Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4759012
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4759012 RAB9A, member RAS oncogene family [Homo sapiens]
(201 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4759012 RAB9A, member RAS oncogene family [Homo sapiens] 413 e-116
gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens] 327 3e-90
gi|34147513 RAB7, member RAS oncogene family [Homo sapiens] 208 3e-54
gi|38490537 RAB7B, member RAS oncogene family [Homo sapiens] 144 4e-35
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 142 2e-34
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 134 5e-32
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 130 8e-31
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 130 8e-31
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 130 8e-31
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 129 2e-30
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 128 4e-30
gi|208609962 RAB7, member RAS oncogene family-like 1 isoform 1 [... 127 5e-30
gi|4506375 RAB7, member RAS oncogene family-like 1 isoform 1 [Ho... 127 5e-30
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 127 5e-30
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 127 6e-30
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 127 6e-30
gi|116812567 RAB25 [Homo sapiens] 125 2e-29
gi|16933567 mel transforming oncogene [Homo sapiens] 125 3e-29
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens] 124 4e-29
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens] 123 9e-29
gi|7661922 RAB21, member RAS oncogene family [Homo sapiens] 122 2e-28
gi|19923483 GTPase Rab14 [Homo sapiens] 122 3e-28
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens] 121 3e-28
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 120 8e-28
gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens] 119 1e-27
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 119 1e-27
gi|34485711 Ras-related protein Rab-27A [Homo sapiens] 119 2e-27
gi|34485709 Ras-related protein Rab-27A [Homo sapiens] 119 2e-27
gi|34485706 Ras-related protein Rab-27A [Homo sapiens] 119 2e-27
gi|19923264 Ras-related protein Rab-27A [Homo sapiens] 119 2e-27
>gi|4759012 RAB9A, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 413 bits (1062), Expect = e-116
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI 60
MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI
Sbjct: 1 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI 60
Query: 61 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV 120
WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV
Sbjct: 61 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV 120
Query: 121 ILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
ILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD
Sbjct: 121 ILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 181 HLIQTDTVNLHRKPKPSSSCC 201
HLIQTDTVNLHRKPKPSSSCC
Sbjct: 181 HLIQTDTVNLHRKPKPSSSCC 201
>gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 327 bits (839), Expect = 3e-90
Identities = 153/201 (76%), Positives = 175/201 (87%)
Query: 1 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI 60
M+GKS L KVILLGDGGVGKSSLMNRYVTNKFD+Q FHTIGVEFLN+DLEVDG FVT+QI
Sbjct: 1 MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQI 60
Query: 61 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV 120
WDTAGQERF+SLRTPFYRG+DCCLLTFSVDD QSF+NL NW+KEFIYYADVK+PE FPFV
Sbjct: 61 WDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFV 120
Query: 121 ILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
+LGNK+D +RQV+TEEAQ WC +NGDYPY ETSAKD TNV AFEEAVR+VLA E++ +
Sbjct: 121 VLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE 180
Query: 181 HLIQTDTVNLHRKPKPSSSCC 201
H + T++L+ K SSCC
Sbjct: 181 HCMLGHTIDLNSGSKAGSSCC 201
>gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 208 bits (529), Expect = 3e-54
Identities = 98/173 (56%), Positives = 122/173 (70%)
Query: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
K L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K++ VD VTMQIWDT
Sbjct: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64
Query: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
AGQERF+SL FYRG+DCC+L F V +F+ L +W+ EF+ A ++PE+FPFV+LG
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124
Query: 124 NKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATE 176
NKID+ RQV+T+ AQAWC + PYFETSAK+A NV AF+ R L E
Sbjct: 125 NKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|38490537 RAB7B, member RAS oncogene family [Homo sapiens]
Length = 199
Score = 144 bits (364), Expect = 4e-35
Identities = 83/195 (42%), Positives = 119/195 (61%), Gaps = 8/195 (4%)
Query: 9 KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQER 68
K+I++G GVGK+SL ++YV F + T+G L+K + + + +QIWDT GQER
Sbjct: 10 KLIIVGAIGVGKTSLPHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWDTGGQER 69
Query: 69 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDI 128
FRS+ + FY+GSD C+L F V D +SF+ L W+ + + V +S+P V+LGNKID+
Sbjct: 70 FRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGD-VLAKIVPMEQSYPMVLLGNKIDL 128
Query: 129 SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDR--SDHLIQTD 186
++R+V E AQ WCR+ D PYFE SAK+ NV AFE R L+ +HL T+
Sbjct: 129 ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRYQSILENHL--TE 185
Query: 187 TVNLHRKPKPSSSCC 201
++ L P S S C
Sbjct: 186 SIKL--SPDQSRSRC 198
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 142 bits (358), Expect = 2e-34
Identities = 80/208 (38%), Positives = 124/208 (59%), Gaps = 18/208 (8%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFKV+L+GD GVGKS+L++R+ N+F+ + TIGVEF + ++VDG + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
ER+R++ + +YRG+ LL + + +++N+ W KE +AD + +++GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKS 126
Query: 127 DISE-RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFE---EAVRRVLATEDRSDH- 181
D+ R V T+EA+A+ NG + ETSA D+TNV AAF+ + R+++ + SD
Sbjct: 127 DLRHLRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRR 185
Query: 182 ----LIQTDTVNLHRKP----KPSSSCC 201
+ V +H P KP CC
Sbjct: 186 ENDMSPSNNVVPIHVPPTTENKPKVQCC 213
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 134 bits (337), Expect = 5e-32
Identities = 68/167 (40%), Positives = 108/167 (64%), Gaps = 6/167 (3%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFKV+L+GD GVGKS+L++R+ N+F+ + TIGVEF + ++VDG + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
ER+R++ + +YRG+ LL + + +++N+ W KE +AD + +++GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKS 126
Query: 127 DISE-RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRV 172
D+ R V T+EA+A+ N + + ETSA D+TNV AF+ + +
Sbjct: 127 DLRHLRAVPTDEARAFAEKN-NLSFIETSALDSTNVEEAFKNILTEI 172
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 130 bits (327), Expect = 8e-31
Identities = 64/168 (38%), Positives = 106/168 (63%), Gaps = 6/168 (3%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFK++L+GD GVGK+ L+ R+ + F+ TIG++F + ++++G + +Q+WDTAGQ
Sbjct: 132 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 191
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
ERF+++ T +YRG+ +L + + D +SF+N+ NW K + A ++LGNK
Sbjct: 192 ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASA----GVEHLLLGNKC 247
Query: 127 DI-SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173
D+ ++R+V E+A R++G +FETSAK + NV AF R +L
Sbjct: 248 DMEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDIL 294
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 130 bits (327), Expect = 8e-31
Identities = 64/168 (38%), Positives = 106/168 (63%), Gaps = 6/168 (3%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFK++L+GD GVGK+ L+ R+ + F+ TIG++F + ++++G + +Q+WDTAGQ
Sbjct: 132 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 191
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
ERF+++ T +YRG+ +L + + D +SF+N+ NW K + A ++LGNK
Sbjct: 192 ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASA----GVEHLLLGNKC 247
Query: 127 DI-SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173
D+ ++R+V E+A R++G +FETSAK + NV AF R +L
Sbjct: 248 DMEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDIL 294
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 130 bits (327), Expect = 8e-31
Identities = 64/168 (38%), Positives = 106/168 (63%), Gaps = 6/168 (3%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFK++L+GD GVGK+ L+ R+ + F+ TIG++F + ++++G + +Q+WDTAGQ
Sbjct: 132 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 191
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
ERF+++ T +YRG+ +L + + D +SF+N+ NW K + A ++LGNK
Sbjct: 192 ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASA----GVEHLLLGNKC 247
Query: 127 DI-SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173
D+ ++R+V E+A R++G +FETSAK + NV AF R +L
Sbjct: 248 DMEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDIL 294
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 129 bits (323), Expect = 2e-30
Identities = 66/170 (38%), Positives = 108/170 (63%), Gaps = 10/170 (5%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFK++L+GD GVGK+ L+ R+ + F+ TIG++F + ++++G + +Q+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPES--FPFVILGN 124
ERF+++ T +YRG+ +L + + D +SF+N+ NW K +KE S ++LGN
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMK------SIKENASAGVERLLLGN 121
Query: 125 KIDI-SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173
K D+ ++R+V E+A R++G +FETSAK + NV AF R +L
Sbjct: 122 KCDMEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDIL 170
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 128 bits (321), Expect = 4e-30
Identities = 70/175 (40%), Positives = 108/175 (61%), Gaps = 10/175 (5%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFK++L+GD GVGK+ L+ R+ + F+T TIG++F + +E+DG + +QIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQ 67
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYA--DVKEPESFPFVILGN 124
ERFR++ T +YRG+ +L + + + +SF N+ NW + +A DV+ +ILGN
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVER------MILGN 121
Query: 125 KIDISE-RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDR 178
K D+++ RQVS E + D G + ETSAK + NV AF R ++ +R
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYG-IKFLETSAKSSANVEEAFFTLARDIMTKLNR 175
>gi|208609962 RAB7, member RAS oncogene family-like 1 isoform 1
[Homo sapiens]
Length = 203
Score = 127 bits (320), Expect = 5e-30
Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 4/204 (1%)
Query: 1 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLE-VDGHFVTMQ 59
M + LFKV+++GD VGK+SL+ RY + F T+GV+F K L+ D V +Q
Sbjct: 1 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQ 60
Query: 60 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF 119
+WD AGQERF S+ +YR + C++ F V ++ +F N WK++ + E P
Sbjct: 61 LWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC 120
Query: 120 VILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL--ATED 177
++L NK D+S VS ++ + ++NG + ETS K+ N+ A + +++ +TED
Sbjct: 121 LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED 180
Query: 178 RSDHLIQTDTVNLHRKPKPSSSCC 201
Q D +NL K S SCC
Sbjct: 181 IMSLSTQGDYINLQTK-SSSWSCC 203
>gi|4506375 RAB7, member RAS oncogene family-like 1 isoform 1 [Homo
sapiens]
Length = 203
Score = 127 bits (320), Expect = 5e-30
Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 4/204 (1%)
Query: 1 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLE-VDGHFVTMQ 59
M + LFKV+++GD VGK+SL+ RY + F T+GV+F K L+ D V +Q
Sbjct: 1 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQ 60
Query: 60 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF 119
+WD AGQERF S+ +YR + C++ F V ++ +F N WK++ + E P
Sbjct: 61 LWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPC 120
Query: 120 VILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL--ATED 177
++L NK D+S VS ++ + ++NG + ETS K+ N+ A + +++ +TED
Sbjct: 121 LLLANKCDLSPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED 180
Query: 178 RSDHLIQTDTVNLHRKPKPSSSCC 201
Q D +NL K S SCC
Sbjct: 181 IMSLSTQGDYINLQTK-SSSWSCC 203
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 127 bits (320), Expect = 5e-30
Identities = 74/197 (37%), Positives = 115/197 (58%), Gaps = 7/197 (3%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFK++L+G+ GVGK+ L+ R+ F TIGV+F+ K +E++G V +QIWDTAGQ
Sbjct: 9 LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
ERFRS+ +YR ++ +LT+ + +SF+ L W +E YA K V++GNKI
Sbjct: 69 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNK----VITVLVGNKI 124
Query: 127 DISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDHLIQTD 186
D++ER+ +++ + D Y ETSAK++ NV F + R L +E R + L+
Sbjct: 125 DLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACR-LISEARQNTLVNNV 183
Query: 187 TVNLHRKPKPSS--SCC 201
+ L + K S +CC
Sbjct: 184 SSPLPGEGKSISYLTCC 200
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 127 bits (319), Expect = 6e-30
Identities = 63/159 (39%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFK++L+GD GVGKS L+ R+ + + TIGV+F + +E+DG + +QIWDTAGQ
Sbjct: 11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
ERFR++ + +YRG+ ++ + V D +SF N+ W +E YA E+ +++GNK
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNKLLVGNKC 126
Query: 127 DISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
D++ ++V D+ P+ ETSAK+ATNV +F
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSF 165
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 127 bits (319), Expect = 6e-30
Identities = 63/159 (39%), Positives = 99/159 (62%), Gaps = 4/159 (2%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFK++L+GD GVGKS L+ R+ + + TIGV+F + +E+DG + +QIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
ERFR++ + +YRG+ ++ + V D +S+ N+ W +E YA E+ +++GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYAS----ENVNKLLVGNKS 123
Query: 127 DISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
D++ ++V D+ P+ ETSAK+ATNV AF
Sbjct: 124 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAF 162
>gi|116812567 RAB25 [Homo sapiens]
Length = 213
Score = 125 bits (314), Expect = 2e-29
Identities = 73/204 (35%), Positives = 121/204 (59%), Gaps = 14/204 (6%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
+FKV+L+G+ GVGK++L++R+ N+F TIGVEF + + + V QIWDTAG
Sbjct: 12 VFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGL 71
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
ER+R++ + +YRG+ LL F + Q++ + W KE +A+ + +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEA----TIVVMLVGNKS 127
Query: 127 DISE-RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLA-TEDRSDHLIQ 184
D+S+ R+V TEEA+ + +NG + ETSA D+TNV AFE ++ + A + + I+
Sbjct: 128 DLSQAREVPTEEARMFAENNG-LLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIR 186
Query: 185 TDTVNL-----HRKPKPSS--SCC 201
T+ + L ++P P +CC
Sbjct: 187 TNAITLGSAQAGQEPGPGEKRACC 210
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 125 bits (313), Expect = 3e-29
Identities = 69/175 (39%), Positives = 108/175 (61%), Gaps = 10/175 (5%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFK++L+GD GVGK+ ++ R+ + F++ TIG++F + +E+DG + +QIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYY--ADVKEPESFPFVILGN 124
ERFR++ T +YRG+ +L + + + +SF N+ NW + + ADV++ +ILGN
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEK------MILGN 121
Query: 125 KIDISE-RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDR 178
K D+++ RQVS E + D G + ETSAK NV AF R + A D+
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDIKAKMDK 175
>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 124 bits (312), Expect = 4e-29
Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 11/200 (5%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFK++++GD GVGKSSL+ R+ N F TIGV+F + +E++G V +QIWDTAGQ
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
ERFR++ + +YRG+ ++ + V ++SF N+ W E D +++GNK
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-----DVCRILVGNKN 122
Query: 127 DISERQ-VSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATED----RSDH 181
D ER+ V TE+A + G FETSAK+ NV F VL + +
Sbjct: 123 DDPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQ 181
Query: 182 LIQTDTVNLHRKPKPSSSCC 201
Q D V L + K CC
Sbjct: 182 QQQNDVVKLTKNSKRKKRCC 201
>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
Length = 206
Score = 123 bits (309), Expect = 9e-29
Identities = 71/194 (36%), Positives = 104/194 (53%), Gaps = 5/194 (2%)
Query: 9 KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQER 68
K++++G+ GVGKSSL+ R+ + FD +L TIGV+F K + VDG+ + IWDTAGQER
Sbjct: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
Query: 69 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDI 128
FR+L +YRG+ +L + V +F L NW E Y + + +++GNKID
Sbjct: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVN---MLVGNKIDK 126
Query: 129 SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDHLIQTDTV 188
R+V E + R + + E SAK V AFEE V +++ T + Q V
Sbjct: 127 ENREVDRNEGLKFARKH-SMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGV 185
Query: 189 NL-HRKPKPSSSCC 201
L HR+ C
Sbjct: 186 KLSHREEGQGGGAC 199
>gi|7661922 RAB21, member RAS oncogene family [Homo sapiens]
Length = 225
Score = 122 bits (306), Expect = 2e-28
Identities = 69/175 (39%), Positives = 100/175 (57%), Gaps = 6/175 (3%)
Query: 2 AGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIW 61
AG++ FKV+LLG+G VGK+SL+ RY NKF+ + T+ FL K L + G V + IW
Sbjct: 14 AGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 73
Query: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVI 121
DTAGQERF +L +YR S+ +L + + D SFQ + NW KE I
Sbjct: 74 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLG----NEICLCI 129
Query: 122 LGNKIDI-SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLAT 175
+GNKID+ ER VS +EA+++ G ++ TSAK + F + +R++ T
Sbjct: 130 VGNKIDLEKERHVSIQEAESYAESVG-AKHYHTSAKQNKGIEELFLDLCKRMIET 183
>gi|19923483 GTPase Rab14 [Homo sapiens]
Length = 215
Score = 122 bits (305), Expect = 3e-28
Identities = 65/169 (38%), Positives = 105/169 (62%), Gaps = 6/169 (3%)
Query: 5 SSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTA 64
S +FK I++GD GVGKS L++++ KF HTIGVEF + +EV G + +QIWDTA
Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTA 68
Query: 65 GQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGN 124
GQERFR++ +YRG+ L+ + + ++ +LS+W + ++ P + +++GN
Sbjct: 69 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD---ARNLTNPNTV-IILIGN 124
Query: 125 KIDI-SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRV 172
K D+ ++R V+ EEA+ + +NG + E SAK NV AF EA +++
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENG-LLFLEASAKTGENVEDAFLEAAKKI 172
>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 121 bits (304), Expect = 3e-28
Identities = 63/168 (37%), Positives = 104/168 (61%), Gaps = 6/168 (3%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFK +++G+ G GKS L+++++ KF HTIGVEF +K + V G +V +QIWDTAGQ
Sbjct: 13 LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQ 72
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
ERFRS+ +YRG+ LL + + +++ L+NW + A + ++ ++ GNK
Sbjct: 73 ERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTD----ARMLASQNIVIILCGNKK 128
Query: 127 DI-SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173
D+ ++R+V+ EA + ++N + + ETSA NV AF + R++L
Sbjct: 129 DLDADREVTFLEASRFAQEN-ELMFLETSALTGENVEEAFVQCARKIL 175
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 120 bits (301), Expect = 8e-28
Identities = 76/200 (38%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFH-TIGVEFLNKDLEVDGHFVTMQIWDTAG 65
L K IL+GD GVGK+SL+ ++ KF F T+G+ F NK + VDG V +QIWDTAG
Sbjct: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
Query: 66 QERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNK 125
QERFRS+ +YR + LL + + + SF N+ W E YA ++LGNK
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQ----RDVVIMLLGNK 137
Query: 126 IDI-SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDHLIQ 184
D+ SER + +E+ + R+ G P+ ETSAK NV AF + + + R+ H
Sbjct: 138 ADMSSERVIRSEDGETLAREYG-VPFLETSAKTGMNVELAFLAIAKEL---KYRAGHQAD 193
Query: 185 TDTVNLH---RKPKPSSSCC 201
+ + K SSCC
Sbjct: 194 EPSFQIRDYVESQKKRSSCC 213
>gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]
Length = 213
Score = 119 bits (299), Expect = 1e-27
Identities = 69/179 (38%), Positives = 106/179 (59%), Gaps = 6/179 (3%)
Query: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVD-GHFVTMQIWDTAGQ 66
F++I++GD VGKS L+ R+ +F T+GV+F ++ +E++ G + +QIWDTAGQ
Sbjct: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQ 68
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
ERFRS+ +YR S LL F + + +SFQN+ W +E + +P FV++G+K
Sbjct: 69 ERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHV---QPYQIVFVLVGHKC 125
Query: 127 DI-SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDHLIQ 184
D+ ++RQV+ EA+ G Y ETSA+DA NV AF + R + R + IQ
Sbjct: 126 DLDTQRQVTRHEAEKLAAAYG-MKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQ 183
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 119 bits (299), Expect = 1e-27
Identities = 62/180 (34%), Positives = 106/180 (58%), Gaps = 8/180 (4%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66
LFK++L+GD GVGK+ ++ R+ + F+T TIG++F K +E+ G + +QIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126
ERF ++ T +YRG+ +L + + + +SF+N+S W + +A+ E ++LGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNKC 124
Query: 127 DISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF----EEAVRRVLATEDRSDHL 182
D+ +++V + +FETSAK N+ AF E+ +R+ E S+++
Sbjct: 125 DMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENV 184
>gi|34485711 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 119 bits (298), Expect = 2e-27
Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 13/182 (7%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVD----------GHFV 56
L K + LGD GVGK+S++ +Y KF+++ T+G++F K + G +
Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRI 68
Query: 57 TMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPES 116
+Q+WDTAGQERFRSL T F+R + LL F + + QSF N+ NW + +A + P+
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD- 127
Query: 117 FPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATE 176
V+ GNK D+ +++V EE + PYFETSA + TN++ A E + ++
Sbjct: 128 --IVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRM 185
Query: 177 DR 178
+R
Sbjct: 186 ER 187
>gi|34485709 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 119 bits (298), Expect = 2e-27
Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 13/182 (7%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVD----------GHFV 56
L K + LGD GVGK+S++ +Y KF+++ T+G++F K + G +
Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRI 68
Query: 57 TMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPES 116
+Q+WDTAGQERFRSL T F+R + LL F + + QSF N+ NW + +A + P+
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD- 127
Query: 117 FPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATE 176
V+ GNK D+ +++V EE + PYFETSA + TN++ A E + ++
Sbjct: 128 --IVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRM 185
Query: 177 DR 178
+R
Sbjct: 186 ER 187
>gi|34485706 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 119 bits (298), Expect = 2e-27
Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 13/182 (7%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVD----------GHFV 56
L K + LGD GVGK+S++ +Y KF+++ T+G++F K + G +
Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRI 68
Query: 57 TMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPES 116
+Q+WDTAGQERFRSL T F+R + LL F + + QSF N+ NW + +A + P+
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD- 127
Query: 117 FPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATE 176
V+ GNK D+ +++V EE + PYFETSA + TN++ A E + ++
Sbjct: 128 --IVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRM 185
Query: 177 DR 178
+R
Sbjct: 186 ER 187
>gi|19923264 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 119 bits (298), Expect = 2e-27
Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 13/182 (7%)
Query: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVD----------GHFV 56
L K + LGD GVGK+S++ +Y KF+++ T+G++F K + G +
Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRI 68
Query: 57 TMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPES 116
+Q+WDTAGQERFRSL T F+R + LL F + + QSF N+ NW + +A + P+
Sbjct: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD- 127
Query: 117 FPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATE 176
V+ GNK D+ +++V EE + PYFETSA + TN++ A E + ++
Sbjct: 128 --IVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRM 185
Query: 177 DR 178
+R
Sbjct: 186 ER 187
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,299,761
Number of Sequences: 37866
Number of extensions: 285361
Number of successful extensions: 1254
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 821
Number of HSP's gapped (non-prelim): 252
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.