Guide to the Human Genome
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Name: AP1M2 Sequence: fasta or formatted (423aa) NCBI GI: 9506797
Description:

adaptor-related protein complex 1, mu 2 subunit

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         16           1
 C cysteine            0.5          2           1
 D aspartate           3.8         16           1
 E glutamate           8.3         35           3
 F phenylalanine       5.4         23           1
 G glycine             5.7         24           2
 H histidine           1.7          7           1
 I isoleucine          6.9         29           2
 K lysine              7.8         33           2
 L leucine             9.0         38           2
 M methionine          2.1          9           1
 N asparagine          3.8         16           1
 P proline             4.7         20           2
 Q glutamine           3.3         14           2
 R arginine            4.7         20           1
 S serine              9.7         41           1
 T threonine           4.0         17           2
 V valine              9.9         42           2
 W tryptophan          1.2          5           1
 Y tyrosine            3.8         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adaptor-related protein complex 1, mu 2 subunit [Homo... 
AP1M1                 0.835   adaptor-related protein complex 1, mu 1 subunit isof...
AP1M1                 0.824   adaptor-related protein complex 1, mu 1 subunit iso...
AP2M1                 0.382   adaptor-related protein complex 2, mu 1 subunit isof...
AP2M1                 0.379   adaptor-related protein complex 2, mu 1 subunit isof...
AP3M1                 0.221   adaptor-related protein complex 3, mu 1 subunit [Homo...
AP3M1                 0.221   adaptor-related protein complex 3, mu 1 subunit [Hom...
AP3M2                 0.205   adaptor-related protein complex 3, mu 2 subunit [Ho...
AP3M2                 0.205   adaptor-related protein complex 3, mu 2 subunit [Homo...
AP4M1                 0.194   adaptor-related protein complex 4, mu 1 subunit [Hom...
STON2                 0.060   stonin 2 
STON1                 0.047   stonin 1 
STON1-GTF2A1L         0.047   STON1-GTF2A1L protein 
MUDENG                0.025   Mu-2 related death-inducing protein 
ARCN1                 0.017   archain isoform 1 
AP4S1                 0.017   adaptor-related protein complex 4, sigma 1 subunit ...
AP2S1                 0.016   adaptor-related protein complex 2, sigma 1 subunit i...
AP1S3                 0.015   adaptor-related protein complex 1, sigma 3 subunit [...
AP1S1                 0.012   adaptor-related protein complex 1, sigma 1 subunit [H...
AP1S2                 0.011   adaptor-related protein complex 1 sigma 2 subunit [H...
APOA5                 0.010   apolipoprotein AV 
AP2S1                 0.009   adaptor-related protein complex 2, sigma 1 subunit i...
ATP6V1C2              0.009   vacuolar H+ ATPase C2 isoform a 
ATP6V1C2              0.009   vacuolar H+ ATPase C2 isoform b 
COPZ2                 0.007   coatomer protein complex, subunit zeta 2 
GON4L                 0.007   gon-4-like isoform a 
GRAMD1B               0.007   GRAM domain containing 1B 
HMBOX1                0.006   homeobox containing 1 
HMBOX1                0.006   homeobox containing 1 
AP4S1                 0.006   adaptor-related protein complex 4, sigma 1 subunit i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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