Guide to the Human Genome
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Name: SPP1 Sequence: fasta or formatted (300aa) NCBI GI: 4759166
Description:

secreted phosphoprotein 1 isoform b

Referenced in:

Bone and Related Tissues

Other entries for this name:
alt prot [314aa] secreted phosphoprotein 1 isoform a
alt prot [287aa] secreted phosphoprotein 1 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         15           1
 C cysteine            1.0          3           1
 D aspartate          15.7         47           4
 E glutamate           8.0         24           2
 F phenylalanine       2.3          7           1
 G glycine             2.3          7           1
 H histidine           5.3         16           2
 I isoleucine          3.3         10           1
 K lysine              6.0         18           2
 L leucine             6.0         18           2
 M methionine          1.7          5           1
 N asparagine          3.3         10           1
 P proline             5.0         15           1
 Q glutamine           4.3         13           1
 R arginine            3.3         10           2
 S serine             13.3         40           2
 T threonine           4.7         14           1
 V valine              6.0         18           2
 W tryptophan          0.7          2           1
 Y tyrosine            2.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   secreted phosphoprotein 1 isoform b 
SPP1                  0.983   secreted phosphoprotein 1 isoform a 
SPP1                  0.893   secreted phosphoprotein 1 isoform c 
DSPP                  0.066   dentin sialophosphoprotein preproprotein 
MTERFD2               0.041   MTERF domain containing 2 
UBTF                  0.039   upstream binding transcription factor, RNA polymera...
UBTF                  0.039   upstream binding transcription factor, RNA polymera...
UBTF                  0.039   upstream binding transcription factor, RNA polymerase...
DMP1                  0.036   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
NCL                   0.034   nucleolin 
DMP1                  0.034   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
ATAD2                 0.034   ATPase family, AAA domain containing 2 
IWS1                  0.034   IWS1 homolog 
HUWE1                 0.034   HECT, UBA and WWE domain containing 1 
LEO1                  0.034   Leo1, Paf1/RNA polymerase II complex component, homo...
ACRC                  0.032   ACRC protein 
BAZ2B                 0.032   bromodomain adjacent to zinc finger domain, 2B [Homo...
SSRP1                 0.027   structure specific recognition protein 1 
TPR                   0.025   nuclear pore complex-associated protein TPR 
C11orf51              0.025   hypothetical protein LOC25906 
ZBTB7C                0.025   zinc finger and BTB domain containing 7C 
HRC                   0.025   histidine rich calcium binding protein precursor [Hom...
MYT1L                 0.025   myelin transcription factor 1-like 
LOC646817             0.024   PREDICTED: similar to SET translocation 
LOC646817             0.024   PREDICTED: similar to SET translocation 
LOC646817             0.024   PREDICTED: similar to SET translocation 
KIAA1429              0.024   hypothetical protein LOC25962 isoform 1 
KIAA1429              0.024   hypothetical protein LOC25962 isoform 2 
MDN1                  0.024   MDN1, midasin homolog 
MAK16                 0.024   MAK16 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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