90/208 (43%), Gaps = 20/208 (9%)
Query: 76 VEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDL 135
++ +E ++ K+QE+ N L + + + +++ +KQ + A+Q + D
Sbjct: 980 IQQVETTQRKIQENQPENSKTLATQLNQQKMLVSEIEMKQSKMDECQKYAEQYSATVKDY 1039
Query: 136 KSRTAAYNTLKTNLENLEKKSMGNLFTRTLSDIVSKEDFVLDSEY--LVTLLVIVPKPNY 193
+ +T Y + +++ +K + ++ +D++ +E L + Y LVTL+
Sbjct: 1040 ELQTMTYRAM---VDSQQKSPVKRRRMQSSADLIIQEFMDLRTRYTALVTLM-------- 1088
Query: 194 SQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRK---VIEDFKT--KAKENKFTVR 248
+Q+ K + K E E G ++ L R+ V+E+ K K E + V
Sbjct: 1089 TQYIKFAGDSLKRLEEEEIKRCKETSEHGAYSDLLQRQKATVLENSKLTGKISELERMVA 1148
Query: 249 EFYYDEKEIEREREEMARLLSD--KKQQ 274
E + +E E ++ + +KQQ
Sbjct: 1149 ELKKQKSRVEEELPKVREAAENELRKQQ 1176
>gi|150170658 hypothetical protein LOC137392 [Homo sapiens]
Length = 289
Score = 30.0 bits (66), Expect = 3.6
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 40 PDFKVGTLDSLVGLSDELGKLDTFAESLIRRMAQSVVE-------VMEDSKGKVQEHLLA 92
P K+G L+ +DE KL + ++ + R+ VVE +++ + ++ L A
Sbjct: 64 PHLKLG----LMNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTA 119
Query: 93 NGVDLTSFVTHFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDLKSRTAAYNTLKTNLENL 152
+ +T E + P + ++S +T +L + MD SRT+ + L+ + N
Sbjct: 120 RNREAKQ-LTQLERTRQRNPSDRHVISQAET---ELQRAAMD-ASRTSRH--LEETINNF 172
Query: 153 EKKSMGNLFT 162
E++ M ++ T
Sbjct: 173 ERQKMKDIKT 182
>gi|114688046 TBC1 domain family, member 4 [Homo sapiens]
Length = 1298
Score = 30.0 bits (66), Expect = 3.6
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 12 DKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFAESLIRRM 71
D E L+ LER N+ + N+ K + K+ L+S + + L +T +SLIR +
Sbjct: 1195 DSETLEKLERANSQLKRQNMDLLEKLQVAHTKIQALESNL---ENLLTRETKMKSLIRTL 1251
Query: 72 AQ 73
Q
Sbjct: 1252 EQ 1253
>gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo
sapiens]
Length = 1185
Score = 30.0 bits (66), Expect = 3.6
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 20/105 (19%)
Query: 247 VREFYYDEKEIEREREEMARLLSDKKQQYGPLLRWLKVNFSEAFIAWIHIKALRVFVESV 306
+R YD KE+ER+REE + D +L W ++ I WI L+ + ++
Sbjct: 1024 LRRLNYDRKELERKREESQSEIKD-------VLVW----SNDRVIRWILSIGLKEYANNL 1072
Query: 307 LRYGL---------PVNFQAVLLQPHKKSSTKRLREVLNSVFRHL 342
+ G+ +F A+ L + + R VL F +L
Sbjct: 1073 IESGVHGALLALDETFDFSALALLLQIPTQNTQARAVLEREFNNL 1117
>gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo sapiens]
Length = 1202
Score = 30.0 bits (66), Expect = 3.6
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 20/105 (19%)
Query: 247 VREFYYDEKEIEREREEMARLLSDKKQQYGPLLRWLKVNFSEAFIAWIHIKALRVFVESV 306
+R YD KE+ER+REE + D +L W ++ I WI L+ + ++
Sbjct: 1024 LRRLNYDRKELERKREESQSEIKD-------VLVW----SNDRVIRWILSIGLKEYANNL 1072
Query: 307 LRYGL---------PVNFQAVLLQPHKKSSTKRLREVLNSVFRHL 342
+ G+ +F A+ L + + R VL F +L
Sbjct: 1073 IESGVHGALLALDETFDFSALALLLQIPTQNTQARAVLEREFNNL 1117
>gi|187960109 RNA binding motif protein 28 [Homo sapiens]
Length = 759
Score = 30.0 bits (66), Expect = 3.6
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 189 PKPNYSQWQKTYESLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTK 239
PKP +QW++ + LS V R K G T T F +++E +K K
Sbjct: 697 PKPQINQWKQEKQQLSSEQVSRK-------KAKGNKTETRFNQLVEQYKQK 740
>gi|91206462 secreted phosphoprotein 1 isoform a [Homo sapiens]
Length = 314
Score = 29.6 bits (65), Expect = 4.7
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 6/138 (4%)
Query: 5 WLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKVGTLDSLVGLSDELGKLDTFA 64
WL P K+NL A + N V+S+ + + +P + D + + DE +
Sbjct: 43 WLNPDPSQKQNLLAPQ--NAVSSEETNDFKQE-TLPSKSNESHDHMDDMDDEDDDDHVDS 99
Query: 65 ESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVTHFEWDMAKYPVKQPLVSVVDTI 124
+ I V+ +DS + H + + VT F D+ V P+V VDT
Sbjct: 100 QDSIDSNDSDDVDDTDDSHQSDESH---HSDESDELVTDFPTDLPATEVFTPVVPTVDTY 156
Query: 125 AKQLAQIEMDLKSRTAAY 142
+ + L+S++ +
Sbjct: 157 DGRGDSVVYGLRSKSKKF 174
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 29.6 bits (65), Expect = 4.7
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 202 SLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKAKENKFTVREFYYDEKEIERER 261
+++D +VPRS+ + +V L K+ E K K K + V + + +++RE+
Sbjct: 781 AMTDAMVPRSSYEKLQSSLESEVSV-LASKLKESVKEKEKVHSEVV-QIRSEVSQVKREK 838
Query: 262 EEMARLLSDKKQQYGPLLR 280
E + LL K+Q+ LL+
Sbjct: 839 ENIQTLLKSKEQEVNELLQ 857
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 29.6 bits (65), Expect = 4.7
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 202 SLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKAKENKFTVREFYYDEKEIERER 261
+++D +VPRS+ + +V L K+ E K K K + V + + +++RE+
Sbjct: 770 AMTDAMVPRSSYEKLQSSLESEVSV-LASKLKESVKEKEKVHSEVV-QIRSEVSQVKREK 827
Query: 262 EEMARLLSDKKQQYGPLLR 280
E + LL K+Q+ LL+
Sbjct: 828 ENIQTLLKSKEQEVNELLQ 846
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 29.6 bits (65), Expect = 4.7
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 202 SLSDMVVPRSTKLITEDKEGGLFTVTLFRKVIEDFKTKAKENKFTVREFYYDEKEIERER 261
+++D +VPRS+ + +V L K+ E K K K + V + + +++RE+
Sbjct: 749 AMTDAMVPRSSYEKLQSSLESEVSV-LASKLKESVKEKEKVHSEVV-QIRSEVSQVKREK 806
Query: 262 EEMARLLSDKKQQYGPLLR 280
E + LL K+Q+ LL+
Sbjct: 807 ENIQTLLKSKEQEVNELLQ 825
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,197,522
Number of Sequences: 37866
Number of extensions: 468790
Number of successful extensions: 1992
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 1960
Number of HSP's gapped (non-prelim): 67
length of query: 381
length of database: 18,247,518
effective HSP length: 104
effective length of query: 277
effective length of database: 14,309,454
effective search space: 3963718758
effective search space used: 3963718758
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.